Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP17_F_B08
(889 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein Pkl1|S... 36 0.008
SPAC664.10 |klp2||kinesin-like protein Klp2|Schizosaccharomyces ... 36 0.008
SPBC337.06c |cwf15||complexed with Cdc5 protein Cwf15 |Schizosac... 34 0.031
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 32 0.13
SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 31 0.17
SPBC365.11 |||GRIP domain protein|Schizosaccharomyces pombe|chr ... 31 0.17
SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyce... 30 0.51
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 29 0.67
SPMIT.02 |||mitochondrial DNA binding endonuclease|Schizosacchar... 29 0.88
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 29 0.88
SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|ch... 29 1.2
SPBP4H10.06c |cut14|smc2, smc2|condensin subunit Cut14|Schizosac... 28 1.5
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 28 1.5
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 27 2.7
SPAC18B11.10 |tup11||transcriptional corepressor Tup11|Schizosac... 27 2.7
SPBC651.09c |||RNA polymerase II associated Paf1 complex |Schizo... 27 3.6
SPAC1834.08 |mak1|phk3|histidine kinase Mak1|Schizosaccharomyces... 27 3.6
SPCC895.07 |alp14|mtc1|Mad2-dependent spindle checkpoint compone... 27 3.6
SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78 |Schizosacch... 27 3.6
SPBC16C6.06 |pep1|vps10|sorting receptor for CPY|Schizosaccharom... 27 3.6
SPAC4F10.08 |mug126||sequence orphan|Schizosaccharomyces pombe|c... 27 4.7
SPBC409.21 |sec66||ER protein translocation subcomplex subunit S... 27 4.7
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 27 4.7
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 27 4.7
SPAC15A10.02 |taf12||transcription factor TFIID complex subunit ... 26 6.2
SPAC3C7.09 |set8||lysine methyltransferase Set8 |Schizosaccharom... 26 6.2
SPCC338.03c |||dubious|Schizosaccharomyces pombe|chr 3|||Manual 26 8.2
SPCC1322.09 |||conserved fungal protein|Schizosaccharomyces pomb... 26 8.2
SPAC664.03 |||RNA polymerase II associated Paf1 complex |Schizos... 26 8.2
SPBC29A10.15 |orc1|orp1, cdc30|origin recognition complex subuni... 26 8.2
SPBC30D10.11 |gpi1||pig-Q|Schizosaccharomyces pombe|chr 2|||Manual 26 8.2
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 26 8.2
SPAC694.06c |mrc1||mediator of replication checkpoint 1 |Schizos... 26 8.2
>SPAC3A11.14c |pkl1|klp1, SPAC3H5.03c|kinesin-like protein
Pkl1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 832
Score = 35.9 bits (79), Expect = 0.008
Identities = 31/149 (20%), Positives = 66/149 (44%), Gaps = 2/149 (1%)
Frame = +1
Query: 229 KMSSHEPQESIRITRRSLKTLQHSANDRENLVGRPTKGLKHQLSQESPGESVEVKRKNLL 408
K HE RR+L +Q S ++ L QE ++ +N L
Sbjct: 289 KSYKHEYANICESLRRALVLIQGSCTEKILRFKEKILDLLEMKQQEENDRISHIEYENDL 348
