Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_B11
         (891 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41528-3|AAK39170.2|  594|Caenorhabditis elegans Kinesin-like pr...    31   1.1  
Z46828-8|CAE17900.1|  166|Caenorhabditis elegans Hypothetical pr...    31   1.5  
AL023832-3|CAE17976.1|  166|Caenorhabditis elegans Hypothetical ...    31   1.5  
Z98866-21|CAD56612.1|  743|Caenorhabditis elegans Hypothetical p...    29   4.5  
Z98866-20|CAB11567.1|  734|Caenorhabditis elegans Hypothetical p...    29   4.5  
AF016438-3|AAQ62456.1|  173|Caenorhabditis elegans Hypothetical ...    29   4.5  
U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myos...    29   5.9  

>U41528-3|AAK39170.2|  594|Caenorhabditis elegans Kinesin-like
           protein protein 8 protein.
          Length = 594

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 18/85 (21%), Positives = 41/85 (48%)
 Frame = +2

Query: 509 KCRLSRVSDEMMFQKITQNLLKIINDLWMSQTILRNTLNKKDKELTAYKTKFGEIQHKHK 688
           K  ++R+ D +  +K  +N L+   ++   +   +  +  +D+E+ A++     +  +H+
Sbjct: 378 KEEVNRIKDSLRLEKSKRNELE--EEVLRQRRCAQEEIESRDQEIEAFRKML--VTLRHE 433

Query: 689 KTEPFSDELHMNTHNMYETHFGESA 763
           K E   +   ++ HN    H  ESA
Sbjct: 434 KMERSQNPRKISRHNRSSAHDEESA 458


>Z46828-8|CAE17900.1|  166|Caenorhabditis elegans Hypothetical
           protein Y19D2B.2 protein.
          Length = 166

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 24/97 (24%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
 Frame = +2

Query: 485 SCGFPF-KLKCRLSR--VSDEMMFQKITQNLLKIINDLWMSQTILRNTLNKKDKELTAYK 655
           +C FP+ K+  +L +  +S++   Q  + + +  ++   +  ++ R  L ++ ++L   K
Sbjct: 57  ACVFPYSKIPAKLQKDDISNQGFLQDQSNSSICELSYHHVD-SVSRKCLQERIQKLEQEK 115

Query: 656 TKFGEI---QHKHKKTEPFSDELHMNTHNMYETHFGE 757
               EI   QHK K  E   D+    T N Y+ HF +
Sbjct: 116 AALIEIMISQHKSKYEEKLKDKKEKRTSNYYKKHFNK 152


>AL023832-3|CAE17976.1|  166|Caenorhabditis elegans Hypothetical
           protein Y19D2B.2 protein.
          Length = 166

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 24/97 (24%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
 Frame = +2

Query: 485 SCGFPF-KLKCRLSR--VSDEMMFQKITQNLLKIINDLWMSQTILRNTLNKKDKELTAYK 655
           +C FP+ K+  +L +  +S++   Q  + + +  ++   +  ++ R  L ++ ++L   K
Sbjct: 57  ACVFPYSKIPAKLQKDDISNQGFLQDQSNSSICELSYHHVD-SVSRKCLQERIQKLEQEK 115

Query: 656 TKFGEI---QHKHKKTEPFSDELHMNTHNMYETHFGE 757
               EI   QHK K  E   D+    T N Y+ HF +
Sbjct: 116 AALIEIMISQHKSKYEEKLKDKKEKRTSNYYKKHFNK 152


>Z98866-21|CAD56612.1|  743|Caenorhabditis elegans Hypothetical
           protein Y49E10.23b protein.
          Length = 743

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
 Frame = +2

Query: 560 QNLLKIINDLWMSQTILRNTLNKKDKELTAYKTKFGEIQHKHKKT--EPFSDELHMN 724
           + LL+ I +  +++ +L+N  N+  KEL A   +  E++ + K T     + E H N
Sbjct: 69  EKLLRTIRERDLNEELLKNVQNQHKKELDAQVRRIRELEVQLKTTTDRGLAQEAHFN 125


>Z98866-20|CAB11567.1|  734|Caenorhabditis elegans Hypothetical
           protein Y49E10.23a protein.
          Length = 734

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
 Frame = +2

Query: 560 QNLLKIINDLWMSQTILRNTLNKKDKELTAYKTKFGEIQHKHKKT--EPFSDELHMN 724
           + LL+ I +  +++ +L+N  N+  KEL A   +  E++ + K T     + E H N
Sbjct: 69  EKLLRTIRERDLNEELLKNVQNQHKKELDAQVRRIRELEVQLKTTTDRGLAQEAHFN 125


>AF016438-3|AAQ62456.1|  173|Caenorhabditis elegans Hypothetical
           protein F44C8.9b protein.
          Length = 173

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = -1

Query: 666 PNFVLYAVSSLSFLFKVFLNIV*LIHRSLIIFSRF*VIFWN 544
           P F++      +  FK  +++  L+H++  IF    VIFW+
Sbjct: 114 PEFIISFEPEKASPFKTVIDVTDLVHKAAEIFQEVKVIFWH 154


>U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myosin
            protein 1 protein.
          Length = 1963

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
 Frame = +2

Query: 515  RLSRVSDEMMFQKITQNLLKIINDLWMS---QTILRNTLNKKDKELTAYKTKFGEIQH 679
            R +R   EM  +++   L K+  D+       T+L++ +++KD+E+ A K    +IQH
Sbjct: 1130 RNARNKAEMTRREVVAQLEKVKGDVLDKVDEATMLQDLMSRKDEEVNATKRAIEQIQH 1187


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,727,715
Number of Sequences: 27780
Number of extensions: 402033
Number of successful extensions: 1133
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1087
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1133
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)