BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP17_F_A19
(1162 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ007509-1|CAA07548.1| 856|Homo sapiens E1B-55kDa-associated pr... 27 0.54
BC049204-1|AAH49204.1| 251|Homo sapiens homeobox B4 protein. 26 2.2
AF307160-1|AAG45052.1| 251|Homo sapiens HOXB4 protein. 26 2.2
AF287967-4|AAG31554.1| 251|Homo sapiens homeobox B4 protein. 26 2.2
AL137449-1|CAB70742.1| 246|Homo sapiens hypothetical protein pr... 26 2.2
BC002961-1|AAH02961.1| 514|Homo sapiens WAS protein protein. 26 2.7
U19927-1|AAC50140.1| 502|Homo sapiens WAS protein. 26 2.7
U12707-1|AAA62663.1| 502|Homo sapiens Wiskott-Aldrich syndrome ... 26 2.7
BC012738-1|AAH12738.1| 502|Homo sapiens Wiskott-Aldrich syndrom... 26 2.7
AF115549-1|AAD26691.1| 502|Homo sapiens Wiskott-Aldrich Syndrom... 26 2.7
U80017-3|AAC52048.1| 294|Homo sapiens survival motor neuron pro... 26 3.7
U43883-1|AAC50473.1| 294|Homo sapiens survival motor neuron pro... 26 3.7
U21914-1|AAA64505.1| 293|Homo sapiens U18423; it is not known i... 26 3.7
U18423-1|AAA66242.1| 294|Homo sapiens spinal muscular atrophy d... 26 3.7
BC062723-1|AAH62723.1| 294|Homo sapiens survival of motor neuro... 26 3.7
BC015308-1|AAH15308.1| 294|Homo sapiens survival of motor neuro... 26 3.7
AC005031-2|AAC62262.1| 294|Homo sapiens survival of motor neuro... 26 3.7
AC004999-1|AAC83178.1| 294|Homo sapiens survival motor neuron 1... 26 3.7
BC070242-1|AAH70242.1| 282|Homo sapiens survival of motor neuro... 26 3.7
BC000908-1|AAH00908.1| 282|Homo sapiens SMN1 protein protein. 26 3.7
AL591380-1|CAH71475.1| 817|Homo sapiens enabled homolog (Drosop... 26 4.4
AL356216-2|CAI22020.1| 817|Homo sapiens enabled homolog (Drosop... 26 4.4
AK127078-1|BAC86815.1| 844|Homo sapiens protein ( Homo sapiens ... 28 5.7
D87459-1|BAA13399.2| 567|Homo sapiens KIAA0269 protein. 26 5.8
BC044591-1|AAH44591.1| 559|Homo sapiens WAS protein family, mem... 26 5.9
AL590009-1|CAI12485.1| 559|Homo sapiens WAS protein family, mem... 26 5.9
AF134303-1|AAD33052.1| 559|Homo sapiens Scar1 protein. 26 5.9
>AJ007509-1|CAA07548.1| 856|Homo sapiens E1B-55kDa-associated
protein protein.
Length = 856
Score = 27.5 bits (58), Expect(2) = 0.54
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +3
Query: 708 PPPPPPPXXXFXXXGG 755
PPPPPPP + GG
Sbjct: 776 PPPPPPPAYNYGSYGG 791
Score = 26.2 bits (55), Expect(2) = 0.54
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 705 GPPPPPPP 728
GPPPPPPP
Sbjct: 773 GPPPPPPP 780
>BC049204-1|AAH49204.1| 251|Homo sapiens homeobox B4 protein.
Length = 251
Score = 26.2 bits (55), Expect(2) = 2.2
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 705 GPPPPPPP 728
GPPPPPPP
Sbjct: 72 GPPPPPPP 79
Score = 25.4 bits (53), Expect(2) = 2.2
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +3
Query: 708 PPPPPPPXXXFXXXGGPP 761
PPPPPPP PP
Sbjct: 80 PPPPPPPPGLSPRAPAPP 97
>AF307160-1|AAG45052.1| 251|Homo sapiens HOXB4 protein.
Length = 251
Score = 26.2 bits (55), Expect(2) = 2.2
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 705 GPPPPPPP 728
GPPPPPPP
Sbjct: 72 GPPPPPPP 79
Score = 25.4 bits (53), Expect(2) = 2.2
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +3
Query: 708 PPPPPPPXXXFXXXGGPP 761
PPPPPPP PP
Sbjct: 80 PPPPPPPPGLSPRAPAPP 97
>AF287967-4|AAG31554.1| 251|Homo sapiens homeobox B4 protein.