Query: 409 S-KETQANL-DTKISEDDLTNPKGASEKYWQILAEKRQLALQDALDENEKLRKTIEELKE 582
+ K+ + + + +++ + + K SEK ++ ++ L+D L E + LR + + +
Sbjct: 349 TVKKLKRRISELEMAVKEYESEKSYSEKEYEEKISSLRIELEDKLAEIDMLRNKLLKEEH 408
Query: 583 ENASLKQMLEEANSFVEIIKEELAXDSXN 669
++ S + LEE + +V I+++ + N
Sbjct: 409 KHHSTSEKLEELSKYVASIQDKERNNGQN 437
>SPAC664.10 |klp2||kinesin-like protein Klp2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 817
Score = 35.9 bits (79), Expect = 0.008
Identities = 41/148 (27%), Positives = 69/148 (46%), Gaps = 19/148 (12%)
Frame = +1
Query: 229 KMSSHEPQESIRITRRSLKTLQHS--ANDRENLVG-RPTKGLKHQLSQESPGESVEVKRK 399
K+ S + ES+ I S+K+ H A EN T L+HQ + ++E K
Sbjct: 231 KIVSQKGMESLEIMLNSMKSENHQRMAMLEENHARVMETAELQHQAELQDFASNIEQKAN 290
Query: 400 NLLSK------ETQANLDTKI----SEDDLTNPKGASEK--YWQILAEKRQLALQDALD- 540
+L+ + + + KI SE++L + EK + + E LA+Q +
Sbjct: 291 SLIMEYKNELQSAEEHFSHKIKELTSENELKISRLQEEKDSLLKKVQEGASLAMQRVQNK 350
Query: 541 ---ENEKLRKTIEELKEENASLKQMLEE 615
E ++L+ I+ L+EEN SLKQ +E+
Sbjct: 351 HDLEKKRLQSAIQPLQEENNSLKQQIEQ 378
>SPBC337.06c |cwf15||complexed with Cdc5 protein Cwf15
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 265
Score = 33.9 bits (74), Expect = 0.031
Identities = 30/138 (21%), Positives = 59/138 (42%), Gaps = 1/138 (0%)
Frame = +1
Query: 259 IRITRRSLKTLQHSANDRE-NLVGRPTKGLKHQLSQESPGESVEVKRKNLLSKETQANLD 435
+R T +H A+ E + + +G + + P VEV + LL + +A+ D
Sbjct: 58 LRAEAAHFATQEHGASSEEVSQNSKLIEGFTSPSTDDKPNNDVEVDYQELLRQTLEADED 117
Query: 436 TKISEDDLTNPKGASEKYWQILAEKRQLALQDALDENEKLRKTIEELKEENASLKQMLEE 615
S+D + + SE I K + Q+++D + + EE E+ + + + E
Sbjct: 118 ASDSDDSVDSSNKNSEV--SIKRRKTESNSQESVDSSNS-ESSDEESDSEDETQQLLREL 174
Query: 616 ANSFVEIIKEELAXDSXN 669
N E +E++ + N
Sbjct: 175 ENIKQERKREQMLQEEKN 192
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 31.9 bits (69), Expect = 0.13
Identities = 36/139 (25%), Positives = 59/139 (42%), Gaps = 16/139 (11%)
Frame = +1
Query: 280 LKTLQHSANDRENLVGRPTKGLKHQLSQESPGESVEVKRKNLLSKE-----TQANL-DTK 441
LK LQ+S + E L+ + QL E+ + N L KE +Q L + +
Sbjct: 312 LKELQNSNGELEKLLEAAQSSFEEQLESHKEAEASLKSQINFLEKEVSSLESQLKLANER 371
Query: 442 ISEDDLTNPKGASE-KYWQILAE-----KRQLALQDALDEN----EKLRKTIEELKEENA 591
+ D SE KY +L K Q ++ D E +K +T +E++
Sbjct: 372 LRHYDEIEISDMSELKYSNLLNNSMKGFKGQSSVSDLYSERLYYKQKYEQTCQEVERLQR 431
Query: 592 SLKQMLEEANSFVEIIKEE 648
S ++EEAN ++KE+
Sbjct: 432 SYNHVMEEANLQHPLVKEQ 450
Score = 27.1 bits (57), Expect = 3.6
Identities = 25/93 (26%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Frame = +1
Query: 376 ESVEVKRKNLLSKETQANLDTKISEDDLTNPKGASEKYWQILAEKRQLALQDALDENEK- 552
++VEV+ ++ + T+ L +++E + +N +KY LA ++ L + + E K
Sbjct: 941 DNVEVEAISIELERTKEKL--RMAELEKSN---IQQKY---LASEKTLEMMNETHEQFKH 992
Query: 553 -LRKTIEELKEENASLKQMLEEANSFVEIIKEE 648
+ I +E+ SL+ L + N VE++KEE
Sbjct: 993 LVESEISTREEKITSLRSELLDLNKRVEVLKEE 1025
>SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 395
