Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP17_F_A19
(1162 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase assoc... 29 0.046
AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase assoc... 29 0.049
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 27 0.10
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.51
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.51
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.51
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 26 1.9
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 26 2.0
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 26 2.0
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 30 3.6
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 25 5.9
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 24 6.6
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 24 6.7
>AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase associated
protein homologprotein 1, isoform a protein.
Length = 1256
Score = 28.7 bits (61), Expect(2) = 0.046
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 708 PPPPPPPXXXFXXXGGPP 761
PPPPPPP F PP
Sbjct: 1014 PPPPPPPADFFANIAPPP 1031
Score = 26.2 bits (55), Expect(2) = 0.046
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 705 GPPPPPPP 728
GPPPPPPP
Sbjct: 1011 GPPPPPPP 1018
>AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase
associated protein homologprotein 1, isoform b protein.
Length = 495
Score = 28.7 bits (61), Expect(2) = 0.049
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 708 PPPPPPPXXXFXXXGGPP 761
PPPPPPP F PP
Sbjct: 253 PPPPPPPADFFANIAPPP 270
Score = 26.2 bits (55), Expect(2) = 0.049
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 705 GPPPPPPP 728
GPPPPPPP
Sbjct: 250 GPPPPPPP 257
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 27.5 bits (58), Expect(2) = 0.10
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 708 PPPPPPPXXXFXXXGGPP 761
PPPPPPP F G P
Sbjct: 577 PPPPPPPPPSFMFNGKVP 594
Score = 26.2 bits (55), Expect(2) = 0.10
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 705 GPPPPPPP 728
GPPPPPPP
Sbjct: 575 GPPPPPPP 582
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 32.7 bits (71), Expect = 0.51
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +3
Query: 705 GPPPPPPPXXXFXXXGGPP 761
GPPPPPPP GGPP
Sbjct: 725 GPPPPPPPGGLPPITGGPP 743
Score = 32.7 bits (71), Expect = 0.51
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +3
Query: 705 GPPPPPPPXXXFXXXGGPP 761
GPPPPPPP GGPP
Sbjct: 741 GPPPPPPPGGLPPISGGPP 759
Score = 29.9 bits (64), Expect = 3.6
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = +3
Query: 708 PPPPPPPXXXFXXXGGPP 761
PPPPPPP F GGPP
Sbjct: 770 PPPPPPPPGGF--KGGPP 785
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 32.7 bits (71), Expect = 0.51
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +3
Query: 705 GPPPPPPPXXXFXXXGGPP 761
GPPPPPPP GGPP
Sbjct: 725 GPPPPPPPGGLPPITGGPP 743
Score = 32.7 bits (71), Expect = 0.51
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +3
Query: 705 GPPPPPPPXXXFXXXGGPP 761
GPPPPPPP GGPP
Sbjct: 741 GPPPPPPPGGLPPISGGPP 759
Score = 29.9 bits (64), Expect = 3.6
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = +3
Query: 708 PPPPPPPXXXFXXXGGPP 761
PPPPPPP F GGPP
Sbjct: 770 PPPPPPPPGGF--KGGPP 785
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 32.7 bits (71), Expect = 0.51
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +3
Query: 705 GPPPPPPPXXXFXXXGGPP 761
GPPPPPPP GGPP
Sbjct: 308 GPPPPPPPGGLPPITGGPP 326
Score = 32.7 bits (71), Expect = 0.51
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +3
Query: 705 GPPPPPPPXXXFXXXGGPP 761
GPPPPPPP GGPP
Sbjct: 324 GPPPPPPPGGLPPISGGPP 342
Score = 29.9 bits (64), Expect = 3.6
Identities = 12/18 (66%), Positives = 12/18 (66%)
Frame = +3
Query: 708 PPPPPPPXXXFXXXGGPP 761
PPPPPPP F GGPP
Sbjct: 353 PPPPPPPPGGF--KGGPP 368
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 26.2 bits (55), Expect(2) = 1.9
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +3
Query: 708 PPPPPPPXXXFXXXGGPP 761
PPPPPPP G P
Sbjct: 249 PPPPPPPPAQLMASSGTP 266
Score = 23.0 bits (47), Expect(2) = 1.9
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3
Query: 705 GPPPPPPP 728
G PPPPPP
Sbjct: 245 GAPPPPPP 252
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 26.2 bits (55), Expect(2) = 2.0
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +3
Query: 708 PPPPPPPXXXFXXXGGPP 761
PPPPPPP G P
Sbjct: 235 PPPPPPPPAQLMASSGTP 252
Score = 23.0 bits (47), Expect(2) = 2.0
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3
Query: 705 GPPPPPPP 728
G PPPPPP
Sbjct: 231 GAPPPPPP 238
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 26.2 bits (55), Expect(2) = 2.0
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +3
Query: 708 PPPPPPPXXXFXXXGGPP 761
PPPPPPP G P
Sbjct: 235 PPPPPPPPAQLMASSGTP 252
Score = 23.0 bits (47), Expect(2) = 2.0
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3
Query: 705 GPPPPPPP 728
G PPPPPP
Sbjct: 231 GAPPPPPP 238
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 29.9 bits (64), Expect = 3.6
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +2
Query: 680 GGGXXXXGWAPPPPPP 727
GGG G APPPPPP
Sbjct: 44 GGGGCGGGCAPPPPPP 59
Score = 29.9 bits (64), Expect = 3.6
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +2
Query: 680 GGGXXXXGWAPPPPPP 727
GGG G APPPPPP
Sbjct: 101 GGGGCGGGCAPPPPPP 116
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 25.4 bits (53), Expect(2) = 5.9
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +3
Query: 708 PPPPPPPXXXFXXXGGPP 761
PPPPPPP PP
Sbjct: 63 PPPPPPPPPPMCPPPPPP 80
Score = 22.2 bits (45), Expect(2) = 5.9
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3
Query: 705 GPPPPPPP 728
GPPP PPP
Sbjct: 26 GPPPCPPP 33
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 23.8 bits (49), Expect(2) = 6.6
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3
Query: 708 PPPPPPP 728
PPPPPPP
Sbjct: 767 PPPPPPP 773
Score = 23.4 bits (48), Expect(2) = 6.6
Identities = 8/17 (47%), Positives = 8/17 (47%)
Frame = +3
Query: 711 PPPPPPXXXFXXXGGPP 761
PPPPPP PP
Sbjct: 794 PPPPPPLPPISSGAPPP 810
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 23.8 bits (49), Expect(2) = 6.7
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3
Query: 708 PPPPPPP 728
PPPPPPP
Sbjct: 767 PPPPPPP 773
Score = 23.4 bits (48), Expect(2) = 6.7
Identities = 8/17 (47%), Positives = 8/17 (47%)
Frame = +3
Query: 711 PPPPPPXXXFXXXGGPP 761
PPPPPP PP
Sbjct: 794 PPPPPPLPPISSGAPPP 810
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,911,270
Number of Sequences: 27780
Number of extensions: 178940
Number of successful extensions: 4501
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 608
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2537
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3161640774
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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