Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP17_F_B14
(881 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 123 1e-28
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 119 3e-27
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 109 2e-24
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 101 7e-22
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 79 5e-15
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 77 1e-14
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 75 7e-14
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 75 7e-14
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 75 7e-14
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 69 4e-12
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 61 9e-10
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 61 9e-10
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 61 9e-10
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 60 3e-09
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 60 3e-09
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 58 8e-09
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 58 1e-08
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 58 1e-08
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 58 1e-08
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 53 3e-07
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 53 3e-07
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 53 3e-07
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 53 3e-07
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 53 3e-07
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 50 2e-06
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 50 2e-06
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 47 2e-05
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 47 2e-05
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 46 3e-05
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 46 3e-05
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 46 3e-05
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 46 5e-05
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 45 8e-05
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 43 3e-04
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 43 3e-04
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 43 3e-04
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 42 4e-04
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 41 0.001
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 40 0.002
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 40 0.002
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 40 0.003
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 40 0.003
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 40 0.003
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 39 0.005
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 33 0.36
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 32 0.47
Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical pr... 32 0.62
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 31 1.4
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ... 30 1.9
AC091124-2|AAK27879.2| 1114|Caenorhabditis elegans Hypothetical ... 30 2.5
Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical p... 29 3.3
U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical pr... 29 3.3
U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein... 29 3.3
Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical pr... 29 4.4
AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine r... 29 4.4
AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine r... 29 4.4
Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical pr... 29 5.8
Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical pr... 29 5.8
U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical p... 29 5.8
U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical p... 29 5.8
U93847-1|AAB58269.1| 760|Caenorhabditis elegans elongation fact... 28 7.7
U93846-1|AAB58268.1| 768|Caenorhabditis elegans elongation fact... 28 7.7
U10414-7|AAN63383.1| 768|Caenorhabditis elegans Elongation fact... 28 7.7
U10414-6|AAN63384.1| 760|Caenorhabditis elegans Elongation fact... 28 7.7
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 123 bits (297), Expect = 1e-28
