Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP17_F_B10
(910 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 64 4e-09
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 61 4e-08
UniRef50_P03093 Cluster: Capsid protein VP2; n=217; Polyomavirus... 59 1e-07
UniRef50_P24596 Cluster: Capsid protein VP2; n=4; Murine pneumot... 46 0.002
UniRef50_Q80FI5 Cluster: Putative uncharacterized protein; n=2; ... 44 0.004
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 44 0.005
UniRef50_P24849 Cluster: Capsid protein VP2; n=2; Bovine polyoma... 43 0.012
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 42 0.016
UniRef50_Q20HY5 Cluster: Putative VP2; n=2; Crow polyomavirus|Re... 41 0.038
UniRef50_Q20HX9 Cluster: Putative VP2; n=2; Finch polyomavirus|R... 40 0.088
UniRef50_P03096 Cluster: Capsid protein VP2; n=13; Polyomavirus|... 39 0.15
UniRef50_P03098 Cluster: Capsid protein VP2; n=5; Hamster polyom... 39 0.20
UniRef50_P04011 Cluster: Capsid protein VP2; n=9; African green ... 37 0.62
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 35 2.5
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 35 3.3
UniRef50_Q8GUF1 Cluster: Reverse transcriptase; n=1; Cicer ariet... 34 4.4
UniRef50_P13892 Cluster: Capsid protein VP2; n=27; Budgerigar fl... 34 4.4
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 34 5.8
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 64.5 bits (150), Expect = 4e-09
Identities = 40/95 (42%), Positives = 41/95 (43%)
Frame = +1
Query: 598 RFSIGSAPLTXITKIXXXXXGGXTRXDYKXXXXXPPXXSPXALSCSXPAXYRXPVXLSPX 777
RFSIGSAPLT ITKI GG TR DYK P +P P
Sbjct: 15 RFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRF-PLEAPSCALLFRPCRLPDTCPPFSL 73
Query: 778 XEAWXFLXXXXVXISXXXXSXXPXXXVXTNPPXXP 882
EAW FL V IS S P V TNPP P
Sbjct: 74 REAWRFLIAHAVGISVRCRSFAPSWAVCTNPPFSP 108
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 60.9 bits (141), Expect = 4e-08
Identities = 35/65 (53%), Positives = 37/65 (56%)
Frame = -3
Query: 632 MXVRGAEPMEKRQQXGLFTVXGLLXAFXXHVLSCVIPXXLWITVLPPXSEXIPLAXAERP 453
M VRGAEPMEKR + L V L + P LWITVLPP SE PLA ERP
Sbjct: 1 MLVRGAEPMEKRLRCWLLPVLCFLLTCSFRLY----PLILWITVLPPLSELTPLAAVERP 56
Query: 452 SAASQ 438
S ASQ
Sbjct: 57 SVASQ 61
>UniRef50_P03093 Cluster: Capsid protein VP2; n=217;
Polyomavirus|Rep: Capsid protein VP2 - Simian virus 40
(SV40)
Length = 352
Score = 59.3 bits (137), Expect = 1e-07
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = +3
Query: 285 ANQRTAPQWMLPLLLGLYGSVTSALKA 365
ANQRTAPQWMLPLLLGLYGSVTSALKA
Sbjct: 286 ANQRTAPQWMLPLLLGLYGSVTSALKA 312
>UniRef50_P24596 Cluster: Capsid protein VP2; n=4; Murine
pneumotropic virus|Rep: Capsid protein VP2 - Murine
polyomavirus (strain Kilham) (MPyV)
Length = 341
Score = 45.6 bits (103), Expect = 0.002
Identities = 19/26 (73%), Positives = 22/26 (84%)
Frame = +3
Query: 285 ANQRTAPQWMLPLLLGLYGSVTSALK 362
ANQR+AP WMLPLLLGLYG +T + K
Sbjct: 274 ANQRSAPDWMLPLLLGLYGDLTPSWK 299
>UniRef50_Q80FI5 Cluster: Putative uncharacterized protein; n=2;
Goose hemorrhagic polyomavirus|Rep: Putative
uncharacterized protein - Goose hemorrhagic polyomavirus
Length = 326
Score = 44.4 bits (100), Expect = 0.004
Identities = 19/27 (70%), Positives = 21/27 (77%)
Frame = +3
Query: 285 ANQRTAPQWMLPLLLGLYGSVTSALKA 365
ANQR AP WMLPL+LGLYG+V KA
Sbjct: 259 ANQRAAPDWMLPLILGLYGTVYPGWKA 285
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 44.0 bits (99), Expect = 0.005
Identities = 23/42 (54%), Positives = 24/42 (57%)
Frame = +1
Query: 577 VKRPXCWRFSIGSAPLTXITKIXXXXXGGXTRXDYKXXXXXP 702
V+ P RFSIGSAPLT ITK GG TR DYK P
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFP 85
>UniRef50_P24849 Cluster: Capsid protein VP2; n=2; Bovine
polyomavirus|Rep: Capsid protein VP2 - Bovine
polyomavirus (BPyV)
Length = 353
Score = 42.7 bits (96), Expect = 0.012
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = +3
Query: 285 ANQRTAPQWMLPLLLGLYGSVTSALKA 365
A QR AP W+LPLLLGLYG +T A +A
Sbjct: 275 AEQRVAPDWLLPLLLGLYGDLTPAWEA 301
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 42.3 bits (95), Expect = 0.016