Length = 251
Score = 26.2 bits (55), Expect(2) = 2.2
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 705 GPPPPPPP 728
GPPPPPPP
Sbjct: 72 GPPPPPPP 79
Score = 25.4 bits (53), Expect(2) = 2.2
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +3
Query: 708 PPPPPPPXXXFXXXGGPP 761
PPPPPPP PP
Sbjct: 80 PPPPPPPPGLSPRAPAPP 97
>AL137449-1|CAB70742.1| 246|Homo sapiens hypothetical protein
protein.
Length = 246
Score = 26.2 bits (55), Expect(2) = 2.2
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 705 GPPPPPPP 728
GPPPPPPP
Sbjct: 67 GPPPPPPP 74
Score = 25.4 bits (53), Expect(2) = 2.2
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +3
Query: 708 PPPPPPPXXXFXXXGGPP 761
PPPPPPP PP
Sbjct: 75 PPPPPPPPGLSPRAPAPP 92
>BC002961-1|AAH02961.1| 514|Homo sapiens WAS protein protein.
Length = 514
Score = 26.2 bits (55), Expect(2) = 2.7
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 705 GPPPPPPP 728
GPPPPPPP
Sbjct: 378 GPPPPPPP 385
Score = 25.0 bits (52), Expect(2) = 2.7
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +3
Query: 708 PPPPPPPXXXFXXXGGP 758
PPPPPPP GP
Sbjct: 406 PPPPPPPPPPPSSGNGP 422
>U19927-1|AAC50140.1| 502|Homo sapiens WAS protein.
Length = 502
Score = 26.2 bits (55), Expect(2) = 2.7
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 705 GPPPPPPP 728
GPPPPPPP
Sbjct: 366 GPPPPPPP 373
Score = 25.0 bits (52), Expect(2) = 2.7
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +3
Query: 708 PPPPPPPXXXFXXXGGP 758
PPPPPPP GP
Sbjct: 394 PPPPPPPPPPPSSGNGP 410
>U12707-1|AAA62663.1| 502|Homo sapiens Wiskott-Aldrich syndrome
protein protein.
Length = 502
Score = 26.2 bits (55), Expect(2) = 2.7
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 705 GPPPPPPP 728
GPPPPPPP
Sbjct: 366 GPPPPPPP 373
Score = 25.0 bits (52), Expect(2) = 2.7
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +3
Query: 708 PPPPPPPXXXFXXXGGP 758
PPPPPPP GP
Sbjct: 394 PPPPPPPPPPPSSGNGP 410
>BC012738-1|AAH12738.1| 502|Homo sapiens Wiskott-Aldrich syndrome
(eczema-thrombocytopenia) protein.
Length = 502
Score = 26.2 bits (55), Expect(2) = 2.7
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 705 GPPPPPPP 728
GPPPPPPP
Sbjct: 366 GPPPPPPP 373
Score = 25.0 bits (52), Expect(2) = 2.7
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +3
Query: 708 PPPPPPPXXXFXXXGGP 758
PPPPPPP GP
Sbjct: 394 PPPPPPPPPPPSSGNGP 410
>AF115549-1|AAD26691.1| 502|Homo sapiens Wiskott-Aldrich Syndrome
protein protein.
Length = 502
Score = 26.2 bits (55), Expect(2) = 2.7
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 705 GPPPPPPP 728
GPPPPPPP
Sbjct: 366 GPPPPPPP 373
Score = 25.0 bits (52), Expect(2) = 2.7
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +3
Query: 708 PPPPPPPXXXFXXXGGP 758
PPPPPPP GP
Sbjct: 394 PPPPPPPPPPPSSGNGP 410
>U80017-3|AAC52048.1| 294|Homo sapiens survival motor neuron
protein SMN protein.
Length = 294
Score = 26.2 bits (55), Expect(2) = 3.7
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 705 GPPPPPPP 728
GPPPPPPP
Sbjct: 216 GPPPPPPP 223
Score = 24.6 bits (51), Expect(2) = 3.7
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +3
Query: 708 PPPPPPPXXXFXXXGGPP 761
PPPPPPP PP
Sbjct: 218 PPPPPPPPPHLLSCWLPP 235
>U43883-1|AAC50473.1| 294|Homo sapiens survival motor neuron
protein.