Identities = 57/136 (41%), Positives = 89/136 (65%)
Frame = +1
Query: 298 MRRPDWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEAN 477
+R DW + +L P K+FY + V +R YE++++ + ++VT+ G V P+ F EA
Sbjct: 77 LRDVDWSAENLTPIEKDFYHENAAVSRREQYEIDQWVSANQVTLEGRGVPRPVFEFNEAP 136
Query: 478 FPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVAQTGSGKTLAYILPAIVHINNQP 657
P + + + +++PT IQ+ WPIAMSG+++ +A+TGSGKTLA++LPA+VHI Q
Sbjct: 137 LPGQIHELLYGK-FQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPALVHITKQA 195
Query: 658 PIRRGDGPIALVLAPT 705
+RG+GP LVL PT
Sbjct: 196 HRQRGEGPAVLVLLPT 211
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 119 bits (286), Expect = 3e-27
Identities = 51/132 (38%), Positives = 83/132 (62%)
Frame = +1
Query: 310 DWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDY 489
D + Q FNKNFY+ H + + +V +N + V G++ P+ F +F
Sbjct: 216 DHSQIQYQKFNKNFYEEHEDIKRLHYMDVIRLQNTMNLRVGGLKPPRPVCSFAHFSFDKL 275
Query: 490 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVAQTGSGKTLAYILPAIVHINNQPPIRR 669
+ + ++ Y++PTPIQA P A+SG+++ G+A+TGSGKT AY+ PAIVHI +QP ++
Sbjct: 276 LMEAIRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWPAIVHIMDQPDLKA 335
Query: 670 GDGPIALVLAPT 705
G+GP+A+++ PT
Sbjct: 336 GEGPVAVIVVPT 347
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 109 bits (263), Expect = 2e-24
Identities = 54/137 (39%), Positives = 83/137 (60%), Gaps = 1/137 (0%)
Frame = +1
Query: 298 MRRPDWDSVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNKHE-VTVSGVEVHNPIQYFEEA 474
+ + D V + F KNFY + + + EV+ YR + + +TV G++ PI+ + +
Sbjct: 250 LAQTDHSKVYYRKFKKNFYIETEEIRRMTKAEVKAYREELDSITVKGIDCPKPIKTWAQC 309
Query: 475 NFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVAQTGSGKTLAYILPAIVHINNQ 654
+ +K Y +PT IQAQ P MSG+++ G+A+TGSGKTLA++LP HI +Q
Sbjct: 310 GVNLKMMNVLKKFEYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLPMFRHILDQ 369
Query: 655 PPIRRGDGPIALVLAPT 705
P + GDGPIA++LAPT
Sbjct: 370 PELEEGDGPIAVILAPT 386
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 101 bits (242), Expect = 7e-22
Identities = 47/105 (44%), Positives = 69/105 (65%), Gaps = 4/105 (3%)
Frame = +1
Query: 403 YRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLX 582
+R +++ G V P++ +EEA FPD V Q VK +GY EPTPIQ Q PI + +++
Sbjct: 283 FREDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVI 342
Query: 583 GVAQTGSGKTLAYILPAIVHINNQPPIRRGD----GPIALVLAPT 705
GVA+TGSGKT A++LP +V I + P + R + GP A+++APT
Sbjct: 343 GVAETGSGKTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPT 387
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 78.6 bits (185), Expect = 5e-15
Identities = 41/99 (41%), Positives = 65/99 (65%), Gaps = 7/99 (7%)
Frame = +1
Query: 430 SGVEVHNPIQYFEEANFPDYVQQG-VKTMGYKEPTPIQAQGWPIAMSGKNLXGVAQTGSG 606
S V++ P+ FE+A + G ++ G+++P+PIQ+Q WP+ +SG++ GV+QTGSG
Sbjct: 74 STVKIPPPVNSFEQAFGSNASIMGEIRKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGSG 133
Query: 607 KTLAYILPAIVHINNQ-PPIRRGD-----GPIALVLAPT 705
KTLA++LPA++HI+ Q + D P LVL+PT
Sbjct: 134 KTLAFLLPALLHIDAQLAQYEKNDEEQKPSPFVLVLSPT 172
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 77.4 bits (182), Expect = 1e-14
Identities = 40/120 (33%), Positives = 66/120 (55%), Gaps = 4/120 (3%)
Frame = +1
Query: 358 PHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGV-KTMGYKEPTP 534
P + ++S + E R + ++ G + PI F E FP + + + K G PT
Sbjct: 156 PPGHIRRQSQEDYEIQRKRLGISCEGDHIPPPIGSFLEMKFPKSLLEFMQKQKGIVTPTA 215
Query: 535 IQAQGWPIAMSGKNLXGVAQTGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPT 705
IQ QG P+A+SG+++ G+A TGSGKT+ ++LP ++ Q P R +GP L++ P+
Sbjct: 216 IQIQGIPVALSGRDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLIIVPS 275
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 74.9 bits (176), Expect = 7e-14
Identities = 47/113 (41%), Positives = 62/113 (54%), Gaps = 10/113 (8%)
Frame = +1
Query: 397 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 576
++Y N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++
Sbjct: 120 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 178
Query: 577 LXGVAQTGSGKTLAYILPAIVHI------NNQPPI----RRGDGPIALVLAPT 705
L AQTGSGKT A++LP I HI +PP RR P ALVL+PT
Sbjct: 179 LMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPT 231
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 74.9 bits (176), Expect = 7e-14
Identities = 47/113 (41%), Positives = 62/113 (54%), Gaps = 10/113 (8%)
Frame = +1
