Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_A18
         (874 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    53   4e-09
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    27   0.17 
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    27   0.17 
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    24   1.6  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    23   3.7  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    22   6.4  
M29494-1|AAA27729.1|   74|Apis mellifera protein ( Bee homeobox-...    22   8.5  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    22   8.5  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 52.8 bits (121), Expect = 4e-09
 Identities = 40/147 (27%), Positives = 66/147 (44%), Gaps = 9/147 (6%)
 Frame = +1

Query: 307 YNVSSLVVHKAYNTTAQFS---NDIALIFLTSPVEFGKLVQKGILVDNGKWMSKYEKNFI 477
           ++++ +++H  Y+   +     NDIAL+     ++FG  V    L       S    +  
Sbjct: 234 HSINKVIIHPKYDIIEKDDWQINDIALLKTEKDIKFGDKVGPACLPFQHFLDSFAGSDVT 293

Query: 478 VSGWGWTQYGGPISQRGLLTTHLGYVPSRQCGRFHNLSLTPDMFCLYGDGERDTCKGDSG 657
           V GWG T + G +S   L  T L  +   +C +++  ++  +  C Y  G +D C+ DSG
Sbjct: 294 VLGWGHTSFNGMLSHI-LQKTTLNMLTQVECYKYYG-NIMVNAMCAYAKG-KDACQMDSG 350

Query: 658 TGVLWNG------YIVGITSHGDGCAK 720
             VLW          +GI S G  C K
Sbjct: 351 GPVLWQNPRTKRLVNIGIISWGAECGK 377


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 27.5 bits (58), Expect = 0.17
 Identities = 15/60 (25%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = +2

Query: 563 GSVVDFTISASPQTCFVCMGMVKGIPVRVIQALEYFGMGTSWGLLHTATAARRN-ISRVF 739
           G  +   + A    C++   ++   P  V   L+ FG+G S+  ++ A   + N I+R+F
Sbjct: 550 GRELTIILLAGVLVCYLNTFLLLATPTTVTCILQRFGVGVSFSAVYGALLTKTNRIARIF 609


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 27.5 bits (58), Expect = 0.17
 Identities = 15/60 (25%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = +2

Query: 563 GSVVDFTISASPQTCFVCMGMVKGIPVRVIQALEYFGMGTSWGLLHTATAARRN-ISRVF 739
           G  +   + A    C++   ++   P  V   L+ FG+G S+  ++ A   + N I+R+F
Sbjct: 640 GRELTIILLAGVLVCYLNTFLLLATPTTVTCILQRFGVGVSFSAVYGALLTKTNRIARIF 699


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +1

Query: 652 SGTGVLWNGYIVGITSHGDGCAKKYKPSVYT 744
           +GT VL + +I G+       AKKY P  +T
Sbjct: 415 AGTVVLLHTWIAGLNEENFKDAKKYLPERWT 445


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -1

Query: 382 RSEQCRC*IELSCYTLC 332
           RSEQ  C  E  C+ LC
Sbjct: 731 RSEQFLCRYEAHCFALC 747


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -2

Query: 411 LPEFYGTSQEDQSNVVAELSCRVIRFVND 325
           LP F G+++  +   +  LS R+ + VND
Sbjct: 361 LPHFVGSNKPVKDEYMLVLSNRMQKIVND 389


>M29494-1|AAA27729.1|   74|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone H15. ).
          Length = 74

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +3

Query: 681 HRGDYFTRRRLREEI*AECLYQRLV 755
           H   Y TRRR  E   A CL +R +
Sbjct: 28  HYNHYLTRRRRIEIAHALCLTERQI 52


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -3

Query: 725 YFFAQPSPCEVIPTMYPFQSTPVPESPLQVSL 630
           YFF    PC +I +M     T  P+S  ++SL
Sbjct: 234 YFFNLIVPCVLIASMAVLGFTLPPDSGEKLSL 265


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 244,686
Number of Sequences: 438
Number of extensions: 5935
Number of successful extensions: 28
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28280841
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)