Length = 294
Score = 26.2 bits (55), Expect(2) = 3.7
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 705 GPPPPPPP 728
GPPPPPPP
Sbjct: 216 GPPPPPPP 223
Score = 24.6 bits (51), Expect(2) = 3.7
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +3
Query: 708 PPPPPPPXXXFXXXGGPP 761
PPPPPPP PP
Sbjct: 218 PPPPPPPPPHLLSCWLPP 235
>U21914-1|AAA64505.1| 293|Homo sapiens U18423; it is not known if
this copy of the gene protein.
Length = 293
Score = 26.2 bits (55), Expect(2) = 3.7
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 705 GPPPPPPP 728
GPPPPPPP
Sbjct: 215 GPPPPPPP 222
Score = 24.6 bits (51), Expect(2) = 3.7
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +3
Query: 708 PPPPPPPXXXFXXXGGPP 761
PPPPPPP PP
Sbjct: 217 PPPPPPPPPHLLSCWLPP 234
>U18423-1|AAA66242.1| 294|Homo sapiens spinal muscular atrophy
determining gene protein.
Length = 294
Score = 26.2 bits (55), Expect(2) = 3.7
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 705 GPPPPPPP 728
GPPPPPPP
Sbjct: 216 GPPPPPPP 223
Score = 24.6 bits (51), Expect(2) = 3.7
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +3
Query: 708 PPPPPPPXXXFXXXGGPP 761
PPPPPPP PP
Sbjct: 218 PPPPPPPPPHLLSCWLPP 235
>BC062723-1|AAH62723.1| 294|Homo sapiens survival of motor neuron
1, telomeric protein.
Length = 294
Score = 26.2 bits (55), Expect(2) = 3.7
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 705 GPPPPPPP 728
GPPPPPPP
Sbjct: 216 GPPPPPPP 223
Score = 24.6 bits (51), Expect(2) = 3.7
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +3
Query: 708 PPPPPPPXXXFXXXGGPP 761
PPPPPPP PP
Sbjct: 218 PPPPPPPPPHLLSCWLPP 235
>BC015308-1|AAH15308.1| 294|Homo sapiens survival of motor neuron
1, telomeric protein.
Length = 294
Score = 26.2 bits (55), Expect(2) = 3.7
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 705 GPPPPPPP 728
GPPPPPPP
Sbjct: 216 GPPPPPPP 223
Score = 24.6 bits (51), Expect(2) = 3.7
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +3
Query: 708 PPPPPPPXXXFXXXGGPP 761
PPPPPPP PP
Sbjct: 218 PPPPPPPPPHLLSCWLPP 235
>AC005031-2|AAC62262.1| 294|Homo sapiens survival of motor neuron 1
product protein.
Length = 294
Score = 26.2 bits (55), Expect(2) = 3.7
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 705 GPPPPPPP 728
GPPPPPPP
Sbjct: 216 GPPPPPPP 223
Score = 24.6 bits (51), Expect(2) = 3.7
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +3
Query: 708 PPPPPPPXXXFXXXGGPP 761
PPPPPPP PP
Sbjct: 218 PPPPPPPPPHLLSCWLPP 235
>AC004999-1|AAC83178.1| 294|Homo sapiens survival motor neuron 1
protein protein.
Length = 294
Score = 26.2 bits (55), Expect(2) = 3.7
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 705 GPPPPPPP 728
GPPPPPPP
Sbjct: 216 GPPPPPPP 223
Score = 24.6 bits (51), Expect(2) = 3.7
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +3
Query: 708 PPPPPPPXXXFXXXGGPP 761
PPPPPPP PP
Sbjct: 218 PPPPPPPPPHLLSCWLPP 235
>BC070242-1|AAH70242.1| 282|Homo sapiens survival of motor neuron
2, centromeric protein.
Length = 282
Score = 26.2 bits (55), Expect(2) = 3.7
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 705 GPPPPPPP 728
GPPPPPPP
Sbjct: 216 GPPPPPPP 223
Score = 24.6 bits (51), Expect(2) = 3.7
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +3
Query: 708 PPPPPPPXXXFXXXGGPP 761
PPPPPPP PP
Sbjct: 218 PPPPPPPPPHLLSCWLPP 235
>BC000908-1|AAH00908.1| 282|Homo sapiens SMN1 protein protein.
Length = 282
Score = 26.2 bits (55), Expect(2) = 3.7
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 705 GPPPPPPP 728
GPPPPPPP
Sbjct: 216 GPPPPPPP 223
Score = 24.6 bits (51), Expect(2) = 3.7
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +3
Query: 708 PPPPPPPXXXFXXXGGPP 761
PPPPPPP PP
Sbjct: 218 PPPPPPPPPHLLSCWLPP 235
>AL591380-1|CAH71475.1| 817|Homo sapiens enabled homolog
(Drosophila) protein.