Query: 397 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 576
++Y N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++
Sbjct: 104 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 162
Query: 577 LXGVAQTGSGKTLAYILPAIVHI------NNQPPI----RRGDGPIALVLAPT 705
L AQTGSGKT A++LP I HI +PP RR P ALVL+PT
Sbjct: 163 LMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPT 215
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 74.9 bits (176), Expect = 7e-14
Identities = 47/113 (41%), Positives = 62/113 (54%), Gaps = 10/113 (8%)
Frame = +1
Query: 397 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 576
++Y N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++
Sbjct: 101 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 159
Query: 577 LXGVAQTGSGKTLAYILPAIVHI------NNQPPI----RRGDGPIALVLAPT 705
L AQTGSGKT A++LP I HI +PP RR P ALVL+PT
Sbjct: 160 LMSCAQTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPT 212
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 68.9 bits (161), Expect = 4e-12
Identities = 37/106 (34%), Positives = 56/106 (52%), Gaps = 11/106 (10%)
Frame = +1
Query: 421 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVAQTG 600
V +G +V PI F + + +++++ +KT GY PTP+Q P G++L AQTG
Sbjct: 154 VEATGDDVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRDLMSCAQTG 213
Query: 601 SGKTLAYILPAIVHINNQPPI-----------RRGDGPIALVLAPT 705
SGKT A+++P + I P R+ P ALVL+PT
Sbjct: 214 SGKTAAFLVPLVNAILQDGPDAVHRSVTSSGGRKKQYPSALVLSPT 259
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 61.3 bits (142), Expect = 9e-10
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Frame = +1
Query: 451 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVAQTGSGKTLAYILP 630
P + F EAN + +Q+ V GY + TPIQ P+ G ++ AQTGSGKT A++LP
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLP 398
Query: 631 AIVHINNQPPIR-RGDG---PIALVLAPT 705
+ + + + G+G P ++L PT
Sbjct: 399 IMTRLIDDNNLNTAGEGGCYPRCIILTPT 427
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 61.3 bits (142), Expect = 9e-10
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Frame = +1
Query: 451 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVAQTGSGKTLAYILP 630
P + F EAN + +Q+ V GY + TPIQ P+ G ++ AQTGSGKT A++LP
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLP 398
Query: 631 AIVHINNQPPIR-RGDG---PIALVLAPT 705
+ + + + G+G P ++L PT
Sbjct: 399 IMTRLIDDNNLNTAGEGGCYPRCIILTPT 427
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 61.3 bits (142), Expect = 9e-10
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
Frame = +1
Query: 451 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVAQTGSGKTLAYILP 630
P + F EAN + +Q+ V GY + TPIQ P+ G ++ AQTGSGKT A++LP
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLP 398
Query: 631 AIVHINNQPPIR-RGDG---PIALVLAPT 705
+ + + + G+G P ++L PT
Sbjct: 399 IMTRLIDDNNLNTAGEGGCYPRCIILTPT 427
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 59.7 bits (138), Expect = 3e-09
Identities = 30/89 (33%), Positives = 50/89 (56%), Gaps = 4/89 (4%)
Frame = +1
Query: 451 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVAQTGSGKTLAYILP 630
P + F +++ P +++ V+ GY TPIQ P+ GK++ AQTGSGKT A++LP
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLP 355
Query: 631 AIVHINNQPPIRRG-DG---PIALVLAPT 705
+ + + + G +G P ++L PT
Sbjct: 356 IMSRLILEKDLNYGAEGGCYPRCIILTPT 384
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 59.7 bits (138), Expect = 3e-09
Identities = 30/89 (33%), Positives = 50/89 (56%), Gaps = 4/89 (4%)
Frame = +1
Query: 451 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVAQTGSGKTLAYILP 630
P + F +++ P +++ V+ GY TPIQ P+ GK++ AQTGSGKT A++LP
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLP 355
Query: 631 AIVHINNQPPIRRG-DG---PIALVLAPT 705
+ + + + G +G P ++L PT
Sbjct: 356 IMSRLILEKDLNYGAEGGCYPRCIILTPT 384
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 58.0 bits (134), Expect = 8e-09
Identities = 29/81 (35%), Positives = 45/81 (55%)
Frame = +1
Query: 463 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVAQTGSGKTLAYILPAIVH 642
FE+ N + + GY +PTPIQ P+A++GK++ A TG+GKT A++LP +
Sbjct: 150 FEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAATGTGKTAAFVLPILER 209
Query: 643 INNQPPIRRGDGPIALVLAPT 705
+ +P + LVL PT
Sbjct: 210 MIYRP--KGASCTRVLVLVPT 228
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 57.6 bits (133), Expect = 1e-08
