Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP17_F_A16
(910 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M15796-1|AAA35736.1| 261|Homo sapiens protein ( Human cyclin pr... 292 1e-78
J04718-1|AAA60040.1| 261|Homo sapiens PCNA protein. 292 1e-78
BC062439-1|AAH62439.1| 261|Homo sapiens proliferating cell nucl... 292 1e-78
BC000491-1|AAH00491.1| 261|Homo sapiens proliferating cell nucl... 292 1e-78
AL121924-4|CAC27344.1| 261|Homo sapiens proliferating cell nucl... 292 1e-78
AF527838-1|AAM78556.1| 261|Homo sapiens proliferating cell nucl... 292 1e-78
CR541799-1|CAG46598.1| 261|Homo sapiens PCNA protein. 290 4e-78
CR536501-1|CAG38740.1| 261|Homo sapiens PCNA protein. 289 1e-77
AY310163-1|AAP58730.1| 73|Homo sapiens proliferating cell nucl... 107 7e-23
AY310164-1|AAP58731.1| 73|Homo sapiens proliferating cell nucl... 106 1e-22
AY310162-1|AAP58729.1| 73|Homo sapiens proliferating cell nucl... 105 2e-22
>M15796-1|AAA35736.1| 261|Homo sapiens protein ( Human cyclin
protein gene, complete cds. ).
Length = 261
Score = 292 bits (716), Expect = 1e-78
Identities = 128/190 (67%), Positives = 168/190 (88%)
Frame = +1
Query: 205 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 384
MFEARL++ SILKKVLEA+KDL+ +A +D +G+ LQ+MD+SHVSLV LTLR++GFD Y
Sbjct: 1 MFEARLVQGSILKKVLEALKDLINEACWDISSSGVNLQSMDSSHVSLVQLTLRSEGFDTY 60
Query: 385 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 564
RCDRN++MG+NL SMSKILKCAG++D +T++A+DNAD + VFE+PNQEKVSDYEMKLM+
Sbjct: 61 RCDRNLAMGVNLTSMSKILKCAGNEDIITLRAEDNADTLALVFEAPNQEKVSDYEMKLMD 120
Query: 565 LDLEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSANV 744
LD+E LGIPE EYSC ++MPS EFARICRDLS G+++VISC K+GVKFSA+G++G+ N+
Sbjct: 121 LDVEQLGIPEQEYSCVVKMPSGEFARICRDLSHIGDAVVISCAKDGVKFSASGELGNGNI 180
Query: 745 KLAQTASIDK 774
KL+QT+++DK
Sbjct: 181 KLSQTSNVDK 190
Score = 37.5 bits (83), Expect = 0.067
Identities = 19/46 (41%), Positives = 25/46 (54%)
Frame = +2
Query: 773 KRRRQSSLKWKSPSLXTFACQYLNYFPKXTXLSPQVXXSMSANXXL 910
K +++ P TFA +YLN+F K T LS V SMSA+ L
Sbjct: 190 KEEEAVTIEMNEPVQLTFALRYLNFFTKATPLSSTVTLSMSADVPL 235
>J04718-1|AAA60040.1| 261|Homo sapiens PCNA protein.
Length = 261
Score = 292 bits (716), Expect = 1e-78
Identities = 128/190 (67%), Positives = 168/190 (88%)
Frame = +1
Query: 205 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 384
MFEARL++ SILKKVLEA+KDL+ +A +D +G+ LQ+MD+SHVSLV LTLR++GFD Y
Sbjct: 1 MFEARLVQGSILKKVLEALKDLINEACWDISSSGVNLQSMDSSHVSLVQLTLRSEGFDTY 60
Query: 385 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 564
RCDRN++MG+NL SMSKILKCAG++D +T++A+DNAD + VFE+PNQEKVSDYEMKLM+
Sbjct: 61 RCDRNLAMGVNLTSMSKILKCAGNEDIITLRAEDNADTLALVFEAPNQEKVSDYEMKLMD 120
Query: 565 LDLEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSANV 744
LD+E LGIPE EYSC ++MPS EFARICRDLS G+++VISC K+GVKFSA+G++G+ N+
Sbjct: 121 LDVEQLGIPEQEYSCVVKMPSGEFARICRDLSHIGDAVVISCAKDGVKFSASGELGNGNI 180
Query: 745 KLAQTASIDK 774
KL+QT+++DK
Sbjct: 181 KLSQTSNVDK 190
Score = 37.5 bits (83), Expect = 0.067
Identities = 19/46 (41%), Positives = 25/46 (54%)
Frame = +2
Query: 773 KRRRQSSLKWKSPSLXTFACQYLNYFPKXTXLSPQVXXSMSANXXL 910
K +++ P TFA +YLN+F K T LS V SMSA+ L
Sbjct: 190 KEEEAVTIEMNEPVQLTFALRYLNFFTKATPLSSTVTLSMSADVPL 235
>BC062439-1|AAH62439.1| 261|Homo sapiens proliferating cell nuclear
antigen protein.