Length = 817
Score = 26.2 bits (55), Expect(2) = 4.4
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 705 GPPPPPPP 728
GPPPPPPP
Sbjct: 593 GPPPPPPP 600
Score = 24.2 bits (50), Expect(2) = 4.4
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +3
Query: 708 PPPPPPPXXXFXXXGGPP 761
PPPPPPP PP
Sbjct: 595 PPPPPPPPLPNQVPPPPP 612
>AL356216-2|CAI22020.1| 817|Homo sapiens enabled homolog
(Drosophila) protein.
Length = 817
Score = 26.2 bits (55), Expect(2) = 4.4
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 705 GPPPPPPP 728
GPPPPPPP
Sbjct: 593 GPPPPPPP 600
Score = 24.2 bits (50), Expect(2) = 4.4
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +3
Query: 708 PPPPPPPXXXFXXXGGPP 761
PPPPPPP PP
Sbjct: 595 PPPPPPPPLPNQVPPPPP 612
>AK127078-1|BAC86815.1| 844|Homo sapiens protein ( Homo sapiens
cDNA FLJ45135 fis, clone BRAWH3038252, highly similar
to Formin 1 isoform IV. ).
Length = 844
Score = 27.9 bits (59), Expect(2) = 5.7
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 708 PPPPPPPXXXFXXXGGPP 761
PPPPPPP GPP
Sbjct: 330 PPPPPPPPLPPPSSAGPP 347
Score = 26.2 bits (55), Expect(2) = 7.4
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 705 GPPPPPPP 728
GPPPPPPP
Sbjct: 345 GPPPPPPP 352
Score = 23.4 bits (48), Expect(2) = 7.4
Identities = 8/17 (47%), Positives = 8/17 (47%)
Frame = +3
Query: 711 PPPPPPXXXFXXXGGPP 761
PPPPPP PP
Sbjct: 346 PPPPPPPPPLPNSPAPP 362
Score = 22.2 bits (45), Expect(2) = 5.7
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3
Query: 705 GPPPPPPP 728
GPP PPPP
Sbjct: 325 GPPLPPPP 332
>D87459-1|BAA13399.2| 567|Homo sapiens KIAA0269 protein.
Length = 567
Score = 25.8 bits (54), Expect(2) = 5.8
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +3
Query: 708 PPPPPPPXXXFXXXGGPP 761
PPPPPPP PP
Sbjct: 361 PPPPPPPATALQAPAVPP 378
Score = 24.2 bits (50), Expect(2) = 5.8
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +3
Query: 693 FXXXGPPPPPPP 728
F PPPPPPP
Sbjct: 327 FVSPTPPPPPPP 338
>BC044591-1|AAH44591.1| 559|Homo sapiens WAS protein family, member
1 protein.
Length = 559
Score = 25.8 bits (54), Expect(2) = 5.9
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +3
Query: 708 PPPPPPPXXXFXXXGGPP 761
PPPPPPP PP
Sbjct: 353 PPPPPPPATALQAPAVPP 370
Score = 24.2 bits (50), Expect(2) = 5.9
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +3
Query: 693 FXXXGPPPPPPP 728
F PPPPPPP
Sbjct: 319 FVSPTPPPPPPP 330
>AL590009-1|CAI12485.1| 559|Homo sapiens WAS protein family, member
1 protein.
Length = 559
Score = 25.8 bits (54), Expect(2) = 5.9
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +3
Query: 708 PPPPPPPXXXFXXXGGPP 761
PPPPPPP PP
Sbjct: 353 PPPPPPPATALQAPAVPP 370
Score = 24.2 bits (50), Expect(2) = 5.9
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +3
Query: 693 FXXXGPPPPPPP 728
F PPPPPPP
Sbjct: 319 FVSPTPPPPPPP 330
>AF134303-1|AAD33052.1| 559|Homo sapiens Scar1 protein.
Length = 559
Score = 25.8 bits (54), Expect(2) = 5.9
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +3
Query: 708 PPPPPPPXXXFXXXGGPP 761
PPPPPPP PP
Sbjct: 353 PPPPPPPATALQAPAVPP 370
Score = 24.2 bits (50), Expect(2) = 5.9
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +3
Query: 693 FXXXGPPPPPPP 728
F PPPPPPP
Sbjct: 319 FVSPTPPPPPPP 330
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,994,360
Number of Sequences: 237096
Number of extensions: 1480480
Number of successful extensions: 31347
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 4178
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17486
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 16183591620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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