Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_B11
         (891 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0587 + 30162806-30163183,30163315-30163478,30163571-301636...    29   3.8  
08_02_0534 + 18285477-18285689,18286189-18286348,18287924-182881...    29   6.6  
02_01_0564 - 4136114-4136566,4136977-4137047,4137197-4137275,413...    28   8.7  

>02_05_0587 + 30162806-30163183,30163315-30163478,30163571-30163654,
            30163737-30163794,30164092-30164145,30164244-30164309,
            30164310-30164381,30164547-30164627,30165361-30165533,
            30165916-30166018,30166148-30166279,30166432-30166554,
            30166898-30167002,30167397-30167722,30167919-30168258,
            30169973-30170113,30170589-30170801,30170901-30171119,
            30171272-30171619,30171711-30172043,30172548-30172601
          Length = 1188

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 16/71 (22%), Positives = 31/71 (43%)
 Frame = -3

Query: 850  GSFELTLAXHSVFIGCGAILLSSVNTTGYCRFPEMGFIHVVSVHVKFITEWFSFFVFVLN 671
            G  ++ L     +  CG   ++S  T  Y   P + F++ +S+  +  + WF  F +V+ 
Sbjct: 1015 GHGKIKLGLQMGYSVCGFWAVNSFPTLYYVTIPSLCFLNGISLFPEKTSPWFIPFAYVMV 1074

Query: 670  FTKLCFICSQL 638
                C +   L
Sbjct: 1075 AAYSCSLAESL 1085


>08_02_0534 +
           18285477-18285689,18286189-18286348,18287924-18288124,
           18288216-18288280,18288465-18288492,18288568-18288629,
           18288885-18288971,18289310-18289360,18289663-18289884,
           18291148-18291241,18291349-18291489,18291587-18291672
          Length = 469

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 19/66 (28%), Positives = 33/66 (50%)
 Frame = +2

Query: 557 TQNLLKIINDLWMSQTILRNTLNKKDKELTAYKTKFGEIQHKHKKTEPFSDELHMNTHNM 736
           T+  LK I + W  +TI++    K+ ++ T+ + ++  +     K  P SDE     HN+
Sbjct: 195 TKAFLKGI-ETWKKETIIKREAEKRSEQ-TSEELEYRPVPASESK--PPSDEAVSILHNV 250

Query: 737 YETHFG 754
           Y   FG
Sbjct: 251 YWKEFG 256


>02_01_0564 -
           4136114-4136566,4136977-4137047,4137197-4137275,
           4137380-4137535,4137867-4137938,4138081-4138161,
           4138237-4138302,4138482-4138547,4138648-4138698,
           4138982-4139109,4139239-4139377,4139606-4139643,
           4139679-4139748,4140194-4140277
          Length = 517

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 15/63 (23%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
 Frame = +2

Query: 581 NDLWMSQTILRNTLNKKDKELTAYKTKFGEIQHKHKKTEPFSDELHMNTHNMY-ETHFGE 757
           ND + + +      N +   L   + ++ + QH+ +  +P   + H + HNMY +TH+ +
Sbjct: 409 NDPFATSSSFLPPSNVQFAMLNQQQHQYYQSQHQQQYYQPHHFQDHQHHHNMYFQTHYQQ 468

Query: 758 SAI 766
           + I
Sbjct: 469 NQI 471


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,750,583
Number of Sequences: 37544
Number of extensions: 374089
Number of successful extensions: 806
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 785
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 806
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)