Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP17_F_A24
(922 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5 pr... 147 4e-35
BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5 pr... 147 4e-35
BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5 pr... 147 4e-35
AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5 pr... 147 4e-35
AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5 va... 147 4e-35
AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5 va... 147 4e-35
U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5 prot... 145 2e-34
AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5 pr... 121 4e-27
BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein. 115 2e-25
>BC132972-1|AAI32973.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 147 bits (357), Expect = 4e-35
Identities = 68/117 (58%), Positives = 79/117 (67%)
Frame = +2
Query: 269 VQDKNKYNTPKYXLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 448
+QDKNKYNTPKY +IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAA
Sbjct: 38 IQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAA 97
Query: 449 AYSTXXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVXNGPXAFRCYLDVGLARTT 619
AY T EYNVE + P AF CYLD GLARTT
Sbjct: 98 AYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTT 154
Score = 76.6 bits (180), Expect = 1e-13
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +1
Query: 157 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 264
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
>BC132970-1|AAI32971.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 147 bits (357), Expect = 4e-35
Identities = 68/117 (58%), Positives = 79/117 (67%)
Frame = +2
Query: 269 VQDKNKYNTPKYXLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 448
+QDKNKYNTPKY +IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAA
Sbjct: 38 IQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAA 97
Query: 449 AYSTXXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVXNGPXAFRCYLDVGLARTT 619
AY T EYNVE + P AF CYLD GLARTT
Sbjct: 98 AYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTT 154
Score = 76.6 bits (180), Expect = 1e-13
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +1
Query: 157 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 264
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
>BC109370-1|AAI09371.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 147 bits (357), Expect = 4e-35
Identities = 68/117 (58%), Positives = 79/117 (67%)
Frame = +2
Query: 269 VQDKNKYNTPKYXLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 448
+QDKNKYNTPKY +IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAA
Sbjct: 38 IQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAA 97
Query: 449 AYSTXXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVXNGPXAFRCYLDVGLARTT 619
AY T EYNVE + P AF CYLD GLARTT
Sbjct: 98 AYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTT 154
Score = 76.6 bits (180), Expect = 1e-13
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +1
Query: 157 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 264
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
>AL162740-1|CAI22505.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 147 bits (357), Expect = 4e-35
Identities = 68/117 (58%), Positives = 79/117 (67%)
Frame = +2
Query: 269 VQDKNKYNTPKYXLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 448
+QDKNKYNTPKY +IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAA
Sbjct: 38 IQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAA 97
Query: 449 AYSTXXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVXNGPXAFRCYLDVGLARTT 619
AY T EYNVE + P AF CYLD GLARTT
Sbjct: 98 AYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTT 154
Score = 76.6 bits (180), Expect = 1e-13
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +1
Query: 157 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 264
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
>AK222604-1|BAD96324.1| 297|Homo sapiens ribosomal protein L5
variant protein.
Length = 297
Score = 147 bits (357), Expect = 4e-35
Identities = 68/117 (58%), Positives = 79/117 (67%)
Frame = +2
Query: 269 VQDKNKYNTPKYXLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 448
+QDKNKYNTPKY +IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAA
Sbjct: 38 IQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAA 97
Query: 449 AYSTXXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVXNGPXAFRCYLDVGLARTT 619
AY T EYNVE + P AF CYLD GLARTT
Sbjct: 98 AYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTT 154
Score = 76.6 bits (180), Expect = 1e-13
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +1
Query: 157 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 264
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
>AB208980-1|BAD92217.1| 303|Homo sapiens ribosomal protein L5
variant protein.
Length = 303
Score = 147 bits (357), Expect = 4e-35
Identities = 68/117 (58%), Positives = 79/117 (67%)
Frame = +2
Query: 269 VQDKNKYNTPKYXLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 448
+QDKNKYNTPKY +IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAA
Sbjct: 45 IQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAA 104
Query: 449 AYSTXXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVXNGPXAFRCYLDVGLARTT 619
AY T EYNVE + P AF CYLD GLARTT
Sbjct: 105 AYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTT 161
Score = 76.6 bits (180), Expect = 1e-13
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +1
Query: 157 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 264
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 8 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 43
>U14966-1|AAA85654.1| 297|Homo sapiens ribosomal protein L5
protein.
Length = 297
Score = 145 bits (352), Expect = 2e-34
Identities = 67/117 (57%), Positives = 78/117 (66%)
Frame = +2
Query: 269 VQDKNKYNTPKYXLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 448
+QDKNKYNTPKY +IVR++N+D+ CQ+AY+RIEGD IVCA Y+HELP+YGVKVGLTNYAA
Sbjct: 38 IQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCARYAHELPKYGVKVGLTNYAA 97
Query: 449 AYSTXXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVXNGPXAFRCYLDVGLARTT 619
AY T EYNVE + P AF CYLD GLARTT
Sbjct: 98 AYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTT 154
Score = 76.6 bits (180), Expect = 1e-13
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +1
Query: 157 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 264
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
>AL162740-2|CAI22506.1| 126|Homo sapiens ribosomal protein L5
protein.
Length = 126
Score = 121 bits (291), Expect = 4e-27
Identities = 57/104 (54%), Positives = 67/104 (64%)
Frame = +2
Query: 308 LIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTXXXXXXXXX 487
+IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY T
Sbjct: 1 MIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLL 60
Query: 488 XXXXXXXXXXXXXXXXXXEYNVEPVXNGPXAFRCYLDVGLARTT 619
EYNVE + P AF CYLD GLARTT
Sbjct: 61 NRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTT 104
>BC001882-1|AAH01882.1| 101|Homo sapiens RPL5 protein protein.
Length = 101
Score = 115 bits (277), Expect = 2e-25
Identities = 48/61 (78%), Positives = 58/61 (95%)
Frame = +2
Query: 269 VQDKNKYNTPKYXLIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAA 448
+QDKNKYNTPKY +IVR++N+D+ CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAA
Sbjct: 38 IQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAA 97
Query: 449 A 451
A
Sbjct: 98 A 98
Score = 76.6 bits (180), Expect = 1e-13
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +1
Query: 157 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRL 264
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRL
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRL 36
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,584,808
Number of Sequences: 237096
Number of extensions: 2118881
Number of successful extensions: 3026
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2898
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3018
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11992411152
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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