Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP17_F_B15
(879 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1223.06 |tea1|alp8|cell end marker Tea1|Schizosaccharomyces ... 95 2e-20
SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces pom... 57 3e-09
SPBC21.05c |ral2||Ras guanyl-nucleotide exchange factor Ral2 |Sc... 48 2e-06
SPCC1919.12c |||aminopeptidase |Schizosaccharomyces pombe|chr 3|... 30 0.38
SPAC630.09c |mug58||glycerate kinase |Schizosaccharomyces pombe|... 29 0.66
SPAC12G12.09 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 27 3.5
SPCC1223.09 |||uricase |Schizosaccharomyces pombe|chr 3|||Manual 27 4.7
SPAC959.06c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 26 8.1
SPAC22E12.02 |||RNA-binding protein|Schizosaccharomyces pombe|ch... 26 8.1
>SPCC1223.06 |tea1|alp8|cell end marker Tea1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1147
Score = 94.7 bits (225), Expect = 2e-20
Identities = 57/183 (31%), Positives = 87/183 (47%), Gaps = 5/183 (2%)
Frame = +1
Query: 205 RVNHAAVCIGDKIYSFGGYCSTEEYKDWEPIPVHILNTATLRWTSVNYKRSDVVPFQRYG 384
R+ HA++ IG+ FGG + + D + +++LNT++L W N S P RYG
Sbjct: 134 RLGHASILIGNAFIVFGG-LTNHDVADRQDNSLYLLNTSSLVWQKAN--ASGARPSGRYG 190
Query: 385 HTAVAYGHKVYMWGGRNNAVACDTLSCFDTKKL-----EWSTPQVTGMVPYAKDGHSACV 549
HT G K+ ++GGR + L CFD L W V P A+ GH A
Sbjct: 191 HTISCLGSKICLFGGRLLDYYFNDLVCFDLNNLNTSDSRWELASVVNDPPPARAGHVAFT 250
Query: 550 IKNKMYIFGGFEYLTDQYSQEVHCLDLDTLQWTFIDAQGTPPSHRDFHTAVAVGDRMFVF 729
+K+YIFGG + + ++ C W+ ++ G P+ R H A V ++VF
Sbjct: 251 FSDKLYIFGGTD--GANFFNDLWCYHPKQSAWSKVETFGVAPNPRAGHAASVVEGILYVF 308
Query: 730 GGK 738
GG+
Sbjct: 309 GGR 311
Score = 91.1 bits (216), Expect = 2e-19
Identities = 55/201 (27%), Positives = 90/201 (44%), Gaps = 3/201 (1%)
Frame = +1
Query: 145 LFLNSIATMKWTVHIEGGPM---RVNHAAVCIGDKIYSFGGYCSTEEYKDWEPIPVHILN 315
L+L + +++ W G R H C+G KI FGG + D ++ LN
Sbjct: 165 LYLLNTSSLVWQKANASGARPSGRYGHTISCLGSKICLFGGRLLDYYFNDLVCFDLNNLN 224
Query: 316 TATLRWTSVNYKRSDVVPFQRYGHTAVAYGHKVYMWGGRNNAVACDTLSCFDTKKLEWST 495
T+ RW + P R GH A + K+Y++GG + A + L C+ K+ WS
Sbjct: 225 TSDSRWELASVVNDP--PPARAGHVAFTFSDKLYIFGGTDGANFFNDLWCYHPKQSAWSK 282
Query: 496 PQVTGMVPYAKDGHSACVIKNKMYIFGGFEYLTDQYSQEVHCLDLDTLQWTFIDAQGTPP 675
+ G+ P + GH+A V++ +Y+FGG + +++ L + W + P
Sbjct: 283 VETFGVAPNPRAGHAASVVEGILYVFGG-RASDGTFLNDLYAFRLSSKHWYKLSDLPFTP 341
Query: 676 SHRDFHTAVAVGDRMFVFGGK 738
S R HT G + + GGK
Sbjct: 342 SPRSSHTLSCSGLTLVLIGGK 362
Score = 82.2 bits (194), Expect = 9e-17
Identities = 52/177 (29%), Positives = 83/177 (46%), Gaps = 9/177 (5%)
Frame = +1
Query: 232 GDKIYSFGGYCSTEEYKDWEPIPVHILNTATLRWTSVNYKRSDVVPFQRYGHTAVAYGHK 411