Score = 31.5 bits (68), Expect = 0.17
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 5/93 (5%)
Frame = +1
Query: 358 SQESPGESVEVKR----KNLLSKETQANLDTKISEDDLTNPKGASEKYWQILAEKRQLAL 525
S +SP S V + +++ K + +L SED P G +K + R +
Sbjct: 84 STQSPETSENVVKNSVDESVAEKPEKEDLAVIESEDKAAKPDGEIKKNVETEVTSRSTSS 143
Query: 526 QDALDENEKLRKTIEELKEE-NASLKQMLEEAN 621
Q+ DE EK KT+ +L E+ + +K++ E N
Sbjct: 144 QEK-DELEKQVKTLHDLNEQKDKKIKELKERIN 175
Score = 28.3 bits (60), Expect = 1.5
Identities = 32/137 (23%), Positives = 61/137 (44%)
Frame = +1
Query: 244 EPQESIRITRRSLKTLQHSANDRENLVGRPTKGLKHQLSQESPGESVEVKRKNLLSKETQ 423
E Q + I + + N +E+ + + K L+++L + E +R LS E
Sbjct: 207 EFQSKLLIRENEINKRELKMNGKEDDLKKREKDLENRLLKVEEHEKSLNERATKLS-EAN 265
Query: 424 ANLDTKISEDDLTNPKGASEKYWQILAEKRQLALQDALDENEKLRKTIEELKEENASLKQ 603
N + + E + K A ++ + +E + A Q E ++L ++E+ + A KQ
Sbjct: 266 ENFNNRFKEFE-EREKSAIKQNKEQSSEGSKTANQT--HEQKELINSLEKKVSDIALEKQ 322
Query: 604 MLEEANSFVEIIKEELA 654
+LEEA ++ E A
Sbjct: 323 LLEEAVERYKLAMVEFA 339
>SPBC365.11 |||GRIP domain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 266
Score = 31.5 bits (68), Expect = 0.17
Identities = 24/107 (22%), Positives = 50/107 (46%), Gaps = 3/107 (2%)
Frame = +1
Query: 337 KGLKHQLSQESPGESVEVKRKNLLSKETQANLDTKISE---DDLTNPKGASEKYWQILAE 507
K K++ +++ G S + N L ++ ++D+K E D+ + K L
Sbjct: 39 KKRKNRKKKKNNGPSEQFVGNNDLEEQRSGSIDSKDKEKPLDEKVKELENANKTLSDLVR 98
Query: 508 KRQLALQDALDENEKLRKTIEELKEENASLKQMLEEANSFVEIIKEE 648
+ Q+ +A + E + K+E+ +K+ LE+++ V +KEE
Sbjct: 99 RIQIQRDEAEQKAEIYNRDALNTKQEHLDIKKRLEKSDETVCKLKEE 145
>SPCC330.11 |btb1||BTB/POZ domain protein Btb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1347
Score = 29.9 bits (64), Expect = 0.51
Identities = 29/118 (24%), Positives = 51/118 (43%), Gaps = 4/118 (3%)
Frame = +1
Query: 277 SLKTLQHSANDRENLVGRPTKGLKHQLSQESPGESV---EVKRKNLLSKETQANLDTKIS 447
S+ T Q + V + G+ + ++E V E K++ T NL TK S
Sbjct: 1163 SVATHQRGSFSSSTGVKKSFNGILREAAREEGSSQVIYQESKKRISNGSPTSWNLLTKPS 1222
Query: 448 EDDLTNPKGASE-KYWQILAEKRQLALQDALDENEKLRKTIEELKEENASLKQMLEEA 618
+ PK + +I+ E+++ ++ RKTIEE+++E K EE+
Sbjct: 1223 PRSASLPKNSQPLSISEIMTEQKEEI--ESQKRRSSFRKTIEEIQQEEEFQKWWEEES 1278
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 29.5 bits (63), Expect = 0.67
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 6/96 (6%)
Frame = +1
Query: 376 ESVEVKRKNLLSKETQANLDTKISE-----DDLTNPKGASEKYWQILAEKRQLALQDALD 540
E V+ LL E +L+ ++S+ + +T K + Y L E+ D LD
Sbjct: 681 ELVKSNDNKLLLNEQIESLNDQLSQLKTEMESVTTSKESLADYLSNLKERHN----DELD 736
Query: 541 E-NEKLRKTIEELKEENASLKQMLEEANSFVEIIKE 645
N+KLR+ E + N+SLK +EE N+ ++E
Sbjct: 737 SLNKKLRE-FEGILSSNSSLKSEIEERNNQYVTLRE 771
>SPMIT.02 |||mitochondrial DNA binding
endonuclease|Schizosaccharomyces pombe|chr
mitochondrial|||Manual
Length = 384
Score = 29.1 bits (62), Expect = 0.88
