Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP17_F_C04
(873 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U76248-1|AAC51908.1| 324|Homo sapiens hSIAH2 protein. 42 0.002
U76247-1|AAC51907.1| 282|Homo sapiens hSIAH1 protein. 42 0.002
U63295-1|AAC12950.1| 282|Homo sapiens seven in absentia homolog... 42 0.002
EF026094-1|ABK15529.1| 195|Homo sapiens SIAH1 short protein pro... 42 0.002
BX647064-1|CAE46191.1| 282|Homo sapiens hypothetical protein pr... 42 0.002
BC044920-1|AAH44920.1| 282|Homo sapiens SIAH1 protein protein. 42 0.002
BC042550-1|AAH42550.1| 313|Homo sapiens seven in absentia homol... 42 0.002
BC035562-1|AAH35562.1| 282|Homo sapiens seven in absentia homol... 42 0.002
AJ400626-1|CAC35542.1| 282|Homo sapiens SIAH1 protein protein. 42 0.002
Y15268-1|CAA75557.1| 324|Homo sapiens Siah2 protein protein. 42 0.003
BC013082-1|AAH13082.1| 324|Homo sapiens seven in absentia homol... 42 0.003
AK223565-1|BAD97285.1| 324|Homo sapiens seven in absentia homol... 42 0.003
AL359734-1|CAI41259.1| 277|Homo sapiens seven in absentia homol... 40 0.009
BC113014-1|AAI13015.1| 245|Homo sapiens ring finger protein 151... 36 0.14
BC029501-1|AAH29501.2| 244|Homo sapiens RNF151 protein protein. 36 0.14
U21092-1|AAC50112.1| 568|Homo sapiens CD40 receptor associated ... 31 4.1
L38509-1|AAA68195.1| 543|Homo sapiens CD40-associated protein p... 31 4.1
BC024267-1|AAH24267.1| 594|Homo sapiens TRAF7 protein protein. 31 4.1
AY569455-1|AAS68363.1| 670|Homo sapiens TRAF7 protein. 31 4.1
U15637-1|AAA56753.1| 567|Homo sapiens CD40 binding protein prot... 31 7.2
>U76248-1|AAC51908.1| 324|Homo sapiens hSIAH2 protein.
Length = 324
Score = 42.3 bits (95), Expect = 0.002
Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Frame = +3
Query: 627 PAAPCLALQRLVNDLMLPCRNYRRGCTELLTAITRVKHEEECKFDTMMCPITANCC--SV 800
P+ LA++++ + ++ PC+ GC+ L + +HE+ C++ CP C
Sbjct: 120 PSIRNLAMEKVASAVLFPCKYATTGCSLTLHHTEKPEHEDICEYRPYSCPCPGASCKWQG 179
Query: 801 PFEELSSHLQXTHNIIAVYSQ 863
E + SHL H I +
Sbjct: 180 SLEAVMSHLMHAHKSITTLQE 200
>U76247-1|AAC51907.1| 282|Homo sapiens hSIAH1 protein.
Length = 282
Score = 42.3 bits (95), Expect = 0.002
Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Frame = +3
Query: 642 LALQRLVNDLMLPCRNYRRGCTELLTAITRVKHEEECKFDTMMCPITANCC--SVPFEEL 815
LA++++ N ++ PC+ GC L + HEE C+F CP C + +
Sbjct: 85 LAMEKVANSVLFPCKYASSGCEITLPHTEKADHEELCEFRPYSCPCPGASCKWQGSLDAV 144
Query: 816 SSHLQXTHNII 848
HL H I
Sbjct: 145 MPHLMHQHKSI 155
>U63295-1|AAC12950.1| 282|Homo sapiens seven in absentia homolog
protein.
Length = 282
Score = 42.3 bits (95), Expect = 0.002
Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Frame = +3
Query: 642 LALQRLVNDLMLPCRNYRRGCTELLTAITRVKHEEECKFDTMMCPITANCC--SVPFEEL 815
LA++++ N ++ PC+ GC L + HEE C+F CP C + +
Sbjct: 85 LAMEKVANSVLFPCKYASSGCEITLPHTEKADHEELCEFRPYSCPCPGASCKWQGSLDAV 144
Query: 816 SSHLQXTHNII 848
HL H I
Sbjct: 145 MPHLMHQHKSI 155
>EF026094-1|ABK15529.1| 195|Homo sapiens SIAH1 short protein
protein.