G +IY FGG S + K+ + +LN AT ++TS+ + P R GH ++ G+
Sbjct: 92 GQEIYIFGGVASDSQPKN----DLWVLNLATSQFTSL--RSLGETPSPRLGHASILIGNA 145
Query: 412 VYMWGGRNNAVACD----TLSCFDTKKLEWSTPQVTGMVPYAKDGHSACVIKNKMYIFGG 579
++GG N D +L +T L W +G P + GH+ + +K+ +FGG
Sbjct: 146 FIVFGGLTNHDVADRQDNSLYLLNTSSLVWQKANASGARPSGRYGHTISCLGSKICLFGG 205
Query: 580 FEYLTDQYSQEVHCLDLDTL-----QWTFIDAQGTPPSHRDFHTAVAVGDRMFVFGG 735
L D Y ++ C DL+ L +W PP R H A D++++FGG
Sbjct: 206 --RLLDYYFNDLVCFDLNNLNTSDSRWELASVVNDPPPARAGHVAFTFSDKLYIFGG 260
Score = 61.3 bits (142), Expect = 2e-10
Identities = 44/147 (29%), Positives = 73/147 (49%), Gaps = 11/147 (7%)
Frame = +1
Query: 331 WTSVNYK-RSDVVPFQRYGHTAVAY---GHKVYMWGGRNNAVACDTLSCFDTKKLEWSTP 498
W+ + + S+V+P RY H + Y G ++Y++GG VA D+ D L +T
Sbjct: 66 WSKLTVRGSSNVLP--RYSHASHLYAEGGQEIYIFGG----VASDSQPKNDLWVLNLATS 119
Query: 499 QVT-----GMVPYAKDGHSACVIKNKMYIFGGFEY--LTDQYSQEVHCLDLDTLQWTFID 657
Q T G P + GH++ +I N +FGG + D+ ++ L+ +L W +
Sbjct: 120 QFTSLRSLGETPSPRLGHASILIGNAFIVFGGLTNHDVADRQDNSLYLLNTSSLVWQKAN 179
Query: 658 AQGTPPSHRDFHTAVAVGDRMFVFGGK 738
A G PS R HT +G ++ +FGG+
Sbjct: 180 ASGARPSGRYGHTISCLGSKICLFGGR 206
>SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1125
Score = 57.2 bits (132), Expect = 3e-09
Identities = 27/91 (29%), Positives = 47/91 (51%)
Frame = +1
Query: 466 FDTKKLEWSTPQVTGMVPYAKDGHSACVIKNKMYIFGGFEYLTDQYSQEVHCLDLDTLQW 645
FD W TP + P + HS +++ K+++ GG T S ++ DL+TL W
Sbjct: 228 FDETDWSWETPFLHSSSPPPRSNHSVTLVQGKIFVHGGHND-TGPLS-DLWLFDLETLSW 285
Query: 646 TFIDAQGTPPSHRDFHTAVAVGDRMFVFGGK 738
T + + G P R+ H A + D ++++GG+
Sbjct: 286 TEVRSIGRFPGPREGHQATTIDDTVYIYGGR 316
Score = 48.8 bits (111), Expect = 1e-06
Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Frame = +1
Query: 199 PMRVNHAAVCIGDKIYSFGGYCSTEEYKDWE--PIPVHILNTATLRWTSVNYKRSDVVPF 372
P RV H+ VC D IY FGG C +E +E ++ N + +W V+ +P
Sbjct: 111 PARVGHSIVCSADTIYLFGG-CDSETDSTFEVGDNSLYAYNFKSNQWNLVS--TQSPLPS 167
Query: 373 QRYGHTAVAYGHKVYMWGGRNNAVACDTLSCFDTKKLEWST 495
R GH+ + K++++GG + + FDTK ++ T
Sbjct: 168 PRTGHSMLLVDSKLWIFGGECQGKYLNDIHLFDTKGVDRRT 208
Score = 48.8 bits (111), Expect = 1e-06
Identities = 36/128 (28%), Positives = 56/128 (43%), Gaps = 1/128 (0%)
Frame = +1
Query: 181 VHIEGGPMRVNHAAVCIGDKIYSFGGYCSTEEYKDWEPIPVHILNTATLRWTSVNYKRSD 360
+H P R NH+ + KI+ GG+ T D + + + TL WT V +
Sbjct: 240 LHSSSPPPRSNHSVTLVQGKIFVHGGHNDTGPLSD-----LWLFDLETLSWTEV--RSIG 292
Query: 361 VVPFQRYGHTAVAYGHKVYMWGGRNN-AVACDTLSCFDTKKLEWSTPQVTGMVPYAKDGH 537
P R GH A VY++GGR+N + + L F+ + WS V+ +P
Sbjct: 293 RFPGPREGHQATTIDDTVYIYGGRDNKGLILNELWAFNYSQQRWSL--VSNPIPILLSDS 350
Query: 538 SACVIKNK 561
S+ I +K
Sbjct: 351 SSYKIVSK 358
Score = 48.8 bits (111), Expect = 1e-06
