Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_A16
         (910 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_1136 + 34369994-34370312,34370398-34370550,34370648-343707...   271   6e-73
11_02_0124 + 8568012-8568392,8568532-8568798,8568963-8569364           30   2.2  
11_02_0131 + 8651175-8651313,8651567-8651743,8651761-8651879,865...    30   2.9  
03_02_0780 - 11131064-11131276,11131444-11131516,11134152-11134513     30   2.9  
01_06_1430 - 37309737-37309946,37310049-37310100,37310348-373104...    29   5.1  

>02_05_1136 +
           34369994-34370312,34370398-34370550,34370648-34370745,
           34371563-34371784
          Length = 263

 Score =  271 bits (664), Expect = 6e-73
 Identities = 118/190 (62%), Positives = 158/190 (83%)
 Frame = +1

Query: 205 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 384
           M E RL++ S+LKKVLEAI++L+T A FDC   G  LQAMD+SHV+LV+L LR++GF+ Y
Sbjct: 1   MLELRLVQGSLLKKVLEAIRELVTDANFDCSGTGFSLQAMDSSHVALVALLLRSEGFEHY 60

Query: 385 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 564
           RCDRN+SMGMNL +M+K+L+CAG+ D +TIKA D +D VTF+FESPNQ+K++D+EMKLM+
Sbjct: 61  RCDRNLSMGMNLNNMAKMLRCAGNDDIITIKADDGSDTVTFMFESPNQDKIADFEMKLMD 120

Query: 565 LDLEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSANV 744
           +D EHLGIP++EY   +RMPSSEF+RIC+DLS  G++++IS TKEGVKFS  GDIG+AN+
Sbjct: 121 IDSEHLGIPDSEYQAIVRMPSSEFSRICKDLSSIGDTVIISVTKEGVKFSTAGDIGTANI 180

Query: 745 KLAQTASIDK 774
              Q  ++DK
Sbjct: 181 VCRQNKTVDK 190



 Score = 31.1 bits (67), Expect = 1.3
 Identities = 14/35 (40%), Positives = 22/35 (62%)
 Frame = +2

Query: 794 LKWKSPSLXTFACQYLNYFPKXTXLSPQVXXSMSA 898
           ++ + P   TFA +Y+N F K + LS QV  S+S+
Sbjct: 197 IEMQEPVSLTFALRYMNSFTKASPLSEQVTISLSS 231


>11_02_0124 + 8568012-8568392,8568532-8568798,8568963-8569364
          Length = 349

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = +1

Query: 619 MPSSEFARICRDLSQFGESMVISCTKEGVK 708
           +PS++F  I + L QF +S+V  C + G+K
Sbjct: 61  LPSNDFNHIFKSLGQFEQSIVQDCARIGLK 90


>11_02_0131 +
           8651175-8651313,8651567-8651743,8651761-8651879,
           8652179-8652589
          Length = 281

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = +1

Query: 619 MPSSEFARICRDLSQFGESMVISCTKEGVK 708
           +PS++F +I R L QF +S +  CT  G++
Sbjct: 10  LPSNDFNQIFRSLEQFKQSTMQHCTHRGLQ 39


>03_02_0780 - 11131064-11131276,11131444-11131516,11134152-11134513
          Length = 215

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -2

Query: 792 DDCLLLFVNRSGLGQLDVR*ADVACCRELYSFFCA 688
           D C + + N + +GQ+D R  D +C R+L    CA
Sbjct: 123 DYCFMRYKNANFIGQVDTR-VDASCTRDLAPLACA 156


>01_06_1430 -
           37309737-37309946,37310049-37310100,37310348-37310427,
           37310538-37310606,37310710-37310843,37311173-37311332,
           37311483-37311554,37312113-37312246,37312386-37312521,
           37313273-37313416
          Length = 396

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = +1

Query: 424 SMSKILKCAGDK-DTVTIKAQDNADNVTFVFESPNQEKV 537
           S+ K+    G K + +++K Q  ADN+ F FE P ++ V
Sbjct: 238 SLEKVFSEVGSKSEMLSVKLQREADNLLFNFEEPLKDYV 276


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,238,129
Number of Sequences: 37544
Number of extensions: 415915
Number of successful extensions: 956
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 935
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 956
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2577242800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)