Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_A18
         (874 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0495 + 34323082-34323173,34323600-34323742,34324265-343243...    31   1.6  
12_02_0877 - 23946449-23948284                                         30   2.8  
08_02_1323 - 26136015-26137876,26138300-26139229,26139922-261400...    30   2.8  
03_02_0770 + 11038971-11039392,11040071-11040353,11040697-11040798     29   3.7  
01_05_0705 + 24424457-24424948,24425520-24425624,24426097-244262...    29   3.7  
11_01_0451 + 3499084-3501757,3501907-3502275,3502358-3502389           29   6.4  

>03_06_0495 +
           34323082-34323173,34323600-34323742,34324265-34324315,
           34324405-34324626,34324731-34324833,34325156-34325552,
           34326564-34326735,34326995-34327089,34327246-34327455
          Length = 494

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 14/42 (33%), Positives = 18/42 (42%)
 Frame = +1

Query: 655 GTGVLWNGYIVGITSHGDGCAKKYKPSVYTNVWYFXGLDRKT 780
           G G  WNG +    +HGDG AK    S     W+   +   T
Sbjct: 5   GGGPDWNGLLKWSLAHGDGTAKPRSLSEEDKKWFMEAMQANT 46


>12_02_0877 - 23946449-23948284
          Length = 611

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 22/59 (37%), Positives = 24/59 (40%), Gaps = 5/59 (8%)
 Frame = +1

Query: 550 YVPSRQCGRF-HNLSLTPDMFCLYGDGERDTCKGDSGT----GVLWNGYIVGITSHGDG 711
           YV  R  GR  H  +   DMFC  G   R     D+ T     V WN  I G   HG G
Sbjct: 344 YVRKRNLGRSTHVCNALIDMFCKCGCVNRADYVFDTETVQKDSVSWNSIIGGFAMHGHG 402


>08_02_1323 -
           26136015-26137876,26138300-26139229,26139922-26140068,
           26140139-26140360,26140513-26140555
          Length = 1067

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
 Frame = -3

Query: 659 VPESPLQVSLSPSPYKQNMSGVRLRL*-NLPHCRDGTYPRCVVSNPRCDIGPPYCVHPQ 486
           +P S      S +   +  SGV  RL  N+PH  DG +    VS+ +C +G   C+ P+
Sbjct: 167 IPPSGNDSKASGTENDEIQSGVVTRLTENVPHLEDGHHSESAVSSDQC-MGSTSCLVPE 224


>03_02_0770 + 11038971-11039392,11040071-11040353,11040697-11040798
          Length = 268

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 13/45 (28%), Positives = 22/45 (48%)
 Frame = +2

Query: 560 LGSVVDFTISASPQTCFVCMGMVKGIPVRVIQALEYFGMGTSWGL 694
           +G++  F ++A  +    C  +V G   + I     FG+  SWGL
Sbjct: 106 VGAIAGFAVTAGFEIALACDILVAGRSAKFIDTHAKFGIFPSWGL 150


>01_05_0705 +
           24424457-24424948,24425520-24425624,24426097-24426207,
           24426675-24426857,24427066-24427192,24427336-24427397,
           24427638-24427724,24428703-24428789,24429210-24429323,
           24429507-24429635,24429834-24429896,24430333-24430494,
           24430611-24430729,24430786-24431794
          Length = 949

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = -3

Query: 713 QPSPCEVIPTMYPFQSTPVPESPLQVSLSPS 621
           QP P   IP + P   +P P  P   SL+PS
Sbjct: 720 QPKPSSAIPQVTPATISPAPSLPSLQSLAPS 750


>11_01_0451 + 3499084-3501757,3501907-3502275,3502358-3502389
          Length = 1024

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +3

Query: 474 YCQWLGMDTVWRANITAWITDDTSGIRSISAVW 572
           Y Q L   T+   NI  W+ ++  GI +IS +W
Sbjct: 461 YLQVLEEFTISHNNINGWVPNEIFGIPTISLIW 493


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,525,297
Number of Sequences: 37544
Number of extensions: 509096
Number of successful extensions: 1358
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1287
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1358
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2456227356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)