Identities = 22/71 (30%), Positives = 35/71 (49%)
Frame = +1
Query: 367 PFQRYGHTAVAYGHKVYMWGGRNNAVACDTLSCFDTKKLEWSTPQVTGMVPYAKDGHSAC 546
P R H+ K+++ GG N+ L FD + L W+ + G P ++GH A
Sbjct: 245 PPPRSNHSVTLVQGKIFVHGGHNDTGPLSDLWLFDLETLSWTEVRSIGRFPGPREGHQAT 304
Query: 547 VIKNKMYIFGG 579
I + +YI+GG
Sbjct: 305 TIDDTVYIYGG 315
Score = 44.4 bits (100), Expect = 2e-05
Identities = 28/114 (24%), Positives = 53/114 (46%), Gaps = 5/114 (4%)
Frame = +1
Query: 412 VYMWGGRNNAVACDTLSCFDTKKLE-WSTPQVTGMVPYAKDGHSACVIKNKMYIFGGFEY 588
+Y+ GGR + ++L D +S + A+ GHS + +Y+FGG +
Sbjct: 74 MYLHGGREKSGISNSLFKLDLDSCTVYSHNRGEDNDSPARVGHSIVCSADTIYLFGGCDS 133
Query: 589 LTDQYSQ----EVHCLDLDTLQWTFIDAQGTPPSHRDFHTAVAVGDRMFVFGGK 738
TD + ++ + + QW + Q PS R H+ + V ++++FGG+
Sbjct: 134 ETDSTFEVGDNSLYAYNFKSNQWNLVSTQSPLPSPRTGHSMLLVDSKLWIFGGE 187
Score = 44.4 bits (100), Expect = 2e-05
Identities = 23/90 (25%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Frame = +1
Query: 376 RYGHTAVAYGHKVYMWGGRNNA------VACDTLSCFDTKKLEWSTPQVTGMVPYAKDGH 537
R GH+ V +Y++GG ++ V ++L ++ K +W+ +P + GH
Sbjct: 113 RVGHSIVCSADTIYLFGGCDSETDSTFEVGDNSLYAYNFKSNQWNLVSTQSPLPSPRTGH 172
Query: 538 SACVIKNKMYIFGGFEYLTDQYSQEVHCLD 627
S ++ +K++IFGG +Y ++H D
Sbjct: 173 SMLLVDSKLWIFGG--ECQGKYLNDIHLFD 200
>SPBC21.05c |ral2||Ras guanyl-nucleotide exchange factor Ral2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 611
Score = 48.0 bits (109), Expect = 2e-06
Identities = 34/133 (25%), Positives = 56/133 (42%), Gaps = 7/133 (5%)
Frame = +1
Query: 310 LNTATLRWTSVNYKRSDVVPFQRYGHTAVAYGHKVYMWGGRN--NAVACDTLSCFDTKKL 483
L +T +TS S+ VP G + + YG + +++GGR+ NA + + D
Sbjct: 10 LRNSTNIFTSTFSLSSNNVPKPLIGESVIKYGDEAFVYGGRDALNAQLVNDMYVVDLNTC 69
Query: 484 EWSTPQVTG-MVPYAKDGHSACVIKNKMYIFGGFEYLTD----QYSQEVHCLDLDTLQWT 648
W + G P + HS + NK+ FGG + D ++ D++T QW+
Sbjct: 70 SWKQVEYQGNQKPIPRYFHSGDLWNNKLIFFGGMGFNDDTKCLYVLNDIDIYDIETKQWS 129
Query: 649 FIDAQGTPPSHRD 687
I T D
Sbjct: 130 HIPGMITENQTND 142
Score = 43.6 bits (98), Expect = 4e-05
Identities = 39/177 (22%), Positives = 79/177 (44%), Gaps = 29/177 (16%)
Frame = +1
Query: 208 VNHAAVCIGDKIYSFGGYCSTEEYKDWEPIPVHILNTATLRWTSVNYKRSDVVPFQRYGH 387
+ + + GD+ + +GG + + +++++ T W V Y+ + P RY H
Sbjct: 33 IGESVIKYGDEAFVYGGRDALNAQLVND---MYVVDLNTCSWKQVEYQGNQK-PIPRYFH 88
Query: 388 TAVAYGHKVYMWGGR--NNAVAC----DTLSCFDTKKLEWS--------------TPQVT 507
+ + +K+ +GG N+ C + + +D + +WS +V
Sbjct: 89 SGDLWNNKLIFFGGMGFNDDTKCLYVLNDIDIYDIETKQWSHIPGMITENQTNDDAKEVN 148
Query: 508 G---------MVPYAKDGHSACVIKNKMYIFGGFEYLTDQYSQEVHCLDLDTLQWTF 651
G + P A+ GH CV+ + + IF G + L++ Y +E++ DLD+ +W F
Sbjct: 149 GSDVDEKSKHLYPSARYGHLHCVLDHYLIIFCGQD-LSNSYIEEINIFDLDSGKWVF 204