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 4/85 (4%)
Frame = +1
Query: 463 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVAQTGSGKTLAYILPAIVH 642
F EAN + +++ V GY + TPIQ P+ G ++ AQTGSGKT A++LP +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 643 INNQPPIR-RGDG---PIALVLAPT 705
+ ++ + G+G P ++L PT
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPT 638
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 57.6 bits (133), Expect = 1e-08
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 4/85 (4%)
Frame = +1
Query: 463 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVAQTGSGKTLAYILPAIVH 642
F EAN + +++ V GY + TPIQ P+ G ++ AQTGSGKT A++LP +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 643 INNQPPIR-RGDG---PIALVLAPT 705
+ ++ + G+G P ++L PT
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPT 638
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 57.6 bits (133), Expect = 1e-08
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 4/85 (4%)
Frame = +1
Query: 463 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVAQTGSGKTLAYILPAIVH 642
F EAN + +++ V GY + TPIQ P+ G ++ AQTGSGKT A++LP +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 643 INNQPPIR-RGDG---PIALVLAPT 705
+ ++ + G+G P ++L PT
Sbjct: 614 LIDENDLNTAGEGGCYPRCIILTPT 638
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 52.8 bits (121), Expect = 3e-07
Identities = 29/82 (35%), Positives = 48/82 (58%), Gaps = 7/82 (8%)
Frame = +1
Query: 481 PDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK-NLXGVAQTGSGKTLAYILPAIVHI---- 645
P+ V + ++ MG+ EPT IQ+ P A+ + ++ G A+TGSGKTLA+ +P + +
Sbjct: 163 PNEVLEAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESS 222
Query: 646 --NNQPPIRRGDGPIALVLAPT 705
+ + GP AL++APT
Sbjct: 223 DDSQETESTEVRGPRALIVAPT 244
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 52.8 bits (121), Expect = 3e-07
Identities = 26/87 (29%), Positives = 48/87 (55%)
Frame = +1
Query: 445 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVAQTGSGKTLAYI 624
H +++ V + ++ G+ +PTPIQ + P M GK++ +++TGSGKT A++
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFV 79
Query: 625 LPAIVHINNQPPIRRGDGPIALVLAPT 705
+P + + R G AL+++PT
Sbjct: 80 IPMLQKLKR----RDTTGIRALMVSPT 102
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 52.8 bits (121), Expect = 3e-07
Identities = 26/87 (29%), Positives = 48/87 (55%)
Frame = +1
Query: 445 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVAQTGSGKTLAYI 624
H +++ V + ++ G+ +PTPIQ + P M GK++ +++TGSGKT A++
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFV 79
Query: 625 LPAIVHINNQPPIRRGDGPIALVLAPT 705
+P + + R G AL+++PT
Sbjct: 80 IPMLQKLKR----RDTTGIRALMVSPT 102
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 52.8 bits (121), Expect = 3e-07
Identities = 28/81 (34%), Positives = 45/81 (55%)
Frame = +1
Query: 463 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVAQTGSGKTLAYILPAIVH 642
F + ++ Q ++TM K TP+QA P + G ++ G A+TG+GKTLA+ +P +
Sbjct: 91 FSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQK 150
Query: 643 INNQPPIRRGDGPIALVLAPT 705
++ P G AL+L PT
Sbjct: 151 LSVDP-----YGIYALILTPT 166
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 52.8 bits (121), Expect = 3e-07
Identities = 28/81 (34%), Positives = 45/81 (55%)
Frame = +1
Query: 463 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVAQTGSGKTLAYILPAIVH 642
F + ++ Q ++TM K TP+QA P + G ++ G A+TG+GKTLA+ +P +
Sbjct: 91 FSQLGVCSWITQQLQTMQIKTATPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQK 150
Query: 643 INNQPPIRRGDGPIALVLAPT 705
++ P G AL+L PT
Sbjct: 151 LSVDP-----YGIYALILTPT 166
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 50.0 bits (114), Expect = 2e-06
Identities = 28/92 (30%), Positives = 45/92 (48%)
Frame = +1
Query: 370 VLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQG 549
V KR +++ R + + G + N I F +++ + + ++P+PIQ Q
Sbjct: 97 VEKRMQKLLDDIRRTNRIFTWGDHLPNIILRFSDSSMSPSLLNRLSENSIRQPSPIQMQS 156
Query: 550 WPIAMSGKNLXGVAQTGSGKTLAYILPAIVHI 645
P +N+ A TGSGKTLA+ LP I I
Sbjct: 157 IPFMTERRNVLASAPTGSGKTLAFALPVIDEI 188
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 50.0 bits (114), Expect = 2e-06
Identities = 23/82 (28%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Frame = +1
Query: 463 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVAQTGSGKTLAYILPAIVH 642
F + + + + + +G+++ +Q +A+ KN+ G A+TGSGKT A+++P +
