SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_B05
         (886 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061508-1|AAL29056.1|  299|Drosophila melanogaster LD46344p pro...   212   6e-55
AE013599-2777|AAM68447.1|  243|Drosophila melanogaster CG15081-P...   208   6e-54
AE013599-2776|AAF57631.2|  243|Drosophila melanogaster CG15081-P...   208   6e-54
AE013599-2775|AAF57632.2|  243|Drosophila melanogaster CG15081-P...   208   6e-54
AY122111-1|AAM52623.1|  276|Drosophila melanogaster GH12454p pro...   132   8e-31
AE014134-3047|AAF53765.1|  276|Drosophila melanogaster CG10691-P...   132   8e-31
AE014134-3046|AAN11026.1|  276|Drosophila melanogaster CG10691-P...   132   8e-31
X04228-3|CAA27810.1|  203|Drosophila melanogaster protein ( Dros...    54   2e-07
X04227-3|CAA27807.1|  203|Drosophila melanogaster URF 3 protein.       54   2e-07
BT010318-1|AAQ23636.1|  342|Drosophila melanogaster AT20211p pro...    31   1.6  
AE014296-2601|AAF49563.2|  342|Drosophila melanogaster CG10516-P...    31   1.6  
BT021220-1|AAX33368.1| 1056|Drosophila melanogaster RH61118p pro...    29   6.5  
AY119177-1|AAM51037.1| 1024|Drosophila melanogaster RH63546p pro...    29   6.5  
AE014298-1160|AAF46357.2| 1056|Drosophila melanogaster CG1632-PA...    29   6.5  

>AY061508-1|AAL29056.1|  299|Drosophila melanogaster LD46344p
           protein.
          Length = 299

 Score =  212 bits (517), Expect = 6e-55
 Identities = 120/242 (49%), Positives = 141/242 (58%), Gaps = 1/242 (0%)
 Frame = +1

Query: 148 MAQSKINDMAGKFAXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTVEGGHRAIMXNRIGGV 327
           MAQSK+ND+AGK                               TVEGGHRAI+ +R+GG+
Sbjct: 1   MAQSKLNDLAGKLGKGGPPGLGIGLKVLAAVGAAAYGVSQSLYTVEGGHRAIIFSRLGGI 60

Query: 328 QQHVFTEXMHFRIPWFQYPSHL*YQIPTSARYLPRLV-QKIYRW*TFPSEYFLDQMPIC* 504
           Q  +++E +H RIPWFQYP  + Y I +  R +      K  +              +  
Sbjct: 61  QSDIYSEGLHVRIPWFQYP--IIYDIRSRPRKISSPTGSKDLQMINISLRVLSRPDSLNL 118

Query: 505 ATMYRQLGTDYDEKVLPSICNEVLKSVVAKFNASQLITQRQQVSLLIRRELVERAADFNI 684
             +++QLG DYDEKVLPSICNEVLKSV+AKFNASQLITQRQQVSLLIR+ELVERA DFNI
Sbjct: 119 PYLHKQLGVDYDEKVLPSICNEVLKSVIAKFNASQLITQRQQVSLLIRKELVERARDFNI 178

Query: 685 ILDDVSLTELSFGXEYTXXXXXXXXXXXXXXXXXXXXXXXKXERXQKIVQAEGEXEAXXM 864
           ILDDVSLTELSFG EYT                       K E+ QKIVQAEGE EA  M
Sbjct: 179 ILDDVSLTELSFGKEYTAAIEAKQVAQQEAQRAVFFVERAKQEKQQKIVQAEGEAEAAKM 238

Query: 865 LG 870
           LG
Sbjct: 239 LG 240



 Score = 52.8 bits (121), Expect = 6e-07
 Identities = 24/26 (92%), Positives = 26/26 (100%)
 Frame = +3

Query: 417 KISSPTGSKDLQMVNISLRVLSRPDA 494
           KISSPTGSKDLQM+NISLRVLSRPD+
Sbjct: 90  KISSPTGSKDLQMINISLRVLSRPDS 115



