Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_B19
         (922 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0955 + 29168771-29170507                                         29   6.9  
07_03_0744 + 21121757-21122202,21122316-21122737,21122992-211231...    28   9.1  

>03_05_0955 + 29168771-29170507
          Length = 578

 Score = 28.7 bits (61), Expect = 6.9
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = +1

Query: 181 QQTVRRYHGESHFKPPTMDELPVPKGSWQSHHDANQR 291
           QQ  +R+H   H  PP   +   P    Q HH  +Q+
Sbjct: 26  QQQQQRHHHHHHLPPPPPPQSMAPHHHQQKHHHHHQQ 62


>07_03_0744 +
           21121757-21122202,21122316-21122737,21122992-21123117,
           21123198-21123319,21123413-21123623,21123955-21124192,
           21124284-21124431,21124547-21124879
          Length = 681

 Score = 28.3 bits (60), Expect = 9.1
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = -1

Query: 292 DVGWHHGATAMSLWALVIHPW 230
           DVGW + A A  L ALV H W
Sbjct: 163 DVGWFNAAVAKILAALVEHTW 183


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,744,952
Number of Sequences: 37544
Number of extensions: 271463
Number of successful extensions: 607
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 599
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 607
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2624101760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)