Length = 195
Score = 42.3 bits (95), Expect = 0.002
Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Frame = +3
Query: 642 LALQRLVNDLMLPCRNYRRGCTELLTAITRVKHEEECKFDTMMCPITANCC--SVPFEEL 815
LA++++ N ++ PC+ GC L + HEE C+F CP C + +
Sbjct: 85 LAMEKVANSVLFPCKYASSGCEITLPHTEKADHEELCEFRPYSCPCPGASCKWQGSLDAV 144
Query: 816 SSHLQXTHNII 848
HL H I
Sbjct: 145 MPHLMHQHKSI 155
>BX647064-1|CAE46191.1| 282|Homo sapiens hypothetical protein
protein.
Length = 282
Score = 42.3 bits (95), Expect = 0.002
Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Frame = +3
Query: 642 LALQRLVNDLMLPCRNYRRGCTELLTAITRVKHEEECKFDTMMCPITANCC--SVPFEEL 815
LA++++ N ++ PC+ GC L + HEE C+F CP C + +
Sbjct: 85 LAMEKVANSVLFPCKYASSGCEITLPHTEKADHEELCEFRPYSCPCPGASCKWQGSLDAV 144
Query: 816 SSHLQXTHNII 848
HL H I
Sbjct: 145 MPHLMHQHKSI 155
>BC044920-1|AAH44920.1| 282|Homo sapiens SIAH1 protein protein.
Length = 282
Score = 42.3 bits (95), Expect = 0.002
Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Frame = +3
Query: 642 LALQRLVNDLMLPCRNYRRGCTELLTAITRVKHEEECKFDTMMCPITANCC--SVPFEEL 815
LA++++ N ++ PC+ GC L + HEE C+F CP C + +
Sbjct: 85 LAMEKVANSVLFPCKYASSGCEITLPHTEKADHEELCEFRPYSCPCPGASCKWQGSLDAV 144
Query: 816 SSHLQXTHNII 848
HL H I
Sbjct: 145 MPHLMHQHKSI 155
>BC042550-1|AAH42550.1| 313|Homo sapiens seven in absentia homolog
1 (Drosophila) protein.
Length = 313
Score = 42.3 bits (95), Expect = 0.002
Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Frame = +3
Query: 642 LALQRLVNDLMLPCRNYRRGCTELLTAITRVKHEEECKFDTMMCPITANCC--SVPFEEL 815
LA++++ N ++ PC+ GC L + HEE C+F CP C + +
Sbjct: 116 LAMEKVANSVLFPCKYASSGCEITLPHTEKADHEELCEFRPYSCPCPGASCKWQGSLDAV 175
Query: 816 SSHLQXTHNII 848
HL H I
Sbjct: 176 MPHLMHQHKSI 186
>BC035562-1|AAH35562.1| 282|Homo sapiens seven in absentia homolog
1 (Drosophila) protein.
Length = 282
Score = 42.3 bits (95), Expect = 0.002
Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Frame = +3
Query: 642 LALQRLVNDLMLPCRNYRRGCTELLTAITRVKHEEECKFDTMMCPITANCC--SVPFEEL 815
LA++++ N ++ PC+ GC L + HEE C+F CP C + +
Sbjct: 85 LAMEKVANSVLFPCKYASSGCEITLPHTEKADHEELCEFRPYSCPCPGASCKWQGSLDAV 144
Query: 816 SSHLQXTHNII 848
HL H I
Sbjct: 145 MPHLMHQHKSI 155
>AJ400626-1|CAC35542.1| 282|Homo sapiens SIAH1 protein protein.