>SPCC1919.12c |||aminopeptidase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 843
Score = 30.3 bits (65), Expect = 0.38
Identities = 18/44 (40%), Positives = 24/44 (54%)
Frame = -3
Query: 382 HIFEMGLRLISYSLQRSILELLCSIYGLVLAPNLYILQWNNIHQ 251
HIFE R+ + + Q S L CSI+G + LY+L W I Q
Sbjct: 7 HIFE---RICAKAFQSS---LTCSIFGFTVLLILYLLDWKRIAQ 44
>SPAC630.09c |mug58||glycerate kinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 277
Score = 29.5 bits (63), Expect = 0.66
Identities = 14/55 (25%), Positives = 31/55 (56%)
Frame = -1
Query: 345 VYRGPS*SCCVQYMDWYWLPIFIFFSGTISTKRIDFITDTYSCMIDSHRSPFDMH 181
+++G S +++++ Y +P ++F+ GT+S K + ++D +R P MH
Sbjct: 225 IHKGMSDEEVIEFVNHY-MPQYVFYLGTLSNK-VHLNPHCLEIILDENRYPVVMH 277
>SPAC12G12.09 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 977
Score = 27.1 bits (57), Expect = 3.5
Identities = 29/137 (21%), Positives = 57/137 (41%), Gaps = 7/137 (5%)
Frame = +1
Query: 277 YKDWEPIPVHILNTATLRWTSVNYKRSDV--VPFQRYGHT-----AVAYGHKVYMWGGRN 435
Y D +P + +LN T + + + Y +SDV + F + HT + +Y+W
Sbjct: 271 YVDQDPCHIRVLNANTDQ-SLILYTQSDVKNLHFGKNKHTKPHLLVMDALSNLYVWKILQ 329
Query: 436 NAVACDTLSCFDTKKLEWSTPQVTGMVPYAKDGHSACVIKNKMYIFGGFEYLTDQYSQEV 615
F ++ + + +P + + S ++KN +YI ++ S +V
Sbjct: 330 KRSEISVSLLFTIRRANYG---ICDWIPNSSNMFSM-IVKNSLYIVDISNIRSNNISPKV 385
Query: 616 HCLDLDTLQWTFIDAQG 666
+ D + LQ +D G
Sbjct: 386 YAKDFNGLQAAKVDLPG 402
>SPCC1223.09 |||uricase |Schizosaccharomyces pombe|chr 3|||Manual
Length = 296
Score = 26.6 bits (56), Expect = 4.7
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = +1
Query: 583 EYLTDQYSQEVH--CLDLDTLQWTFIDAQGTPPSH 681
++ D+Y + +H LD+ WT ++ QG P SH
Sbjct: 89 KHFVDKY-KHIHGAALDITITPWTRMEVQGKPHSH 122
>SPAC959.06c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 225
Score = 25.8 bits (54), Expect = 8.1
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = -2
Query: 491 LHSSFFVSKHERVSHATALFLPPHI 417
+H S ++ +R+SH + LFL P++
Sbjct: 113 MHKSITLAIDKRISHVSYLFLAPYL 137
>SPAC22E12.02 |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 25.8 bits (54), Expect = 8.1
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -2
Query: 332 HLRVAVFNIWTGIGSQSLYSSVEQYP 255
H R+ V N+ + +SLY + +YP
Sbjct: 29 HFRLFVGNLGNDVNDESLYQAFSEYP 54
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,783,904
Number of Sequences: 5004
Number of extensions: 85199
Number of successful extensions: 231
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 191
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 210
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 440481800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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