Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_B16
         (883 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             28   0.13 
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          24   2.1  
AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.          24   2.1  
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          23   3.7  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      23   3.7  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    23   3.7  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    23   4.9  

>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 27.9 bits (59), Expect = 0.13
 Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
 Frame = +3

Query: 465 PPPPPEKVRDAEEQITIDLGDEYEQALGTASQEEIIDLAAILGFHSMMNQD-QYHASLLN 641
           PPP  ++V D E       G E E+ +  A  + ++ L  ++ F ++         +LL 
Sbjct: 689 PPPQVDEVDDKELS-----GAEEEKEVEKALLKPLLSLEDLVRFSTLEGSGGDSLRTLLQ 743

Query: 642 KGQPVGLGWDGITKA 686
           +GQ  G  W G+  A
Sbjct: 744 RGQETGAEWPGLEHA 758


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 11/33 (33%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = +1

Query: 280 DPDDNFL-PPSQRNNYACEKDPTGPLNRKKLIE 375
           D D+N + PP + +    + D  GPL+ K  +E
Sbjct: 423 DHDENMIIPPKKSDMSNMQSDDGGPLSLKNKVE 455


>AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.
          Length = 147

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +3

Query: 213 SGRGRAPVQAHSRRTDHAGKGG 278
           S  G +PV +HS    H G GG
Sbjct: 69  SSSGDSPVSSHSSNGIHTGFGG 90


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -1

Query: 703 NTLGLVALVMPSHPSPTGW 647
           N +G V+ V   HP PTG+
Sbjct: 276 NDMGEVSYVSLDHPIPTGY 294


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -1

Query: 703 NTLGLVALVMPSHPSPTGW 647
           N +G V+ V   HP PTG+
Sbjct: 276 NDMGEVSYVSLDHPIPTGY 294


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 11/16 (68%), Positives = 11/16 (68%)
 Frame = -2

Query: 216 HFVVCRQLPPVQFGRG 169
           HFVV RQL  VQ G G
Sbjct: 298 HFVVDRQLELVQLGVG 313


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 22.6 bits (46), Expect = 4.9
 Identities = 11/37 (29%), Positives = 15/37 (40%)
 Frame = +3

Query: 456 KWIPPPPPEKVRDAEEQITIDLGDEYEQALGTASQEE 566
           +++PPPP     D   Q   DL  +         QEE
Sbjct: 318 EFLPPPPNLDYHDYSRQFPRDLTTQTVSTTADVLQEE 354


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.315    0.132    0.390 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 230,075
Number of Sequences: 438
Number of extensions: 5673
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28644972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)