Sbjct: 91 FADFGLDERILKSIGELGWEKANQVQESVISLALENKNIMGRARTGSGKTGAFLIPLVQK 150
Query: 643 INNQPPIRRGD-GPIALVLAPT 705
+ + G GP A+++APT
Sbjct: 151 LIAESKTNDGSVGPSAVIIAPT 172
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 47.2 bits (107), Expect = 2e-05
Identities = 26/81 (32%), Positives = 42/81 (51%)
Frame = +1
Query: 463 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVAQTGSGKTLAYILPAIVH 642
F E + + +G+ +P+ IQ P A+ GK++ G+A+TGSGKT A+ +P +
Sbjct: 46 FAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKTGAFAIPVLQS 105
Query: 643 INNQPPIRRGDGPIALVLAPT 705
+ + P LVL PT
Sbjct: 106 LLDHP-----QAFFCLVLTPT 121
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 46.8 bits (106), Expect = 2e-05
Identities = 25/79 (31%), Positives = 47/79 (59%)
Frame = +1
Query: 496 QGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVAQTGSGKTLAYILPAIVHINNQPPIRRGD 675
+ V+ +G+ T IQA+ + GK++ A+TGSGKTLA++LPAI + ++ ++ +
Sbjct: 81 KAVQGLGFTTMTEIQAKSIDPLLEGKDVLASAKTGSGKTLAFLLPAI-ELLHKLNWKQHN 139
Query: 676 GPIALVLAPTXXXHXNSXG 732
G ++++PT + G
Sbjct: 140 GTGVIIVSPTRELSMQTYG 158
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 46.4 bits (105), Expect = 3e-05
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Frame = +1
Query: 490 VQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVAQTGSGKTLAYILPAIVHI-----NNQ 654
+ + +K + Y IQ P + G ++ G A+T +GKT A+ LP I I +
Sbjct: 392 ILETLKRIKYNNVRTIQGAMIPQVLDGHDVLGQAETSAGKTAAFGLPIIDKILRMDEETR 451
Query: 655 PPIRRGDGPIALVLAPT 705
R+ DGP+AL+LAPT
Sbjct: 452 NKARQDDGPLALILAPT 468
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 46.4 bits (105), Expect = 3e-05
Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 5/107 (4%)
Frame = +1
Query: 400 EYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNL 579
++ K + VE+ + + P + +K M PTPIQ + M G ++
Sbjct: 717 DFDQKVVASTGKVEIPDMASFDGFKILPQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDV 776
Query: 580 XGVAQTGSGKTLAYILPAIVHI-----NNQPPIRRGDGPIALVLAPT 705
A TGSGKTLA+++P ++ + ++ P L++APT
Sbjct: 777 VACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPT 823
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 46.4 bits (105), Expect = 3e-05
Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 5/107 (4%)
Frame = +1
Query: 400 EYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNL 579
++ K + VE+ + + P + +K M PTPIQ + M G ++
Sbjct: 717 DFDQKVVASTGKVEIPDMASFDGFKILPQDLHDNLKRMKMNRPTPIQRASFFPIMHGNDV 776
Query: 580 XGVAQTGSGKTLAYILPAIVHI-----NNQPPIRRGDGPIALVLAPT 705
A TGSGKTLA+++P ++ + ++ P L++APT
Sbjct: 777 VACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPT 823
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 45.6 bits (103), Expect = 5e-05
Identities = 19/47 (40%), Positives = 31/47 (65%)
Frame = +1
Query: 496 QGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVAQTGSGKTLAYILPAI 636
+G+K Y +PT IQ +++G ++ G A+TGSGKTLA ++P +
Sbjct: 89 EGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIPVL 135
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 44.8 bits (101), Expect = 8e-05
Identities = 24/69 (34%), Positives = 42/69 (60%)
Frame = +1
Query: 499 GVKTMGYKEPTPIQAQGWPIAMSGKNLXGVAQTGSGKTLAYILPAIVHINNQPPIRRGDG 678
G+ G+++P+PIQ +A++G+++ A+ G+GKT AY +P I I QP ++
Sbjct: 57 GIFEKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYCIPVIEKI--QPALKAIQ- 113
Query: 679 PIALVLAPT 705
A+V+ PT
Sbjct: 114 --AMVIVPT 120
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 43.2 bits (97), Expect = 3e-04
Identities = 22/84 (26%), Positives = 48/84 (57%)
Frame = +1
Query: 454 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVAQTGSGKTLAYILPA 633
++ F++ + + +G+ G+++P+ IQ + +GK++ AQ+G+GKT + +
Sbjct: 28 VESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSI 87
Query: 634 IVHINNQPPIRRGDGPIALVLAPT 705
+ I+++ P + ALV+APT
Sbjct: 88 LQRIDHEDPHVQ-----ALVMAPT 106
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 43.2 bits (97), Expect = 3e-04
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 7/70 (10%)
Frame = +1
Query: 517 YKEPTPIQAQGWPIAMSGK-NLXGVAQTGSGKTLAYILPAIVHI------NNQPPIRRGD 675
+ EPT IQ+ P A+ + ++ G A+TGSGKTLA+ +P + + + +
Sbjct: 8 FSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETESTEVR 67
Query: 676 GPIALVLAPT 705
GP AL++APT
Sbjct: 68 GPRALIVAPT 77
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 43.2 bits (97), Expect = 3e-04
Identities = 22/84 (26%), Positives = 48/84 (57%)
Frame = +1