Identities = 22/40 (55%), Positives = 22/40 (55%)
Frame = +1
Query: 583 RPXCWRFSIGSAPLTXITKIXXXXXGGXTRXDYKXXXXXP 702
RP RFSIGSAPLT I K GG TR DYK P
Sbjct: 78 RPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFP 117
Score = 41.9 bits (94), Expect = 0.022
Identities = 19/25 (76%), Positives = 20/25 (80%)
Frame = +3
Query: 414 GALPLPXSLTRCARSFGXGERYXLT 488
G +PLP SLTR ARSFG GERY LT
Sbjct: 34 GDIPLPRSLTRYARSFGCGERYRLT 58
>UniRef50_Q20HY5 Cluster: Putative VP2; n=2; Crow polyomavirus|Rep:
Putative VP2 - Crow polyomavirus
Length = 333
Score = 41.1 bits (92), Expect = 0.038
Identities = 17/27 (62%), Positives = 21/27 (77%)
Frame = +3
Query: 285 ANQRTAPQWMLPLLLGLYGSVTSALKA 365
A+QR+ P WMLPL+LGLYG+V KA
Sbjct: 265 AHQRSCPDWMLPLILGLYGTVFPGWKA 291
>UniRef50_Q20HX9 Cluster: Putative VP2; n=2; Finch polyomavirus|Rep:
Putative VP2 - Finch polyomavirus
Length = 354
Score = 39.9 bits (89), Expect = 0.088
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +3
Query: 285 ANQRTAPQWMLPLLLGLYGSVT 350
A+QR AP W+LPLLLGLYG +T
Sbjct: 288 AHQRHAPDWLLPLLLGLYGDLT 309
>UniRef50_P03096 Cluster: Capsid protein VP2; n=13;
Polyomavirus|Rep: Capsid protein VP2 - Murine
polyomavirus (strain A2) (MPyV)
Length = 319
Score = 39.1 bits (87), Expect = 0.15
Identities = 14/22 (63%), Positives = 18/22 (81%)
Frame = +3
Query: 285 ANQRTAPQWMLPLLLGLYGSVT 350
++QR P WMLPL+LGLYG +T
Sbjct: 279 SHQRVTPDWMLPLILGLYGDIT 300
>UniRef50_P03098 Cluster: Capsid protein VP2; n=5; Hamster
polyomavirus|Rep: Capsid protein VP2 - Hamster
polyomavirus (HaPyV)
Length = 345
Score = 38.7 bits (86), Expect = 0.20
Identities = 14/22 (63%), Positives = 18/22 (81%)
Frame = +3
Query: 285 ANQRTAPQWMLPLLLGLYGSVT 350
A+QR P WMLPL+LGLYG ++
Sbjct: 302 AHQRVTPDWMLPLILGLYGDIS 323
>UniRef50_P04011 Cluster: Capsid protein VP2; n=9; African green
monkey polyomavirus|Rep: Capsid protein VP2 -
B-lymphotropic polyomavirus (LPV)
Length = 356
Score = 37.1 bits (82), Expect = 0.62
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +3
Query: 285 ANQRTAPQWMLPLLLGLYGSVT 350
A+QR WMLPL+LGLYG +T
Sbjct: 281 AHQRVTQDWMLPLILGLYGDIT 302
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 35.1 bits (77), Expect = 2.5
Identities = 22/43 (51%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = +3
Query: 399 AVXVLGALPLPXSLTRCARSFGXGERYXL-TXXR*YGYPQXSG 524
AV VL ALPL S TRC RS G G + R YG PQ G
Sbjct: 277 AVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQG 319
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 34.7 bits (76), Expect = 3.3
Identities = 15/20 (75%), Positives = 15/20 (75%)
Frame = +2
Query: 722 RSPVPTLPXTGXLSXFXPXG 781
RSPVPTLP TG LS F P G
Sbjct: 2 RSPVPTLPLTGYLSAFLPSG 21
>UniRef50_Q8GUF1 Cluster: Reverse transcriptase; n=1; Cicer
arietinum|Rep: Reverse transcriptase - Cicer arietinum
(Chickpea) (Garbanzo)
Length = 37
Score = 34.3 bits (75), Expect = 4.4
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +1
Query: 499 NTVIHXNXGITQERTC 546
NTVIH N GITQERTC
Sbjct: 21 NTVIHXNQGITQERTC 36
>UniRef50_P13892 Cluster: Capsid protein VP2; n=27; Budgerigar
fledgling disease polyomavirus|Rep: Capsid protein VP2 -
Budgerigar fledgling disease virus (BFDV)
Length = 341
Score = 34.3 bits (75), Expect = 4.4
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +3
Query: 285 ANQRTAPQWMLPLLLGLYGSVT 350
A QR A W+LPL+LGLYG +T
Sbjct: 275 AMQRHANDWLLPLILGLYGDLT 296
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 33.9 bits (74), Expect = 5.8
Identities = 20/39 (51%), Positives = 20/39 (51%)
Frame = -1
Query: 781 PXRXKXGQVSGXRQGXNRRAXXGXXQGXTXGXXYSPVGF 665
P K QVSG RQG NRRA G G SPVGF
Sbjct: 57 PKGKKAEQVSGKRQGRNRRAHEG-AAGEKSPASLSPVGF 94
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 508,023,001
Number of Sequences: 1657284
Number of extensions: 6742207
Number of successful extensions: 12061
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 11825
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12057
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 82801539422
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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