Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_B02
         (1139 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_02_0113 + 5410413-5410471,5411330-5413309,5413535-5413594,541...    33   0.32 
05_01_0584 - 5230266-5230447,5230453-5230554,5230902-5230987,523...    29   5.2  

>10_02_0113 +
           5410413-5410471,5411330-5413309,5413535-5413594,
           5416037-5418047
          Length = 1369

 Score = 33.5 bits (73), Expect = 0.32
 Identities = 11/23 (47%), Positives = 19/23 (82%)
 Frame = -1

Query: 425 RGHYQQVHSMXPGENHLDIEGHD 357
           + ++ ++HS+ PG+N LDIEGH+
Sbjct: 205 KSYFDELHSIFPGKNVLDIEGHN 227


>05_01_0584 -
           5230266-5230447,5230453-5230554,5230902-5230987,
           5232261-5232520
          Length = 209

 Score = 29.5 bits (63), Expect = 5.2
 Identities = 15/34 (44%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = -1

Query: 293 K*EVLLPSAFSHDG-HVQPHHWESDCLYHFRTKV 195
           K E++L  +F  D  HVQ HHW + C  HF ++V
Sbjct: 134 KDELILLMSFVRDAVHVQGHHWLNGC--HFSSQV 165


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,232,085
Number of Sequences: 37544
Number of extensions: 304762
Number of successful extensions: 494
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 488
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 494
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3456450016
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)