Query: 454 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVAQTGSGKTLAYILPA 633
++ F++ + + +G+ G+++P+ IQ + +GK++ AQ+G+GKT + +
Sbjct: 28 VESFDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSI 87
Query: 634 IVHINNQPPIRRGDGPIALVLAPT 705
+ I+++ P + ALV+APT
Sbjct: 88 LQRIDHEDPHVQ-----ALVMAPT 106
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 42.3 bits (95), Expect = 4e-04
Identities = 22/86 (25%), Positives = 47/86 (54%)
Frame = +1
Query: 448 NPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVAQTGSGKTLAYIL 627
N I F++ + + +G+ G+++P+ IQ + P + +++ AQ+G+GKT + +
Sbjct: 23 NVIPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAVPAILKARDVIAQAQSGTGKTATFSI 82
Query: 628 PAIVHINNQPPIRRGDGPIALVLAPT 705
+ ++ Q +R AL+L+PT
Sbjct: 83 SVLQSLDTQ--VRETQ---ALILSPT 103
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/84 (25%), Positives = 46/84 (54%)
Frame = +1
Query: 454 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVAQTGSGKTLAYILPA 633
I F++ + + +G+ G+++P+ IQ + P + +++ AQ+G+GKT + +
Sbjct: 25 IPTFDKMGLREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFSISV 84
Query: 634 IVHINNQPPIRRGDGPIALVLAPT 705
+ ++ Q +R AL+L+PT
Sbjct: 85 LQSLDTQ--VRETQ---ALILSPT 103
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 40.3 bits (90), Expect = 0.002
Identities = 16/64 (25%), Positives = 38/64 (59%)
Frame = +1
Query: 463 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVAQTGSGKTLAYILPAIVH 642
FE + +K + P+P+QA+ P+ + G+++ A++G+GKTL + + A+ +
Sbjct: 24 FESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVEN 83
Query: 643 INNQ 654
++++
Sbjct: 84 LDSR 87
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 40.3 bits (90), Expect = 0.002
Identities = 16/64 (25%), Positives = 38/64 (59%)
Frame = +1
Query: 463 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVAQTGSGKTLAYILPAIVH 642
FE + +K + P+P+QA+ P+ + G+++ A++G+GKTL + + A+ +
Sbjct: 24 FESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVEN 83
Query: 643 INNQ 654
++++
Sbjct: 84 LDSR 87
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 39.5 bits (88), Expect = 0.003
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = +1
Query: 454 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG--KNLXGVAQTGSGKTLAYIL 627
I F E V + + TM ++ PT IQ P+ + NL AQ+G+GKT A++L
Sbjct: 208 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 267
Query: 628 PAIVHIN 648
+ I+
Sbjct: 268 TMLCRID 274
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 39.5 bits (88), Expect = 0.003
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = +1
Query: 454 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG--KNLXGVAQTGSGKTLAYIL 627
I F E V + + TM ++ PT IQ P+ + NL AQ+G+GKT A++L
Sbjct: 233 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 292
Query: 628 PAIVHIN 648
+ I+
Sbjct: 293 TMLCRID 299
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 39.5 bits (88), Expect = 0.003
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = +1
Query: 454 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSG--KNLXGVAQTGSGKTLAYIL 627
I F E V + + TM ++ PT IQ P+ + NL AQ+G+GKT A++L
Sbjct: 617 ISSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVL 676
Query: 628 PAIVHIN 648
+ I+
Sbjct: 677 TMLCRID 683
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 38.7 bits (86), Expect = 0.005
Identities = 18/56 (32%), Positives = 30/56 (53%)
Frame = +1
Query: 463 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVAQTGSGKTLAYILP 630
FEE + + ++ + PT +Q++ P + G + A+TGSGKT A+ LP
Sbjct: 4 FEEFGIIPELSDALSSLNWTLPTAVQSEAIPAILGGADALIAAETGSGKTGAFSLP 59
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 32.7 bits (71), Expect = 0.36
Identities = 25/84 (29%), Positives = 42/84 (50%)
Frame = +1
Query: 454 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVAQTGSGKTLAYILPA 633
++ F E P+ ++ V YK T +Q ++ ++ + TGSGKTLA++LP
Sbjct: 10 LKTFREKLGPELLE--VFDKSYKSFTDVQVLSGTHLLNLSDVVVESPTGSGKTLAFVLPM 67
Query: 634 IVHINNQPPIRRGDGPIALVLAPT 705
+ I N G AL+L+P+
Sbjct: 68 MRMIQNAKLQPADIG--ALILSPS 89
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 32.3 bits (70), Expect = 0.47
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +1
Query: 553 PIAMSGKNLXGVAQTGSGKTLAYILPAIVHINNQP 657
P + +++ A TGSGKT+ Y+LP + + ++P
Sbjct: 151 PPPLRPRDVAIAAPTGSGKTICYVLPVLAAVGSKP 185
>Z79752-5|CAB02082.3| 1119|Caenorhabditis elegans Hypothetical
protein D2005.5 protein.