Length = 261
Score = 292 bits (716), Expect = 1e-78
Identities = 128/190 (67%), Positives = 168/190 (88%)
Frame = +1
Query: 205 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 384
MFEARL++ SILKKVLEA+KDL+ +A +D +G+ LQ+MD+SHVSLV LTLR++GFD Y
Sbjct: 1 MFEARLVQGSILKKVLEALKDLINEACWDISSSGVNLQSMDSSHVSLVQLTLRSEGFDTY 60
Query: 385 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 564
RCDRN++MG+NL SMSKILKCAG++D +T++A+DNAD + VFE+PNQEKVSDYEMKLM+
Sbjct: 61 RCDRNLAMGVNLTSMSKILKCAGNEDIITLRAEDNADTLALVFEAPNQEKVSDYEMKLMD 120
Query: 565 LDLEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSANV 744
LD+E LGIPE EYSC ++MPS EFARICRDLS G+++VISC K+GVKFSA+G++G+ N+
Sbjct: 121 LDVEQLGIPEQEYSCVVKMPSGEFARICRDLSHIGDAVVISCAKDGVKFSASGELGNGNI 180
Query: 745 KLAQTASIDK 774
KL+QT+++DK
Sbjct: 181 KLSQTSNVDK 190
Score = 37.5 bits (83), Expect = 0.067
Identities = 19/46 (41%), Positives = 25/46 (54%)
Frame = +2
Query: 773 KRRRQSSLKWKSPSLXTFACQYLNYFPKXTXLSPQVXXSMSANXXL 910
K +++ P TFA +YLN+F K T LS V SMSA+ L
Sbjct: 190 KEEEAVTIEMNEPVQLTFALRYLNFFTKATPLSSTVTLSMSADVPL 235
>BC000491-1|AAH00491.1| 261|Homo sapiens proliferating cell nuclear
antigen protein.
Length = 261
Score = 292 bits (716), Expect = 1e-78
Identities = 128/190 (67%), Positives = 168/190 (88%)
Frame = +1
Query: 205 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 384
MFEARL++ SILKKVLEA+KDL+ +A +D +G+ LQ+MD+SHVSLV LTLR++GFD Y
Sbjct: 1 MFEARLVQGSILKKVLEALKDLINEACWDISSSGVNLQSMDSSHVSLVQLTLRSEGFDTY 60
Query: 385 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 564
RCDRN++MG+NL SMSKILKCAG++D +T++A+DNAD + VFE+PNQEKVSDYEMKLM+
Sbjct: 61 RCDRNLAMGVNLTSMSKILKCAGNEDIITLRAEDNADTLALVFEAPNQEKVSDYEMKLMD 120
Query: 565 LDLEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSANV 744
LD+E LGIPE EYSC ++MPS EFARICRDLS G+++VISC K+GVKFSA+G++G+ N+
Sbjct: 121 LDVEQLGIPEQEYSCVVKMPSGEFARICRDLSHIGDAVVISCAKDGVKFSASGELGNGNI 180
Query: 745 KLAQTASIDK 774
KL+QT+++DK
Sbjct: 181 KLSQTSNVDK 190
Score = 37.5 bits (83), Expect = 0.067
Identities = 19/46 (41%), Positives = 25/46 (54%)
Frame = +2
Query: 773 KRRRQSSLKWKSPSLXTFACQYLNYFPKXTXLSPQVXXSMSANXXL 910
K +++ P TFA +YLN+F K T LS V SMSA+ L
Sbjct: 190 KEEEAVTIEMNEPVQLTFALRYLNFFTKATPLSSTVTLSMSADVPL 235
>AL121924-4|CAC27344.1| 261|Homo sapiens proliferating cell nuclear
antigen protein.
Length = 261
Score = 292 bits (716), Expect = 1e-78
Identities = 128/190 (67%), Positives = 168/190 (88%)
Frame = +1
Query: 205 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 384
MFEARL++ SILKKVLEA+KDL+ +A +D +G+ LQ+MD+SHVSLV LTLR++GFD Y
Sbjct: 1 MFEARLVQGSILKKVLEALKDLINEACWDISSSGVNLQSMDSSHVSLVQLTLRSEGFDTY 60
Query: 385 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 564
RCDRN++MG+NL SMSKILKCAG++D +T++A+DNAD + VFE+PNQEKVSDYEMKLM+
Sbjct: 61 RCDRNLAMGVNLTSMSKILKCAGNEDIITLRAEDNADTLALVFEAPNQEKVSDYEMKLMD 120
Query: 565 LDLEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSANV 744
LD+E LGIPE EYSC ++MPS EFARICRDLS G+++VISC K+GVKFSA+G++G+ N+
Sbjct: 121 LDVEQLGIPEQEYSCVVKMPSGEFARICRDLSHIGDAVVISCAKDGVKFSASGELGNGNI 180
Query: 745 KLAQTASIDK 774
KL+QT+++DK
Sbjct: 181 KLSQTSNVDK 190
Score = 37.5 bits (83), Expect = 0.067
Identities = 19/46 (41%), Positives = 25/46 (54%)
Frame = +2
Query: 773 KRRRQSSLKWKSPSLXTFACQYLNYFPKXTXLSPQVXXSMSANXXL 910
K +++ P TFA +YLN+F K T LS V SMSA+ L
Sbjct: 190 KEEEAVTIEMNEPVQLTFALRYLNFFTKATPLSSTVTLSMSADVPL 235
>AF527838-1|AAM78556.1| 261|Homo sapiens proliferating cell nuclear
antigen protein.