 Score = 29.1 bits (62), Expect = 8.5
 Identities = 11/15 (73%), Positives = 13/15 (86%)
 Frame = +2

Query: 374 FNTPVIYDIRSRPRQ 418
           F  P+IYDIRSRPR+
Sbjct: 76  FQYPIIYDIRSRPRK 90


>AE013599-2777|AAM68447.1|  243|Drosophila melanogaster CG15081-PC,
           isoform C protein.
          Length = 243

 Score =  208 bits (509), Expect = 6e-54
 Identities = 118/241 (48%), Positives = 140/241 (58%), Gaps = 1/241 (0%)
 Frame = +1

Query: 148 MAQSKINDMAGKFAXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTVEGGHRAIMXNRIGGV 327
           MAQSK+ND+AGK                               TVEGGHRAI+ +R+GG+
Sbjct: 1   MAQSKLNDLAGKLGKGGPPGLGIGLKVLAAVGAAAYGVSQSLYTVEGGHRAIIFSRLGGI 60

Query: 328 QQHVFTEXMHFRIPWFQYPSHL*YQIPTSARYLPRLV-QKIYRW*TFPSEYFLDQMPIC* 504
           Q  +++E +H RIPWFQYP  + Y I +  R +      K  +              +  
Sbjct: 61  QSDIYSEGLHVRIPWFQYP--IIYDIRSRPRKISSPTGSKDLQMINISLRVLSRPDSLNL 118

Query: 505 ATMYRQLGTDYDEKVLPSICNEVLKSVVAKFNASQLITQRQQVSLLIRRELVERAADFNI 684
             +++QLG DYDEKVLPSICNEVLKSV+AKFNASQLITQRQQVSLLIR+ELVERA DFNI
Sbjct: 119 PYLHKQLGVDYDEKVLPSICNEVLKSVIAKFNASQLITQRQQVSLLIRKELVERARDFNI 178

Query: 685 ILDDVSLTELSFGXEYTXXXXXXXXXXXXXXXXXXXXXXXKXERXQKIVQAEGEXEAXXM 864
           ILDDVSLTELSFG EYT                       K E+ QKIVQAEGE EA  M
Sbjct: 179 ILDDVSLTELSFGKEYTAAIEAKQVAQQEAQRAVFFVERAKQEKQQKIVQAEGEAEAAKM 238

Query: 865 L 867
           +
Sbjct: 239 I 239



 Score = 52.8 bits (121), Expect = 6e-07
 Identities = 24/26 (92%), Positives = 26/26 (100%)
 Frame = +3

Query: 417 KISSPTGSKDLQMVNISLRVLSRPDA 494
           KISSPTGSKDLQM+NISLRVLSRPD+
Sbjct: 90  KISSPTGSKDLQMINISLRVLSRPDS 115



 Score = 29.1 bits (62), Expect = 8.5
 Identities = 11/15 (73%), Positives = 13/15 (86%)
 Frame = +2

Query: 374 FNTPVIYDIRSRPRQ 418
           F  P+IYDIRSRPR+
Sbjct: 76  FQYPIIYDIRSRPRK 90


>AE013599-2776|AAF57631.2|  243|Drosophila melanogaster CG15081-PB,
           isoform B protein.
          Length = 243

 Score =  208 bits (509), Expect = 6e-54
 Identities = 118/241 (48%), Positives = 140/241 (58%), Gaps = 1/241 (0%)
 Frame = +1

Query: 148 MAQSKINDMAGKFAXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTVEGGHRAIMXNRIGGV 327
           MAQSK+ND+AGK                               TVEGGHRAI+ +R+GG+
Sbjct: 1   MAQSKLNDLAGKLGKGGPPGLGIGLKVLAAVGAAAYGVSQSLYTVEGGHRAIIFSRLGGI 60

Query: 328 QQHVFTEXMHFRIPWFQYPSHL*YQIPTSARYLPRLV-QKIYRW*TFPSEYFLDQMPIC* 504
           Q  +++E +H RIPWFQYP  + Y I +  R +      K  +              +  
Sbjct: 61  QSDIYSEGLHVRIPWFQYP--IIYDIRSRPRKISSPTGSKDLQMINISLRVLSRPDSLNL 118

