Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP17_F_B04
(937 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein. 31 0.038
AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubu... 28 0.35
AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha ... 27 1.1
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 26 1.4
AJ439060-4|CAD27755.1| 151|Anopheles gambiae putative sRNP prot... 26 1.4
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ... 26 1.4
AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific tran... 25 3.3
>DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein.
Length = 889
Score = 31.5 bits (68), Expect = 0.038
Identities = 25/80 (31%), Positives = 25/80 (31%), Gaps = 5/80 (6%)
Frame = +2
Query: 704 PPPGPXXKKXPP----PXXGXXTPPGNXXNPGXFP-PXXPPRGPXXVPXPAXXPXXXAXP 868
PPPG PP P P NP P P P P PA P P
Sbjct: 534 PPPGGAVLNIPPQFLPPPLNLLRAPFFPLNPAQLRFPAGFPNLPNAQPPPAPPPPPPMGP 593
Query: 869 SPXXGGGGXXPXXPPGGGSP 928
P GG P P G P
Sbjct: 594 PPSPLAGG--PLGGPAGSRP 611
Score = 26.2 bits (55), Expect = 1.4
Identities = 13/40 (32%), Positives = 14/40 (35%)
Frame = +3
Query: 762 PXGXXXIPGXSPXXXPPXAPXXXPPXPXXRXXXPXXPPXG 881
P G +P P PP P PP P P P G
Sbjct: 570 PAGFPNLPNAQPPPAPPPPPPMGPP-PSPLAGGPLGGPAG 608
Score = 25.8 bits (54), Expect = 1.9
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -1
Query: 913 GGXXGXXPPPPPXG 872
GG G PPPPP G
Sbjct: 525 GGPLGPPPPPPPGG 538
Score = 24.6 bits (51), Expect = 4.4
Identities = 14/46 (30%), Positives = 17/46 (36%)
Frame = -2
Query: 357 KAXXXPIXPKKXFFPXXLXGGGPXPPKXXXXXGAXXPPPXGGAPXP 220
+A P+ P + FP G P P PPP G P P
Sbjct: 556 RAPFFPLNPAQLRFP----AGFPNLPNAQPPPAPPPPPPMGPPPSP 597
Score = 23.8 bits (49), Expect = 7.6
Identities = 15/40 (37%), Positives = 15/40 (37%), Gaps = 1/40 (2%)
Frame = +3
Query: 795 PXXXPPXAPXXXPPXPXXRXXXP-XXPPXGGGGGXFPXXP 911
P PP AP PP P P P GG G P P
Sbjct: 577 PNAQPPPAP--PPPPPMGPPPSPLAGGPLGGPAGSRPPLP 614
>AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubule
binding protein protein.
Length = 838
Score = 28.3 bits (60), Expect = 0.35
Identities = 26/109 (23%), Positives = 32/109 (29%), Gaps = 4/109 (3%)
Frame = +2
Query: 599 PXXRGXPREKXFXPRAXXGPXXXKGPXXXVFSXXAPPPGPXXKKXP--PPXXGXXTPPGN 772
P + P ++ P P + P + AP + P PP PPGN
Sbjct: 140 PQQQQHPHQRDTGPALFPAPISHRPPP--IAHQQAPFAMDPARPNPGMPPGPQMMRPPGN 197
Query: 773 XXNPGXFPP--XXPPRGPXXVPXPAXXPXXXAXPSPXXGGGGXXPXXPP 913
P P PPR P P P P G P P
Sbjct: 198 VGPPRTGTPTQPQPPRPGGMYPQPPGVPMPMRPQMPPGAVPGMQPGMQP 246
Score = 25.0 bits (52), Expect = 3.3
Identities = 14/47 (29%), Positives = 14/47 (29%)
Frame = -2
Query: 921 PPPGGXXGXXPPPPXXGXGXAXXXGXXAGXGTXXGPRGGXXGGXXPG 781
PPPGG P G G G GG GG G
Sbjct: 495 PPPGGRPNAPNPSSAVTPGGGRAEGDKVTFQIPNGGGGGGGGGGREG 541
>AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha 1
chain precursor protein.