Length = 1119
Score = 31.9 bits (69), Expect = 0.62
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = +1
Query: 559 AMSGKNLXGVAQTGSGKTLAYILPAIVHINNQ 654
A+ GKN VA TGSGKT I A+ HI +
Sbjct: 382 ALEGKNCVIVAPTGSGKTEVAIYAALKHIEER 413
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/51 (27%), Positives = 29/51 (56%)
Frame = +1
Query: 496 QGVKTMGYKEPTPIQAQGWPIAMSGKNLXGVAQTGSGKTLAYILPAIVHIN 648
+G+ G+++P+ IQ +GK++ +Q GSGKT+ ++ + I+
Sbjct: 9 RGIYGFGFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISLIDILQGID 59
>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
protein Y46G5A.4 protein.
Length = 2145
Score = 30.3 bits (65), Expect = 1.9
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +1
Query: 514 GYKEPTPIQAQGW-PIAMSGKNLXGVAQTGSGKTLAYILPAIVHINNQP 657
G+K PIQ Q + + S +N+ A GSGKT L + H N P
Sbjct: 1318 GFKVFNPIQTQVFRTVFESNENVIVCAPNGSGKTAIAELAVLRHFENTP 1366
>AC091124-2|AAK27879.2| 1114|Caenorhabditis elegans Hypothetical
protein Y47A7.1 protein.
Length = 1114
Score = 29.9 bits (64), Expect = 2.5
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3
Query: 78 PASERIHSLNKHLQLNPKNNHVW 146
PAS ++H L++ LQLN N+ W
Sbjct: 773 PASHQLHCLSRALQLNKANDSAW 795
>Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical
protein F08A8.8 protein.
Length = 222
Score = 29.5 bits (63), Expect = 3.3
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +2
Query: 164 VETVVPNLEEATNSAIIRLGLATVAIDLEDLEALVGKKN 280
+ETV+ LE N +RL A VA E LE++ GK N
Sbjct: 71 IETVILALEAGMNLEDVRLEFAHVATREEILESVFGKLN 109
>U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical
protein ZC317.1 protein.
Length = 340
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 535 IQAQGWPIAMSGKNLXGVAQTGSGKTLAYILPAI 636
+Q + G+ L A TG GKT A+++PAI
Sbjct: 19 VQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAI 52
>U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein 14
protein.
Length = 528
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 535 IQAQGWPIAMSGKNLXGVAQTGSGKTLAYILPAI 636
+Q + G+ L A TG GKT A+++PAI
Sbjct: 119 VQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAI 152
>Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical
protein E03A3.2 protein.
Length = 809
Score = 29.1 bits (62), Expect = 4.4
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +1
Query: 595 TGSGKTLAYILPAIVH 642
TG+GK+L Y LPA+VH
Sbjct: 203 TGAGKSLCYQLPAVVH 218
>AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine
receptor, class z protein9 protein.
Length = 281
Score = 29.1 bits (62), Expect = 4.4
Identities = 15/61 (24%), Positives = 32/61 (52%)
Frame = -3
Query: 576 ILSRHSYRPALSLNGRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVFISILF 397
++ R +YR N + + + Y + +I + F + + ++NLN T +L I+I+F
Sbjct: 26 LVYRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIF 85
Query: 396 D 394
+
Sbjct: 86 N 86
>AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine
receptor, class z protein8 protein.
Length = 281
Score = 29.1 bits (62), Expect = 4.4
Identities = 15/61 (24%), Positives = 32/61 (52%)
Frame = -3
Query: 576 ILSRHSYRPALSLNGRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVFISILF 397
++ R +YR N + + + Y + +I + F + + ++NLN T +L I+I+F
Sbjct: 26 LVYRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIF 85
Query: 396 D 394
+
Sbjct: 86 N 86
>Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical
protein T20D3.5b protein.