Query: 505 ATMYRQLGTDYDEKVLPSICNEVLKSVVAKFNASQLITQRQQVSLLIRRELVERAADFNI 684
             +++QLG DYDEKVLPSICNEVLKSV+AKFNASQLITQRQQVSLLIR+ELVERA DFNI
Sbjct: 119 PYLHKQLGVDYDEKVLPSICNEVLKSVIAKFNASQLITQRQQVSLLIRKELVERARDFNI 178

Query: 685 ILDDVSLTELSFGXEYTXXXXXXXXXXXXXXXXXXXXXXXKXERXQKIVQAEGEXEAXXM 864
           ILDDVSLTELSFG EYT                       K E+ QKIVQAEGE EA  M
Sbjct: 179 ILDDVSLTELSFGKEYTAAIEAKQVAQQEAQRAVFFVERAKQEKQQKIVQAEGEAEAAKM 238

Query: 865 L 867
           +
Sbjct: 239 I 239



 Score = 52.8 bits (121), Expect = 6e-07
 Identities = 24/26 (92%), Positives = 26/26 (100%)
 Frame = +3

Query: 417 KISSPTGSKDLQMVNISLRVLSRPDA 494
           KISSPTGSKDLQM+NISLRVLSRPD+
Sbjct: 90  KISSPTGSKDLQMINISLRVLSRPDS 115



 Score = 29.1 bits (62), Expect = 8.5
 Identities = 11/15 (73%), Positives = 13/15 (86%)
 Frame = +2

Query: 374 FNTPVIYDIRSRPRQ 418
           F  P+IYDIRSRPR+
Sbjct: 76  FQYPIIYDIRSRPRK 90


>AE013599-2775|AAF57632.2|  243|Drosophila melanogaster CG15081-PA,
           isoform A protein.
          Length = 243

 Score =  208 bits (509), Expect = 6e-54
 Identities = 118/241 (48%), Positives = 140/241 (58%), Gaps = 1/241 (0%)
 Frame = +1

Query: 148 MAQSKINDMAGKFAXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTVEGGHRAIMXNRIGGV 327
           MAQSK+ND+AGK                               TVEGGHRAI+ +R+GG+
Sbjct: 1   MAQSKLNDLAGKLGKGGPPGLGIGLKVLAAVGAAAYGVSQSLYTVEGGHRAIIFSRLGGI 60

Query: 328 QQHVFTEXMHFRIPWFQYPSHL*YQIPTSARYLPRLV-QKIYRW*TFPSEYFLDQMPIC* 504
           Q  +++E +H RIPWFQYP  + Y I +  R +      K  +              +  
Sbjct: 61  QSDIYSEGLHVRIPWFQYP--IIYDIRSRPRKISSPTGSKDLQMINISLRVLSRPDSLNL 118

Query: 505 ATMYRQLGTDYDEKVLPSICNEVLKSVVAKFNASQLITQRQQVSLLIRRELVERAADFNI 684
             +++QLG DYDEKVLPSICNEVLKSV+AKFNASQLITQRQQVSLLIR+ELVERA DFNI
Sbjct: 119 PYLHKQLGVDYDEKVLPSICNEVLKSVIAKFNASQLITQRQQVSLLIRKELVERARDFNI 178

Query: 685 ILDDVSLTELSFGXEYTXXXXXXXXXXXXXXXXXXXXXXXKXERXQKIVQAEGEXEAXXM 864
           ILDDVSLTELSFG EYT                       K E+ QKIVQAEGE EA  M
Sbjct: 179 ILDDVSLTELSFGKEYTAAIEAKQVAQQEAQRAVFFVERAKQEKQQKIVQAEGEAEAAKM 238

Query: 865 L 867
           +
Sbjct: 239 I 239



 Score = 52.8 bits (121), Expect = 6e-07
 Identities = 24/26 (92%), Positives = 26/26 (100%)
 Frame = +3

