Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_B09
         (898 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    23   9.5  
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    23   9.5  
AF017062-1|AAC47144.2|  649|Anopheles gambiae soluble guanylyl c...    23   9.5  

>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 23.4 bits (48), Expect = 9.5
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -1

Query: 292 LFSTAPTIMENNAKSASLSLRSCF 221
           LF   P  +EN+ K  S  L +CF
Sbjct: 358 LFMKRPPYIENHRKLLSKDLHACF 381


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 23.4 bits (48), Expect = 9.5
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -1

Query: 292 LFSTAPTIMENNAKSASLSLRSCF 221
           LF   P  +EN+ K  S  L +CF
Sbjct: 358 LFMKRPPYIENHRKLLSKDLHACF 381


>AF017062-1|AAC47144.2|  649|Anopheles gambiae soluble guanylyl
           cyclase beta subunit protein.
          Length = 649

 Score = 23.4 bits (48), Expect = 9.5
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = -2

Query: 699 FPFHLVQKLPRHDLQTKRDVRLVYP 625
           FPFHL+     H +Q  R V  V P
Sbjct: 308 FPFHLMFDRNMHIVQAGRSVSRVIP 332


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 807,696
Number of Sequences: 2352
Number of extensions: 14749
Number of successful extensions: 18
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 96747534
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)