Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_B11
         (891 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL137068-7|CAD20123.1| 1007|Homo sapiens centrosomal protein 110...    32   3.2  
AL137068-5|CAI12358.1| 1773|Homo sapiens centrosomal protein 110...    32   3.2  
AL137068-2|CAM13285.1| 2325|Homo sapiens centrosomal protein 110...    32   3.2  
AK074079-1|BAB84905.1| 1793|Homo sapiens FLJ00150 protein protein.     32   3.2  
AF513978-1|AAP43846.1| 2325|Homo sapiens CENTRIOLIN protein.           32   3.2  
AF083322-1|AAC32373.1|  994|Homo sapiens centriole associated pr...    32   3.2  

>AL137068-7|CAD20123.1| 1007|Homo sapiens centrosomal protein 110kDa
           protein.
          Length = 1007

 Score = 31.9 bits (69), Expect = 3.2
 Identities = 17/56 (30%), Positives = 30/56 (53%)
 Frame = +2

Query: 515 RLSRVSDEMMFQKITQNLLKIINDLWMSQTILRNTLNKKDKELTAYKTKFGEIQHK 682
           +L  V  EMMFQ++ +      + L  S+  L+   ++ +KELT  K+K  ++  K
Sbjct: 622 KLKLVQQEMMFQRLQKERESEESKLETSKVTLKEQQHQLEKELTDQKSKLDQVLSK 677


>AL137068-5|CAI12358.1| 1773|Homo sapiens centrosomal protein 110kDa
            protein.
          Length = 1773

 Score = 31.9 bits (69), Expect = 3.2
 Identities = 17/56 (30%), Positives = 30/56 (53%)
 Frame = +2

Query: 515  RLSRVSDEMMFQKITQNLLKIINDLWMSQTILRNTLNKKDKELTAYKTKFGEIQHK 682
            +L  V  EMMFQ++ +      + L  S+  L+   ++ +KELT  K+K  ++  K
Sbjct: 1388 KLKLVQQEMMFQRLQKERESEESKLETSKVTLKEQQHQLEKELTDQKSKLDQVLSK 1443


>AL137068-2|CAM13285.1| 2325|Homo sapiens centrosomal protein 110kDa
            protein.
          Length = 2325

 Score = 31.9 bits (69), Expect = 3.2
 Identities = 17/56 (30%), Positives = 30/56 (53%)
 Frame = +2

Query: 515  RLSRVSDEMMFQKITQNLLKIINDLWMSQTILRNTLNKKDKELTAYKTKFGEIQHK 682
            +L  V  EMMFQ++ +      + L  S+  L+   ++ +KELT  K+K  ++  K
Sbjct: 1940 KLKLVQQEMMFQRLQKERESEESKLETSKVTLKEQQHQLEKELTDQKSKLDQVLSK 1995


>AK074079-1|BAB84905.1| 1793|Homo sapiens FLJ00150 protein protein.
          Length = 1793

 Score = 31.9 bits (69), Expect = 3.2
 Identities = 17/56 (30%), Positives = 30/56 (53%)
 Frame = +2

Query: 515  RLSRVSDEMMFQKITQNLLKIINDLWMSQTILRNTLNKKDKELTAYKTKFGEIQHK 682
            +L  V  EMMFQ++ +      + L  S+  L+   ++ +KELT  K+K  ++  K
Sbjct: 1408 KLKLVQQEMMFQRLQKERESEESKLETSKVTLKEQQHQLEKELTDQKSKLDQVLSK 1463


>AF513978-1|AAP43846.1| 2325|Homo sapiens CENTRIOLIN protein.
          Length = 2325

 Score = 31.9 bits (69), Expect = 3.2
 Identities = 17/56 (30%), Positives = 30/56 (53%)
 Frame = +2

Query: 515  RLSRVSDEMMFQKITQNLLKIINDLWMSQTILRNTLNKKDKELTAYKTKFGEIQHK 682
            +L  V  EMMFQ++ +      + L  S+  L+   ++ +KELT  K+K  ++  K
Sbjct: 1940 KLKLVQQEMMFQRLQKERESEESKLETSKVTLKEQQHQLEKELTDQKSKLDQVLSK 1995


>AF083322-1|AAC32373.1|  994|Homo sapiens centriole associated
           protein CEP110 protein.
          Length = 994

 Score = 31.9 bits (69), Expect = 3.2
 Identities = 17/56 (30%), Positives = 30/56 (53%)
 Frame = +2

Query: 515 RLSRVSDEMMFQKITQNLLKIINDLWMSQTILRNTLNKKDKELTAYKTKFGEIQHK 682
           +L  V  EMMFQ++ +      + L  S+  L+   ++ +KELT  K+K  ++  K
Sbjct: 609 KLKLVQQEMMFQRLQKERESEESKLETSKVTLKEQQHQLEKELTDQKSKLDQVLSK 664


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,519,251
Number of Sequences: 237096
Number of extensions: 2314453
Number of successful extensions: 4444
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 4200
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4431
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11437206932
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)