Query: 417 KISSPTGSKDLQMVNISLRVLSRPDA 494
           KISSPTGSKDLQM+NISLRVLSRPD+
Sbjct: 90  KISSPTGSKDLQMINISLRVLSRPDS 115



 Score = 29.1 bits (62), Expect = 8.5
 Identities = 11/15 (73%), Positives = 13/15 (86%)
 Frame = +2

Query: 374 FNTPVIYDIRSRPRQ 418
           F  P+IYDIRSRPR+
Sbjct: 76  FQYPIIYDIRSRPRK 90


>AY122111-1|AAM52623.1|  276|Drosophila melanogaster GH12454p
           protein.
          Length = 276

 Score =  132 bits (318), Expect = 8e-31
 Identities = 76/199 (38%), Positives = 108/199 (54%), Gaps = 1/199 (0%)
 Frame = +1

Query: 280 VEGGHRAIMXNRIGGVQQHVFTEXMHFRIPWFQYPSHL*YQIPTSARYLPRLV-QKIYRW 456
           VEGGHRA++ +R  G++++V  E  HF IPW Q P  + + I +  R +P +   K  + 
Sbjct: 30  VEGGHRAVIFDRFTGIKENVVGEGTHFFIPWVQRP--IIFDIRSQPRNVPVITGSKDLQN 87

Query: 457 *TFPSEYFLDQMPIC*ATMYRQLGTDYDEKVLPSICNEVLKSVVAKFNASQLITQRQQVS 636
                      +P     +Y  LG DYDE+VLPSI  EVLK+VVA+F+A +LITQR+ VS
Sbjct: 88  VNITLRILYRPIPDQLPKIYTILGQDYDERVLPSIAPEVLKAVVAQFDAGELITQREMVS 147

Query: 637 LLIRRELVERAADFNIILDDVSLTELSFGXEYTXXXXXXXXXXXXXXXXXXXXXXXKXER 816
             + +EL  RA  F  ILDD+SLT L+FG E+T                       + ++
Sbjct: 148 QRVSQELTVRAKQFGFILDDISLTHLTFGREFTLAVEMKQVAQQEAEKARFVVEKAEQQK 207

Query: 817 XQKIVQAEGEXEAXXMLGK 873
              I+ AEG+ EA  +L K
Sbjct: 208 LASIISAEGDAEAAGLLAK 226


>AE014134-3047|AAF53765.1|  276|Drosophila melanogaster CG10691-PB,
           isoform B protein.
          Length = 276

 Score =  132 bits (318), Expect = 8e-31
 Identities = 76/199 (38%), Positives = 108/199 (54%), Gaps = 1/199 (0%)
 Frame = +1

Query: 280 VEGGHRAIMXNRIGGVQQHVFTEXMHFRIPWFQYPSHL*YQIPTSARYLPRLV-QKIYRW 456
           VEGGHRA++ +R  G++++V  E  HF IPW Q P  + + I +  R +P +   K  + 
Sbjct: 30  VEGGHRAVIFDRFTGIKENVVGEGTHFFIPWVQRP--IIFDIRSQPRNVPVITGSKDLQN 87

Query: 457 *TFPSEYFLDQMPIC*ATMYRQLGTDYDEKVLPSICNEVLKSVVAKFNASQLITQRQQVS 636
                      +P     +Y  LG DYDE+VLPSI  EVLK+VVA+F+A +LITQR+ VS
Sbjct: 88  VNITLRILYRPIPDQLPKIYTILGQDYDERVLPSIAPEVLKAVVAQFDAGELITQREMVS 147

Query: 637 LLIRRELVERAADFNIILDDVSLTELSFGXEYTXXXXXXXXXXXXXXXXXXXXXXXKXER 816
             + +EL  RA  F  ILDD+SLT L+FG E+T                       + ++
Sbjct: 148 QRVSQELTVRAKQFGFILDDISLTHLTFGREFTLAVEMKQVAQQEAEKARFVVEKAEQQK 207

Query: 817 XQKIVQAEGEXEAXXMLGK 873
              I+ AEG+ EA  +L K
Sbjct: 208 LASIISAEGDAEAAGLLAK 226


>AE014134-3046|AAN11026.1|  276|Drosophila melanogaster CG10691-PA,
           isoform A protein.
          Length = 276