Length = 282
Score = 42.3 bits (95), Expect = 0.002
Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Frame = +3
Query: 642 LALQRLVNDLMLPCRNYRRGCTELLTAITRVKHEEECKFDTMMCPITANCC--SVPFEEL 815
LA++++ N ++ PC+ GC L + HEE C+F CP C + +
Sbjct: 85 LAMEKVANSVLFPCKYASSGCEITLPHTEKADHEELCEFRPYSCPCPGASCKWQGSLDAV 144
Query: 816 SSHLQXTHNII 848
HL H I
Sbjct: 145 MPHLMHQHKSI 155
>Y15268-1|CAA75557.1| 324|Homo sapiens Siah2 protein protein.
Length = 324
Score = 41.9 bits (94), Expect = 0.003
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Frame = +3
Query: 627 PAAPCLALQRLVNDLMLPCRNYRRGCTELLTAITRVKHEEECKFDTMMCPITANCC--SV 800
P+ LA++++ + ++ PC+ GC+ L + +HE+ C++ CP C
Sbjct: 120 PSIRNLAMEKVASAVLFPCKYATTGCSLTLHHTEKPEHEDICEYRPYSCPCPGASCKWQG 179
Query: 801 PFEELSSHLQXTHNII 848
E + SHL H I
Sbjct: 180 SLEAVMSHLMHAHKSI 195
>BC013082-1|AAH13082.1| 324|Homo sapiens seven in absentia homolog
2 (Drosophila) protein.
Length = 324
Score = 41.9 bits (94), Expect = 0.003
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Frame = +3
Query: 627 PAAPCLALQRLVNDLMLPCRNYRRGCTELLTAITRVKHEEECKFDTMMCPITANCC--SV 800
P+ LA++++ + ++ PC+ GC+ L + +HE+ C++ CP C
Sbjct: 120 PSIRNLAMEKVASAVLFPCKYATTGCSLTLHHTEKPEHEDICEYRPYSCPCPGASCKWQG 179
Query: 801 PFEELSSHLQXTHNII 848
E + SHL H I
Sbjct: 180 SLEAVMSHLMHAHKSI 195
>AK223565-1|BAD97285.1| 324|Homo sapiens seven in absentia homolog
2 variant protein.
Length = 324
Score = 41.9 bits (94), Expect = 0.003
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Frame = +3
Query: 627 PAAPCLALQRLVNDLMLPCRNYRRGCTELLTAITRVKHEEECKFDTMMCPITANCC--SV 800
P+ LA++++ + ++ PC+ GC+ L + +HE+ C++ CP C
Sbjct: 120 PSIRNLAMEKVASAVLFPCKYATTGCSLTLHHTEKPEHEDICEYRPYSCPCPGASCKWQG 179
Query: 801 PFEELSSHLQXTHNII 848
E + SHL H I
Sbjct: 180 SLEAVMSHLMHAHKSI 195
>AL359734-1|CAI41259.1| 277|Homo sapiens seven in absentia homolog
1-like (Drosophila) protein.
Length = 277
Score = 40.3 bits (90), Expect = 0.009
Identities = 20/71 (28%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Frame = +3
Query: 642 LALQRLVNDLMLPCRNYRRGCTELLTAITRVKHEEECKFDTMMCPITANCC--SVPFEEL 815
LA++++ ++ PCR GC L + HEE C+F CP C + +
Sbjct: 80 LAMEKVAKFVLFPCRYACLGCEITLPHTEKADHEEVCEFRLYSCPCPGTVCKWQGTMDAI 139
Query: 816 SSHLQXTHNII 848
HL H I
Sbjct: 140 MPHLTKMHEYI 150
>BC113014-1|AAI13015.1| 245|Homo sapiens ring finger protein 151
protein.
Length = 245
Score = 36.3 bits (80), Expect = 0.14
Identities = 17/61 (27%), Positives = 26/61 (42%)
Frame = +3
Query: 648 LQRLVNDLMLPCRNYRRGCTELLTAITRVKHEEECKFDTMMCPITANCCSVPFEELSSHL 827
L++ + L + C+N GC R H++ C F+ CP VP L+ H
Sbjct: 72 LRKTIGRLEVKCKNADAGCIVTCPLAHRKGHQDSCPFELTACPNEGCTSQVPRGTLAEHR 131
Query: 828 Q 830
Q
Sbjct: 132 Q 132
>BC029501-1|AAH29501.2| 244|Homo sapiens RNF151 protein protein.