Identities = 20/44 (45%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Frame = +1
Query: 478 SEKYWQI-LAEKRQLALQDA-LDENEKLRKTIEELKEENASLKQ 603
++KYW L +K L L+DA L+ EK K +EE++ E SLKQ
Sbjct: 196 TKKYWDYYLFKKAFLILEDANLNSFEKNSK-LEEIRIEKKSLKQ 238
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 29.1 bits (62), Expect = 0.88
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 6/94 (6%)
Frame = +1
Query: 385 EVKRKNLLSKETQANLDTKISEDDLTNP--KGASEKYWQILAEKRQ----LALQDALDEN 546
+ K+K ++T A+ + SE D++ P +S K Q KR+ ALQ L+E
Sbjct: 199 QAKKKGSTGEDTLASSEVS-SEVDISTPAENDSSAKGKQAAGSKRKGPNVTALQKMLEEK 257
Query: 547 EKLRKTIEELKEENASLKQMLEEANSFVEIIKEE 648
+ + ++EE A + + + E KEE
Sbjct: 258 RAREEEEQRIREEEARIAEEEKRLAEVEEARKEE 291
>SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 750
Score = 28.7 bits (61), Expect = 1.2
Identities = 21/71 (29%), Positives = 37/71 (52%)
Frame = +1
Query: 391 KRKNLLSKETQANLDTKISEDDLTNPKGASEKYWQILAEKRQLALQDALDENEKLRKTIE 570
K +L + + + K E+DL N + + L E R+L L++ +++KLR +E
Sbjct: 489 KLTSLQEQNNEFDRQLKEQEEDLQNKE-------EELTELRKL-LREQTQDSQKLRLLVE 540
Query: 571 ELKEENASLKQ 603
+L+ E LKQ
Sbjct: 541 QLELERQDLKQ 551
>SPBP4H10.06c |cut14|smc2, smc2|condensin subunit
Cut14|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1172
Score = 28.3 bits (60), Expect = 1.5
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +1
Query: 514 QLALQDALDENEKLRKTIEELKEENASLKQMLEE 615
QL LQ E EKL +++LK +NA+ ++ +E
Sbjct: 686 QLKLQVVTSEYEKLETQLKDLKTQNANFHRLEQE 719
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 28.3 bits (60), Expect = 1.5
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 3/78 (3%)
Frame = +1
Query: 376 ESVEVKRKNLLSKETQANLDTKISEDDLTN-PKGASEKYWQILA-EKRQLALQDALDENE 549
+++ K K L D + S L+N K +EK I ++ + L D L +
Sbjct: 961 QTISSKYKELEKDYLNIMADYQHSSQHLSNLEKAINEKNLNIRELNEKLMRLDDELLLKQ 1020
Query: 550 KLRKT-IEELKEENASLK 600
+ T ++EL+EENASLK
Sbjct: 1021 RSYDTKVQELREENASLK 1038
Score = 25.8 bits (54), Expect = 8.2
Identities = 29/123 (23%), Positives = 56/123 (45%), Gaps = 1/123 (0%)
Frame = +1
Query: 244 EPQESIRITRRSLKTLQHSANDRENLVGRPTKGLKHQL-SQESPGESVEVKRKNLLSKET 420
E +E+ + R+ TL + E + ++ L + S P + +E++++ L K
Sbjct: 1836 EVREANQTLRKDQDTLLRENRNLERKLHEVSEQLNKKFDSSARPFDEIEMEKEVLTLK-- 1893
Query: 421 QANLDTKISEDDLTNPKGASEKYWQILAEKRQLALQDALDENEKLRKTIEELKEENASLK 600
+NL K DDL + K ++ A K Q + +EN +L + + L++E L+
Sbjct: 1894 -SNLAQK---DDLLSSLVERIKQIEMFALKTQKDSNNHREENLQLHRQLGVLQKEKKDLE 1949
Query: 601 QML 609
L
Sbjct: 1950 LKL 1952
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 27.5 bits (58), Expect = 2.7
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = -1
Query: 364 LAKVDVSVLSLVYPPNFPYHLLNVVMSSV 278
L KVD +L L PPN YH L V+ V
Sbjct: 268 LNKVDRLILELRLPPNDAYHKLRHVIDEV 296
>SPAC18B11.10 |tup11||transcriptional corepressor
Tup11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 27.5 bits (58), Expect = 2.7