 Score =  132 bits (318), Expect = 8e-31
 Identities = 76/199 (38%), Positives = 108/199 (54%), Gaps = 1/199 (0%)
 Frame = +1

Query: 280 VEGGHRAIMXNRIGGVQQHVFTEXMHFRIPWFQYPSHL*YQIPTSARYLPRLV-QKIYRW 456
           VEGGHRA++ +R  G++++V  E  HF IPW Q P  + + I +  R +P +   K  + 
Sbjct: 30  VEGGHRAVIFDRFTGIKENVVGEGTHFFIPWVQRP--IIFDIRSQPRNVPVITGSKDLQN 87

Query: 457 *TFPSEYFLDQMPIC*ATMYRQLGTDYDEKVLPSICNEVLKSVVAKFNASQLITQRQQVS 636
                      +P     +Y  LG DYDE+VLPSI  EVLK+VVA+F+A +LITQR+ VS
Sbjct: 88  VNITLRILYRPIPDQLPKIYTILGQDYDERVLPSIAPEVLKAVVAQFDAGELITQREMVS 147

Query: 637 LLIRRELVERAADFNIILDDVSLTELSFGXEYTXXXXXXXXXXXXXXXXXXXXXXXKXER 816
             + +EL  RA  F  ILDD+SLT L+FG E+T                       + ++
Sbjct: 148 QRVSQELTVRAKQFGFILDDISLTHLTFGREFTLAVEMKQVAQQEAEKARFVVEKAEQQK 207

Query: 817 XQKIVQAEGEXEAXXMLGK 873
              I+ AEG+ EA  +L K
Sbjct: 208 LASIISAEGDAEAAGLLAK 226


>X04228-3|CAA27810.1|  203|Drosophila melanogaster protein (
           Drosophila mRNA forCc gene from dopa decarboxylase gene
           cluster;  mapping2.0 kb from the 5'end of Ddc gene.  ).
          Length = 203

 Score = 54.4 bits (125), Expect = 2e-07
 Identities = 40/123 (32%), Positives = 57/123 (46%)
 Frame = +1

Query: 484 DQMPIC*ATMYRQLGTDYDEKVLPSICNEVLKSVVAKFNASQLITQRQQVSLLIRRELVE 663
           DQ+P     +Y  LG DYDE+VLPSI             A ++++QR      + +EL  
Sbjct: 43  DQLP----KIYTILGQDYDERVLPSI-------------APEMVSQR------VSQELTV 79

Query: 664 RAADFNIILDDVSLTELSFGXEYTXXXXXXXXXXXXXXXXXXXXXXXKXERXQKIVQAEG 843
           RA  F  ILDD+SLT L+FG E+T                       + ++   I+ AEG
Sbjct: 80  RAKQFGFILDDISLTHLTFGREFTLAVEMKQVAQQEAEKARFVVEKAEQQKLASIISAEG 139

Query: 844 EXE 852
           + E
Sbjct: 140 DAE 142



 Score = 34.3 bits (75), Expect = 0.23
 Identities = 16/24 (66%), Positives = 19/24 (79%)
 Frame = +3

Query: 432 TGSKDLQMVNISLRVLSRPDANML 503
           TGSKDLQ VNI+LR+L RP  + L
Sbjct: 22  TGSKDLQNVNITLRILYRPIPDQL 45


>X04227-3|CAA27807.1|  203|Drosophila melanogaster URF 3 protein.
          Length = 203

 Score = 54.4 bits (125), Expect = 2e-07
 Identities = 40/123 (32%), Positives = 57/123 (46%)
 Frame = +1

Query: 484 DQMPIC*ATMYRQLGTDYDEKVLPSICNEVLKSVVAKFNASQLITQRQQVSLLIRRELVE 663
           DQ+P     +Y  LG DYDE+VLPSI             A ++++QR      + +EL  
Sbjct: 43  DQLP----KIYTILGQDYDERVLPSI-------------APEMVSQR------VSQELTV 79