Length = 244
Score = 36.3 bits (80), Expect = 0.14
Identities = 17/61 (27%), Positives = 26/61 (42%)
Frame = +3
Query: 648 LQRLVNDLMLPCRNYRRGCTELLTAITRVKHEEECKFDTMMCPITANCCSVPFEELSSHL 827
L++ + L + C+N GC R H++ C F+ CP VP L+ H
Sbjct: 71 LRKTIGRLEVKCKNADAGCIVTCPLAHRKGHQDSCPFELTACPNEGCTSQVPRGTLAEHR 130
Query: 828 Q 830
Q
Sbjct: 131 Q 131
>U21092-1|AAC50112.1| 568|Homo sapiens CD40 receptor associated
factor 1 protein.
Length = 568
Score = 31.5 bits (68), Expect = 4.1
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Frame = +3
Query: 651 QRLVNDLMLPCRNYRRGCTELLTAITRVKH-EEECKFDTMMCPITANCC-SVPFEELSSH 824
+R + L + CRN RGC E LT + H + +C F+ + C + +C V ++L H
Sbjct: 107 KREILALQIYCRNESRGCAEQLTLGHLLVHLKNDCHFEELPC-VRPDCKEKVLRKDLRDH 165
Query: 825 LQ 830
++
Sbjct: 166 VE 167
>L38509-1|AAA68195.1| 543|Homo sapiens CD40-associated protein
protein.
Length = 543
Score = 31.5 bits (68), Expect = 4.1
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Frame = +3
Query: 651 QRLVNDLMLPCRNYRRGCTELLTAITRVKH-EEECKFDTMMCPITANCC-SVPFEELSSH 824
+R + L + CRN RGC E LT + H + +C F+ + C + +C V ++L H
Sbjct: 107 KREILALQIYCRNESRGCAEQLTLGHLLVHLKNDCHFEELPC-VRPDCKEKVLRKDLRDH 165
Query: 825 LQ 830
++
Sbjct: 166 VE 167
>BC024267-1|AAH24267.1| 594|Homo sapiens TRAF7 protein protein.
Length = 594
Score = 31.5 bits (68), Expect = 4.1
Identities = 15/56 (26%), Positives = 25/56 (44%)
Frame = +3
Query: 696 RGCTELLTAITRVKHEEECKFDTMMCPITANCCSVPFEELSSHLQXTHNIIAVYSQ 863
RGC + R HE C + + CP +C + L +HL+ +I +S+
Sbjct: 132 RGCPFTIKLSARKDHEGSCDYRPVRCPNNPSCPPLLRMNLEAHLKECEHIKCPHSK 187
>AY569455-1|AAS68363.1| 670|Homo sapiens TRAF7 protein.
Length = 670
Score = 31.5 bits (68), Expect = 4.1
Identities = 15/56 (26%), Positives = 25/56 (44%)
Frame = +3
Query: 696 RGCTELLTAITRVKHEEECKFDTMMCPITANCCSVPFEELSSHLQXTHNIIAVYSQ 863
RGC + R HE C + + CP +C + L +HL+ +I +S+
Sbjct: 208 RGCPFTIKLSARKDHEGSCDYRPVRCPNNPSCPPLLRMNLEAHLKECEHIKCPHSK 263
>U15637-1|AAA56753.1| 567|Homo sapiens CD40 binding protein
protein.
Length = 567
Score = 30.7 bits (66), Expect = 7.2
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +3
Query: 651 QRLVNDLMLPCRNYRRGCTELLTAITRVKHEEECKFDTMMCPITANCC-SVPFEELSSHL 827
+R + L + CRN RGC E L V + +C F+ + C + +C V ++L H+
Sbjct: 107 KREILALQIYCRNESRGCAEQLMLGHLVHLKNDCHFEELPC-VRPDCKEKVLRKDLRDHV 165
Query: 828 Q 830
+
Sbjct: 166 E 166
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,451,088
Number of Sequences: 237096
Number of extensions: 2132705
Number of successful extensions: 5016
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 4787
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5016
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11104084400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -