Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP17_F_A18
(874 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like p... 56 3e-08
U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like p... 53 3e-07
U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like pr... 43 2e-04
AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like... 34 0.12
U39848-2|AAT81211.1| 279|Caenorhabditis elegans Hypothetical pr... 32 0.62
Z77666-12|CAJ43911.2| 896|Caenorhabditis elegans Hypothetical p... 29 4.3
Z82075-3|CAB04929.2| 784|Caenorhabditis elegans Hypothetical pr... 29 5.7
AF293972-1|AAG02478.1| 784|Caenorhabditis elegans auxilin protein. 29 5.7
>U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like
protease protein 1 protein.
Length = 293
Score = 56.4 bits (130), Expect = 3e-08
Identities = 45/157 (28%), Positives = 71/157 (45%), Gaps = 9/157 (5%)
Frame = +1
Query: 307 YNVSSLVVHKAYNTTAQFSNDIALIFLTSPVEFGKLVQKGILVDNGKWMSKYEKNF-IVS 483
+ V+++ +H YN S D A++ + PV + L + E +V+
Sbjct: 125 HRVTAVSIHPWYNIGFPSSYDFAIMRIHPPVNTSTTARPICLPS----LPAVENRLCVVT 180
Query: 484 GWGWTQYGGPISQRGLLTTHLGYVPSRQCGRFHNLS---LTPDMFCL-YGDGERDTCKGD 651
GWG T G +S L H+ + + C N P M C Y G+ D+C+GD
Sbjct: 181 GWGSTIEGSSLSAPTLREIHVPLLSTLFCSSLPNYIGRIHLPSMLCAGYSYGKIDSCQGD 240
Query: 652 SGTGVLW--NGY--IVGITSHGDGCAKKYKPSVYTNV 750
SG ++ +G+ + G+ S G GCA+ P VY NV
Sbjct: 241 SGGPLMCARDGHWELTGVVSWGIGCARPGMPGVYGNV 277
>U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like
protease protein 2 protein.
Length = 265
Score = 52.8 bits (121), Expect = 3e-07
Identities = 44/140 (31%), Positives = 71/140 (50%), Gaps = 9/140 (6%)
Frame = +1
Query: 358 FSNDIALIFLTSP-VEFGKLVQKGILVDNGKWMSKYEKNFIVSGWGWTQYGGPISQRGLL 534
FS+DIA++ + P +EF + Q I + + ++ + +VSGWG G ++R L
Sbjct: 114 FSHDIAILEIPYPGIEFNEYAQP-ICLPSKDFVYTPGRQCVVSGWG--SMGLRYAER-LQ 169
Query: 535 TTHLGYVPSRQCGRFHNL--SLTPDMFCL-YGDGERDTCKGDSGTGVLW---NGYIV--G 690
+ + C + S++ FC Y +G D+C+GDSG +G V G
Sbjct: 170 AALIPIINRFDCVNSSQIYSSMSRSAFCAGYLEGGIDSCQGDSGGPFACRREDGAFVLAG 229
Query: 691 ITSHGDGCAKKYKPSVYTNV 750
+ S GDGCA+K +P +YT V
Sbjct: 230 VISWGDGCAQKKQPGIYTMV 249
>U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like
protease protein 3 protein.
Length = 313
Score = 43.2 bits (97), Expect = 2e-04
Identities = 52/174 (29%), Positives = 82/174 (47%), Gaps = 22/174 (12%)
Frame = +1
Query: 295 KAKKYNVSSLVVHKAYNTTAQFSNDIALIFLTSPVEFGKLVQKGILVDNGKWMSKYEKNF 474
+ + ++V +H YN NDIAL+ ++S + + ++ D+ K + +Y KN
Sbjct: 101 RERSFSVKEAYIHSGYNNQTA-DNDIALLRISSDLSKLGIKPVCLVHDDSKLLKQY-KNG 158
Query: 475 IVSGWGWT----QYGGP--ISQRGLLTTHLGYVPSRQC---GRFHNL---SLTPDMFCLY 618
+V G+G T G P I+ + L +T + + C RF +L +T C
Sbjct: 159 VVIGYGLTLGEDSSGEPKLINSQTLQSTSVPIISDDDCVKTWRFLSLLSVKITGYQICA- 217
Query: 619 GDGERDTCKGDSGTGVL---WNG-YI-VGITSHG----DGCAKKYK-PSVYTNV 750
G T GDSG +L NG Y+ +GITS+G DG + K P VYT +
Sbjct: 218 GAYLHGTAPGDSGGPLLIHKSNGEYVQIGITSYGADGLDGVIDQGKFPGVYTRI 271
>AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like
protease protein 5 protein.
Length = 331
Score = 34.3 bits (75), Expect = 0.12
Identities = 35/152 (23%), Positives = 58/152 (38%), Gaps = 12/152 (7%)
Frame = +1
Query: 301 KKYNVSSLVVHKAYNTTAQFSNDIALIFLTSPVEFGKLVQKGILVDNGKWMSKYEKNFIV 480
K +S + Y T + NDI ++ L S ++ + L + + N
Sbjct: 155 KTLKISRFAIGDFYKTHCEQGNDIVILELESTIDDVEGANYACLPFLPEVNIQSGANVTS 214
Query: 481 SGWGWTQYGG------PISQRGLLTTHLGYVPSRQCGRFHNLSLTPDMFCLYGDGERDTC 642
GWG G P+ Q L T C S+ D FC + +++ C
Sbjct: 215 FGWGSDPGKGFDNAAFPMIQVLTLATET----LATCEENWGTSIPFDSFCTAEEEDKNVC 270
Query: 643 KGDSGTGVLWN------GYIVGITSHGDGCAK 720
GDSG G+ ++ +I+ I S+G C +
Sbjct: 271 SGDSGGGLTFHQSDSAREFIIAIVSYGSDCVQ 302
>U39848-2|AAT81211.1| 279|Caenorhabditis elegans Hypothetical
protein B0286.6 protein.
Length = 279
Score = 31.9 bits (69), Expect = 0.62
Identities = 37/152 (24%), Positives = 59/152 (38%), Gaps = 10/152 (6%)
Frame = +1
Query: 301 KKYNVSSLVVHKAYNTTA----QFSNDIALIFLTSPVEFGKLVQKGILVDNGKWMSKYEK 468
K + SL + K Y + NDIA+ L P+EF K + L K E
Sbjct: 96 KPLAIKSLYIRKGYVGDGCIDRESFNDIAVFELEEPIEFSKDIFPACLPSAPKIPRIRET 155
Query: 469 NFIVSGWGWTQYGGPISQRGLLTTHLGYVPSRQCGRFHNLSLTPDMFCLYGDGERDTCKG 648
+ + G+G + + G L + +V +C ++C +C G
Sbjct: 156 GYKLFGYG-RDPSDSVLESGKLKSLYSFV--AECSDDFPYG---GVYCTSAVNRGLSCDG 209
Query: 649 DSGTGVLWNG------YIVGITSHGDGCAKKY 726
DSG+GV+ +VG+ S G C + Y
Sbjct: 210 DSGSGVVRTSDTRNVQVLVGVLSAGMPCPELY 241
>Z77666-12|CAJ43911.2| 896|Caenorhabditis elegans Hypothetical
protein K08E7.5c protein.
Length = 896
Score = 29.1 bits (62), Expect = 4.3
Identities = 19/58 (32%), Positives = 24/58 (41%)
Frame = -3
Query: 689 PTMYPFQSTPVPESPLQVSLSPSPYKQNMSGVRLRL*NLPHCRDGTYPRCVVSNPRCD 516
PT P + V SP + PSPY +N+ P GT PR NP+ D
Sbjct: 124 PTTTPVEEEKVKVSPSSSTKEPSPYAENIMLT-------PKQAPGTEPRSNSQNPQTD 174
>Z82075-3|CAB04929.2| 784|Caenorhabditis elegans Hypothetical
protein W07A8.3 protein.
Length = 784
Score = 28.7 bits (61), Expect = 5.7
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = +1
Query: 292 FKAKKYNVSSLVVHKAYNTTAQFSNDIALIFLTSPVEFGKLVQKGILVDN 441
F KK +V ++ +NT S D ++IF +S ++ K++ + V +
Sbjct: 292 FLGKKSDVKHPILASKFNTQLLHSEDSSIIFTSSEMDVSKMIASAMPVQD 341
>AF293972-1|AAG02478.1| 784|Caenorhabditis elegans auxilin protein.
Length = 784
Score = 28.7 bits (61), Expect = 5.7
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = +1
Query: 292 FKAKKYNVSSLVVHKAYNTTAQFSNDIALIFLTSPVEFGKLVQKGILVDN 441
F KK +V ++ +NT S D ++IF +S ++ K++ + V +
Sbjct: 292 FLGKKSDVKHPILASKFNTQLLHSEDSSIIFTSSEMDVSKMIASAMPVQD 341
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,905,341
Number of Sequences: 27780
Number of extensions: 451851
Number of successful extensions: 1174
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1129
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1172
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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