Query: 664 RAADFNIILDDVSLTELSFGXEYTXXXXXXXXXXXXXXXXXXXXXXXKXERXQKIVQAEG 843
           RA  F  ILDD+SLT L+FG E+T                       + ++   I+ AEG
Sbjct: 80  RAKQFGFILDDISLTHLTFGREFTLAVEMKQVAQQEAEKARFVVEKAEQQKLASIISAEG 139

Query: 844 EXE 852
           + E
Sbjct: 140 DAE 142



 Score = 34.3 bits (75), Expect = 0.23
 Identities = 16/24 (66%), Positives = 19/24 (79%)
 Frame = +3

Query: 432 TGSKDLQMVNISLRVLSRPDANML 503
           TGSKDLQ VNI+LR+L RP  + L
Sbjct: 22  TGSKDLQNVNITLRILYRPIPDQL 45


>BT010318-1|AAQ23636.1|  342|Drosophila melanogaster AT20211p
           protein.
          Length = 342

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
 Frame = +1

Query: 472 EYFLDQMPIC*ATMYRQLGTDYDEKVLPSICNEVLKSVVAKFN-ASQLIT-QRQQVSLLI 645
           E++L++  +     Y  + TD D K+ P +C+   KSV+   N  SQ +T Q +    L 
Sbjct: 176 EFYLNRRSL--GVAYTNVPTDPDVKIYPMVCSTAAKSVIRLINCTSQPVTLQLRSFQALS 233

Query: 646 RREL 657
           R+ L
Sbjct: 234 RQPL 237


>AE014296-2601|AAF49563.2|  342|Drosophila melanogaster CG10516-PA
           protein.
          Length = 342

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
 Frame = +1

Query: 472 EYFLDQMPIC*ATMYRQLGTDYDEKVLPSICNEVLKSVVAKFN-ASQLIT-QRQQVSLLI 645
           E++L++  +     Y  + TD D K+ P +C+   KSV+   N  SQ +T Q +    L 
Sbjct: 176 EFYLNRRSL--GVAYTNVPTDPDVKIYPMVCSTAAKSVIRLINCTSQPVTLQLRSFQALS 233

Query: 646 RREL 657
           R+ L
Sbjct: 234 RQPL 237


>BT021220-1|AAX33368.1| 1056|Drosophila melanogaster RH61118p
           protein.
          Length = 1056

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 14/46 (30%), Positives = 20/46 (43%)
 Frame = +2

Query: 428 PDWFKRFTDGKHFPPSTFSTRCQYARQQCTDNLEQIMMKRFCHLYA 565
           P  F++F D + FP ST +  C       +D    +   R C  YA
Sbjct: 477 PQRFRQFFDCERFPESTGTQSCHQKPHCVSDMQSNVQSPRLCDGYA 522


>AY119177-1|AAM51037.1| 1024|Drosophila melanogaster RH63546p
           protein.
          Length = 1024

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 14/46 (30%), Positives = 20/46 (43%)
 Frame = +2

Query: 428 PDWFKRFTDGKHFPPSTFSTRCQYARQQCTDNLEQIMMKRFCHLYA 565
           P  F++F D + FP ST +  C       +D    +   R C  YA
Sbjct: 445 PQRFRQFFDCERFPESTGTQSCHQKPHCVSDMQSNVQSPRLCDGYA 490


>AE014298-1160|AAF46357.2| 1056|Drosophila melanogaster CG1632-PA
           protein.
          Length = 1056

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 14/46 (30%), Positives = 20/46 (43%)
 Frame = +2

Query: 428 PDWFKRFTDGKHFPPSTFSTRCQYARQQCTDNLEQIMMKRFCHLYA 565
           P  F++F D + FP ST +  C       +D    +   R C  YA
Sbjct: 477 PQRFRQFFDCERFPESTGTQSCHQKPHCVSDMQSNVQSPRLCDGYA 522


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,027,500
Number of Sequences: 53049
Number of extensions: 628954
Number of successful extensions: 1318
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1260
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1299
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4311772920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -