Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_B02
         (1139 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z47357-7|CAD90185.1|  191|Caenorhabditis elegans Hypothetical pr...    32   0.87 
Z47357-6|CAA87426.2|  187|Caenorhabditis elegans Hypothetical pr...    32   0.87 

>Z47357-7|CAD90185.1|  191|Caenorhabditis elegans Hypothetical
           protein ZK1128.8b protein.
          Length = 191

 Score = 31.9 bits (69), Expect = 0.87
 Identities = 25/66 (37%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
 Frame = -2

Query: 328 TXITXPCSSVSKNKRFFFLPPSVTTDTSNHIT--GSPIVYITSVQKCNIRNK*YKLI*SV 155
           T  T  CS+V KN RFF  P S T   S   T   +P   +  VQ  N+    Y+LI   
Sbjct: 118 TGNTYECSAVEKNGRFFVDPGSATGSFSVTKTEPTTPSFALLDVQADNVVTYLYRLIDDA 177

Query: 154 *KEQRI 137
            K  RI
Sbjct: 178 VKVDRI 183


>Z47357-6|CAA87426.2|  187|Caenorhabditis elegans Hypothetical
           protein ZK1128.8a protein.
          Length = 187

 Score = 31.9 bits (69), Expect = 0.87
 Identities = 25/66 (37%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
 Frame = -2

Query: 328 TXITXPCSSVSKNKRFFFLPPSVTTDTSNHIT--GSPIVYITSVQKCNIRNK*YKLI*SV 155
           T  T  CS+V KN RFF  P S T   S   T   +P   +  VQ  N+    Y+LI   
Sbjct: 114 TGNTYECSAVEKNGRFFVDPGSATGSFSVTKTEPTTPSFALLDVQADNVVTYLYRLIDDA 173

Query: 154 *KEQRI 137
            K  RI
Sbjct: 174 VKVDRI 179


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,443,245
Number of Sequences: 27780
Number of extensions: 263292
Number of successful extensions: 543
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 504
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 543
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3088599568
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)