Length = 801
Score = 26.6 bits (56), Expect = 1.1
Identities = 20/74 (27%), Positives = 21/74 (28%)
Frame = -2
Query: 927 GXPPPGGXXGXXPPPPXXGXGXAXXXGXXAGXGTXXGPRGGXXGGXXPGXFXFPGGVXXP 748
G P P G G P G G GP+G PG G P
Sbjct: 344 GQPGPRGRDGNFGPVGLPGQKGDRGSEGLHGLKGQSGPKGEPGRDGIPGQPGIAGPAGAP 403
Query: 747 XXGGGXFXXXGPGG 706
G G GP G
Sbjct: 404 GGGEGRPGAPGPKG 417
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 26.2 bits (55), Expect = 1.4
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -3
Query: 827 PGRGXGGXXXGGXPRDXXXSXGGXXXXXXGGG 732
PG G GG GG P S GG GGG
Sbjct: 200 PGAGGGGSG-GGAPGGGGGSSGGPGPGGGGGG 230
Score = 25.8 bits (54), Expect = 1.9
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -1
Query: 928 GGXPPGGXXGXXPPPPPXGGXXG 860
GG PGG G P P GG G
Sbjct: 208 GGGAPGGGGGSSGGPGPGGGGGG 230
Score = 25.0 bits (52), Expect = 3.3
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -2
Query: 786 PGXFXFPGGVXXPXXGGGXFXXXGPGGG 703
PG G P GGG GPGGG
Sbjct: 200 PGAGGGGSGGGAPGGGGGSSGGPGPGGG 227
Score = 24.6 bits (51), Expect = 4.4
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = -2
Query: 819 GPRGGXXGGXXPGXFXFPGGVXXPXXGGG 733
G GG GG PG G P GGG
Sbjct: 201 GAGGGGSGGGAPGGGGGSSGGPGPGGGGG 229
Score = 23.8 bits (49), Expect = 7.6
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +2
Query: 872 PXXGGGGXXPXXPPGGGSPXXG 937
P GGGG P GGG G
Sbjct: 200 PGAGGGGSGGGAPGGGGGSSGG 221
Score = 23.8 bits (49), Expect = 7.6
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = -3
Query: 602 GGNXXXPPGGGXTXPPPXXTGGXGXXGG 519
GG+ PGGG GG G GG
Sbjct: 205 GGSGGGAPGGGGGSSGGPGPGGGGGGGG 232
Score = 23.8 bits (49), Expect = 7.6
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = -1
Query: 928 GGXPPGGXXGXXPPPPPXGGXXGXXXR 848
GG P GG P P GG G R
Sbjct: 209 GGAPGGGGGSSGGPGPGGGGGGGGRDR 235
>AJ439060-4|CAD27755.1| 151|Anopheles gambiae putative sRNP
protein.
Length = 151
Score = 26.2 bits (55), Expect = 1.4
Identities = 18/58 (31%), Positives = 19/58 (32%), Gaps = 1/58 (1%)
Frame = +2
Query: 701 APPPGPXXKKXPPPXXGXXTPPGNXXN-PGXFPPXXPPRGPXXVPXPAXXPXXXAXPS 871
A PP P PPP PG PG P P GP P P P+
Sbjct: 69 AGPPKPNI-SIPPPTMNMPPRPGMIPGMPGAPPLLMGPNGPLPPPMMGMRPPPMMVPT 125
>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
chain protein.
Length = 1024
Score = 26.2 bits (55), Expect = 1.4
Identities = 13/38 (34%), Positives = 15/38 (39%)
Frame = +2
Query: 707 PPGPXXKKXPPPXXGXXTPPGNXXNPGXFPPXXPPRGP 820
P P +K PP G P G+ PG P P P
Sbjct: 708 PQLPPQRKGPPGPPGFNGPKGDKGLPGLAGPAGIPGAP 745
>AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific
transcription factor FRU-MB protein.
Length = 759
Score = 25.0 bits (52), Expect = 3.3
Identities = 16/63 (25%), Positives = 17/63 (26%)
Frame = -2
Query: 891 PPPPXXGXGXAXXXGXXAGXGTXXGPRGGXXGGXXPGXFXFPGGVXXPXXGGGXFXXXGP 712
P P A G GG GG G GG+ GGG
Sbjct: 627 PIPNSSAAAAAAAVAAAVAASVSPGSGGGGGGGGGGGGSVGSGGIGSSSLGGGGGSGRSS 686
Query: 711 GGG 703
GG
Sbjct: 687 SGG 689
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 654,537
Number of Sequences: 2352
Number of extensions: 12324
Number of successful extensions: 62
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 54
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 102122397
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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