Identities = 12/47 (25%), Positives = 28/47 (59%)
Frame = +1
Query: 523 LQDALDENEKLRKTIEELKEENASLKQMLEEANSFVEIIKEELAXDS 663
+Q + E E RKT++++ E+ S+++ E+ + ++ EEL ++
Sbjct: 43 IQSQIQEIEAFRKTVDDMYEKQKSIRETYEKDINKLKRELEELGVEA 89
>SPBC651.09c |||RNA polymerase II associated Paf1 complex
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 560
Score = 27.1 bits (57), Expect = 3.6
Identities = 17/68 (25%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Frame = +1
Query: 499 LAEKRQLALQDALDENEKLRKTIEELKEENASLKQMLEE--ANSFVEIIKEELAXDSXND 672
L ++RQ ++ E + R + + +E+N S K EE + S+ E E+++ D+ +
Sbjct: 156 LKKRRQERSARSVSERTRKRSPVSDYEEQNESEKSEEEEGYSPSYAEEKVEQVSKDNASA 215
Query: 673 TGIDVNDV 696
D+N +
Sbjct: 216 NLYDLNAI 223
>SPAC1834.08 |mak1|phk3|histidine kinase Mak1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1639
Score = 27.1 bits (57), Expect = 3.6
Identities = 22/98 (22%), Positives = 44/98 (44%)
Frame = +1
Query: 430 LDTKISEDDLTNPKGASEKYWQILAEKRQLALQDALDENEKLRKTIEELKEENASLKQML 609
L+T++S + L+ + + +L + D LD + K+R + +L + S++ M+
Sbjct: 1020 LETQMSAEQLSYARIIQQSAKSLLT-----VINDILDLS-KVRAGMMKLTSQRFSVRAMM 1073
Query: 610 EEANSFVEIIKEELAXDSXNDTGIDVNDVSTADEXXKR 723
E+AN + + + IDV D+ D R
Sbjct: 1074 EDANETLGTLAFSKGIELNYTVDIDVPDIVFGDNMRMR 1111
>SPCC895.07 |alp14|mtc1|Mad2-dependent spindle checkpoint component
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 809
Score = 27.1 bits (57), Expect = 3.6
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +1
Query: 520 ALQDALDENEKLRKTIEELKEENASLKQMLEE 615
+L+ ENE+LR+ ++ EEN S+++ L E
Sbjct: 651 SLESLKRENEELREQLKVEHEENISMQKQLSE 682
>SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 803
Score = 27.1 bits (57), Expect = 3.6
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +1
Query: 532 ALDENEKLRKTIEELKEENASLKQMLEEANSFVEIIKE 645
+++ EKL + +LKEE L EE ++ IK+
Sbjct: 370 SVERREKLESKLTDLKEEQDKLSAAWEEERKLLDSIKK 407
>SPBC16C6.06 |pep1|vps10|sorting receptor for
CPY|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1466
Score = 27.1 bits (57), Expect = 3.6
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = +1
Query: 46 FDIPT*SNQNVLSYFRYFVYRDCFLIYEFI*SCEKYRFEYD 168
F P+ NQN S F + R +L+Y +CEK F D
Sbjct: 790 FKAPSPPNQNGKSLFSFHPSRPAWLLYAGSENCEKNPFADD 830
>SPAC4F10.08 |mug126||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 436
Score = 26.6 bits (56), Expect = 4.7
Identities = 18/113 (15%), Positives = 52/113 (46%)
Frame = +1
Query: 229 KMSSHEPQESIRITRRSLKTLQHSANDRENLVGRPTKGLKHQLSQESPGESVEVKRKNLL 408
K +S +E ++ + L+T+Q + + + + Q Q++ + + ++
Sbjct: 163 KKTSTVQEEELQNAGKKLETVQENPQAYSKVTQQ-----EPQAGQKAVPQEPQANQQETS 217
Query: 409 SKETQANLDTKISEDDLTNPKGASEKYWQILAEKRQLALQDALDENEKLRKTI 567
S + +++ D + ++DD PK ++++ L + Q + ++ + + R I
Sbjct: 218 SNQEESSFDRQETQDDKQKPKTTQQEHYN-LRNRNQATITNSNSKPQTRRSKI 269
>SPBC409.21 |sec66||ER protein translocation subcomplex subunit
Sec66 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 192
Score = 26.6 bits (56), Expect = 4.7
Identities = 12/47 (25%), Positives = 22/47 (46%)
Frame = +1
Query: 541 ENEKLRKTIEELKEENASLKQMLEEANSFVEIIKEELAXDSXNDTGI 681
ENEK+ I+ + ++ S+ Q + E EEL + + G+
Sbjct: 145 ENEKIHSIIDNIPKDIDSISQRWQTEKILYEAADEELRIQAQKELGV 191
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 26.6 bits (56), Expect = 4.7
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +1
Query: 439 KISEDDLTNPKGASEKYWQILAEKRQLALQDALDENEKLRKTIEELKEENASLKQMLEE 615
K+ DL N K +I++ +RQL EN+KL++T+E A L++ + E
Sbjct: 1158 KLGLSDLQNHVKRISKEMEIISCQRQLLFL----ENKKLKRTVESSNRVIADLQRGITE 1212
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 26.6 bits (56), Expect = 4.7
Identities = 31/146 (21%), Positives = 67/146 (45%), Gaps = 6/146 (4%)
Frame = +1
Query: 229 KMSSHEPQESIRITRRSLKTLQHSANDRENLVGRPTKGLKHQLSQESPGESVEVKRKNLL 408
+ S+ + +E + + S +T+ D E+ + + +S S++ + NL
Sbjct: 363 RTSNSQLEEEMVELKESNRTIHSQLTDAESKLS------SFEQENKSLKGSIDEYQNNLS 416
Query: 409 SKETQANLDTKISEDDLTNPKGASEKYWQILAEK--RQLALQDALDENEKLRKTIE---- 570
SK+ + E+ ++ A+ K +I +E+ + ++D + LR +
Sbjct: 417 SKDKMVKQVSSQLEEARSSLAHATGKLAEINSERDFQNKKIKDFEKIEQDLRACLNSSSN 476
Query: 571 ELKEENASLKQMLEEANSFVEIIKEE 648
ELKE++A + + +E N+ E IKE+
Sbjct: 477 ELKEKSALIDKKDQELNNLREQIKEQ 502
>SPAC15A10.02 |taf12||transcription factor TFIID complex subunit A
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 450
Score = 26.2 bits (55), Expect = 6.2
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Frame = +1
Query: 493 QILAEKRQLALQDALDENEKLRKTIEELKEENASLKQMLEEANSFVEIIKE---ELAXDS 663
++L++++ L +D EK+ +EEL +LE A+ FVE + LA
Sbjct: 341 RLLSKRKLHDLLQQIDSEEKIEPEVEEL---------LLEIADEFVESVTNFACRLAKHR 391
Query: 664 XNDTGIDVNDV 696
+DT +DV DV
Sbjct: 392 KSDT-LDVRDV 401
>SPAC3C7.09 |set8||lysine methyltransferase Set8
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 429
Score = 26.2 bits (55), Expect = 6.2
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +1
Query: 454 DLTNPKGASEKYWQILAEKRQLALQDALDENEKL 555
DL N S W + QL L +DENE++
Sbjct: 194 DLCNHSSKSNAKWSFSEDAMQLYLDKDIDENEEV 227
>SPCC338.03c |||dubious|Schizosaccharomyces pombe|chr 3|||Manual
Length = 141
Score = 25.8 bits (54), Expect = 8.2
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +1
Query: 499 LAEKRQLALQDALDENEKLRKTIEELKEENASLKQMLEEANSF 627
L E+R L ++L E K+ EE+ + + KQ+L EA+ F
Sbjct: 40 LREQRYEFLANSLGERTSSLKSQEEMVSVSRNGKQLLSEASFF 82
>SPCC1322.09 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 455
Score = 25.8 bits (54), Expect = 8.2
Identities = 23/113 (20%), Positives = 48/113 (42%), Gaps = 8/113 (7%)
Frame = +1
Query: 397 KNLLSKETQANLDTKISEDDLTNPKGASEKYWQILAEKRQLALQDAL--DENEKLRKTIE 570
+ L++ Q ++ + + N ++ EK L D L DE + + IE
Sbjct: 12 ETLMASLDQLGMEADPTSKEFNNDDSKIGAPSEVQDEKELLEFLDQLENDEEKNEKNPIE 71
Query: 571 ELKEENASL------KQMLEEANSFVEIIKEELAXDSXNDTGIDVNDVSTADE 711
E EEN S+ +Q + +N + + + ++ + T VN+++ + E
Sbjct: 72 EANEENESVAATSNERQQHDASNQPSQAAQTTINKNTESATPKTVNEINKSQE 124
>SPAC664.03 |||RNA polymerase II associated Paf1 complex
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 457
Score = 25.8 bits (54), Expect = 8.2
Identities = 14/64 (21%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +1
Query: 280 LKTLQHSANDRENLVGRPTKGLKH-QLSQESPGESVEVKRKNLLSKETQANLDTKISEDD 456
L++++ S N+ + +P + + + ++++ G E + +N+ + E+QAN E+
Sbjct: 383 LRSVEGSLNEELSEEEKPAESREQLESAEQTNGVKPETQAQNMSASESQANSPAPPVEEG 442
Query: 457 LTNP 468
T P
Sbjct: 443 NTQP 446
>SPBC29A10.15 |orc1|orp1, cdc30|origin recognition complex subunit
Orc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 707
Score = 25.8 bits (54), Expect = 8.2
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +1
Query: 271 RRSLKTLQHSANDRENLVGRPTKGLKHQLSQESPGESVEVKRKNL 405
RR+L + ++ EN G+ T GL HQ E ++ +NL
Sbjct: 557 RRALDICRRASELAENKNGKVTPGLIHQAISEMTASPLQKVLRNL 601
>SPBC30D10.11 |gpi1||pig-Q|Schizosaccharomyces pombe|chr 2|||Manual
Length = 653
Score = 25.8 bits (54), Expect = 8.2
Identities = 21/80 (26%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Frame = +1
Query: 391 KRKNLLSKETQANLDTKISEDDLTNPKGASEKYWQILAEKRQLALQDALDENEK--LRKT 564
++ LS E + L K S + +NP+ S ++ QIL +K +L + + K LR
Sbjct: 135 RKMQFLSLEPLSLLLLKDSFINKSNPEYESMQHQQILLKKLKLHFPRRKENSWKRSLRSG 194
Query: 565 IEELKEENASLKQMLEEANS 624
+ EL ++ ++ + E N+
Sbjct: 195 LIELLNQSFEVRMLTHENNN 214
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 25.8 bits (54), Expect = 8.2
Identities = 18/80 (22%), Positives = 38/80 (47%)
Frame = +1
Query: 412 KETQANLDTKISEDDLTNPKGASEKYWQILAEKRQLALQDALDENEKLRKTIEELKEENA 591
K + + +T++ D T S+K AEK +L + ++L +R +EEL +E
Sbjct: 191 KGLKRDQETQVKVDQATLTHYRSDKE---RAEKIELRVHESLKRISCIRSKVEELDQEIT 247
Query: 592 SLKQMLEEANSFVEIIKEEL 651
++ +E E ++++
Sbjct: 248 ETARLQDELFKSTEEYEQQM 267
>SPAC694.06c |mrc1||mediator of replication checkpoint 1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1019
Score = 25.8 bits (54), Expect = 8.2
Identities = 21/77 (27%), Positives = 34/77 (44%)
Frame = +1
Query: 415 ETQANLDTKISEDDLTNPKGASEKYWQILAEKRQLALQDALDENEKLRKTIEELKEENAS 594
E + N K ED + N + K + +E + D DE+E +K + K NAS
Sbjct: 150 EKKRNALKKEQEDLIQNSATSHSKSDNLDSESADDS--DLADESELSKKYTSDRKIRNAS 207
Query: 595 LKQMLEEANSFVEIIKE 645
K +LE + + +E
Sbjct: 208 KKALLELHRNTARLTRE 224
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,706,482
Number of Sequences: 5004
Number of extensions: 51549
Number of successful extensions: 227
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 213
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 225
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 446488370
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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