Length = 312
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -3
Query: 219 RRIIAEFVASSKFGTTVSTAIIPV 148
+++I +FVA S G T+STA P+
Sbjct: 220 QQLIGDFVAGSLLGATISTAFFPL 243
>Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical
protein T20D3.5a protein.
Length = 221
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -3
Query: 219 RRIIAEFVASSKFGTTVSTAIIPV 148
+++I +FVA S G T+STA P+
Sbjct: 129 QQLIGDFVAGSLLGATISTAFFPL 152
>U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical
protein K02F3.12b protein.
Length = 608
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1
Query: 532 PIQAQGWPIAMSGKNLXGVAQTGSGKTLAYILPAIV 639
P+Q MS ++ + TG GK+L Y LPA++
Sbjct: 89 PLQRAAINAVMSKEDAVVILSTGGGKSLCYQLPALL 124
>U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical
protein K02F3.12a protein.
Length = 631
Score = 28.7 bits (61), Expect = 5.8
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1
Query: 532 PIQAQGWPIAMSGKNLXGVAQTGSGKTLAYILPAIV 639
P+Q MS ++ + TG GK+L Y LPA++
Sbjct: 112 PLQRAAINAVMSKEDAVVILSTGGGKSLCYQLPALL 147
>U93847-1|AAB58269.1| 760|Caenorhabditis elegans elongation
factor-2 kinase EFK-1B isoform protein.
Length = 760
Score = 28.3 bits (60), Expect = 7.7
Identities = 18/78 (23%), Positives = 34/78 (43%)
Frame = -3
Query: 312 IWASHVLPSREFFFPTKASRSSKSIATVAKPRRIIAEFVASSKFGTTVSTAIIPVTRHDY 133
++ +H + + P + + KSI + E S G T ++ P+TRH+
Sbjct: 647 LYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSFAPLTRHEI 706
Query: 132 FSDLVEDVYLNYGFFLTQ 79
+ + E +Y G+ L Q
Sbjct: 707 LAKMAE-MYKEGGYGLNQ 723
>U93846-1|AAB58268.1| 768|Caenorhabditis elegans elongation
factor-2 kinase EFK-1A isoform protein.
Length = 768
Score = 28.3 bits (60), Expect = 7.7
Identities = 18/78 (23%), Positives = 34/78 (43%)
Frame = -3
Query: 312 IWASHVLPSREFFFPTKASRSSKSIATVAKPRRIIAEFVASSKFGTTVSTAIIPVTRHDY 133
++ +H + + P + + KSI + E S G T ++ P+TRH+
Sbjct: 655 LYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSFAPLTRHEI 714
Query: 132 FSDLVEDVYLNYGFFLTQ 79
+ + E +Y G+ L Q
Sbjct: 715 LAKMAE-MYKEGGYGLNQ 731
>U10414-7|AAN63383.1| 768|Caenorhabditis elegans Elongation factor
kinase protein1, isoform a protein.
Length = 768
Score = 28.3 bits (60), Expect = 7.7
Identities = 18/78 (23%), Positives = 34/78 (43%)
Frame = -3
Query: 312 IWASHVLPSREFFFPTKASRSSKSIATVAKPRRIIAEFVASSKFGTTVSTAIIPVTRHDY 133
++ +H + + P + + KSI + E S G T ++ P+TRH+
Sbjct: 655 LYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSFAPLTRHEI 714
Query: 132 FSDLVEDVYLNYGFFLTQ 79
+ + E +Y G+ L Q
Sbjct: 715 LAKMAE-MYKEGGYGLNQ 731
>U10414-6|AAN63384.1| 760|Caenorhabditis elegans Elongation factor
kinase protein1, isoform b protein.
Length = 760
Score = 28.3 bits (60), Expect = 7.7
Identities = 18/78 (23%), Positives = 34/78 (43%)
Frame = -3
Query: 312 IWASHVLPSREFFFPTKASRSSKSIATVAKPRRIIAEFVASSKFGTTVSTAIIPVTRHDY 133
++ +H + + P + + KSI + E S G T ++ P+TRH+
Sbjct: 647 LYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSFAPLTRHEI 706
Query: 132 FSDLVEDVYLNYGFFLTQ 79
+ + E +Y G+ L Q
Sbjct: 707 LAKMAE-MYKEGGYGLNQ 723
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,556,734
Number of Sequences: 27780
Number of extensions: 363097
Number of successful extensions: 1053
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 1010
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1050
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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