Length = 261
Score = 292 bits (716), Expect = 1e-78
Identities = 128/190 (67%), Positives = 168/190 (88%)
Frame = +1
Query: 205 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 384
MFEARL++ SILKKVLEA+KDL+ +A +D +G+ LQ+MD+SHVSLV LTLR++GFD Y
Sbjct: 1 MFEARLVQGSILKKVLEALKDLINEACWDISSSGVNLQSMDSSHVSLVQLTLRSEGFDTY 60
Query: 385 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 564
RCDRN++MG+NL SMSKILKCAG++D +T++A+DNAD + VFE+PNQEKVSDYEMKLM+
Sbjct: 61 RCDRNLAMGVNLTSMSKILKCAGNEDIITLRAEDNADTLALVFEAPNQEKVSDYEMKLMD 120
Query: 565 LDLEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSANV 744
LD+E LGIPE EYSC ++MPS EFARICRDLS G+++VISC K+GVKFSA+G++G+ N+
Sbjct: 121 LDVEQLGIPEQEYSCVVKMPSGEFARICRDLSHIGDAVVISCAKDGVKFSASGELGNGNI 180
Query: 745 KLAQTASIDK 774
KL+QT+++DK
Sbjct: 181 KLSQTSNVDK 190
Score = 37.5 bits (83), Expect = 0.067
Identities = 19/46 (41%), Positives = 25/46 (54%)
Frame = +2
Query: 773 KRRRQSSLKWKSPSLXTFACQYLNYFPKXTXLSPQVXXSMSANXXL 910
K +++ P TFA +YLN+F K T LS V SMSA+ L
Sbjct: 190 KEEEAVTIEMNEPVQLTFALRYLNFFTKATPLSSTVTLSMSADVPL 235
>CR541799-1|CAG46598.1| 261|Homo sapiens PCNA protein.
Length = 261
Score = 290 bits (712), Expect = 4e-78
Identities = 127/190 (66%), Positives = 167/190 (87%)
Frame = +1
Query: 205 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 384
MFE RL++ SILKKVLEA+KDL+ +A +D +G+ LQ+MD+SHVSLV LTLR++GFD Y
Sbjct: 1 MFEGRLVQGSILKKVLEALKDLINEACWDISSSGVNLQSMDSSHVSLVQLTLRSEGFDTY 60
Query: 385 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 564
RCDRN++MG+NL SMSKILKCAG++D +T++A+DNAD + VFE+PNQEKVSDYEMKLM+
Sbjct: 61 RCDRNLAMGVNLTSMSKILKCAGNEDIITLRAEDNADTLALVFEAPNQEKVSDYEMKLMD 120
Query: 565 LDLEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSANV 744
LD+E LGIPE EYSC ++MPS EFARICRDLS G+++VISC K+GVKFSA+G++G+ N+
Sbjct: 121 LDVEQLGIPEQEYSCVVKMPSGEFARICRDLSHIGDAVVISCAKDGVKFSASGELGNGNI 180
Query: 745 KLAQTASIDK 774
KL+QT+++DK
Sbjct: 181 KLSQTSNVDK 190
Score = 37.5 bits (83), Expect = 0.067
Identities = 19/46 (41%), Positives = 25/46 (54%)
Frame = +2
Query: 773 KRRRQSSLKWKSPSLXTFACQYLNYFPKXTXLSPQVXXSMSANXXL 910
K +++ P TFA +YLN+F K T LS V SMSA+ L
Sbjct: 190 KEEEAVTIEMNEPVQLTFALRYLNFFTKATPLSSTVTLSMSADVPL 235
>CR536501-1|CAG38740.1| 261|Homo sapiens PCNA protein.
Length = 261
Score = 289 bits (708), Expect = 1e-77
Identities = 127/190 (66%), Positives = 167/190 (87%)
Frame = +1
Query: 205 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 384
MFEARL++ SILKKVLEA+KDL+ +A +D +G+ LQ+MD+SHVSLV LTLR++GFD Y
Sbjct: 1 MFEARLVQGSILKKVLEALKDLINEACWDISSSGVNLQSMDSSHVSLVQLTLRSEGFDTY 60
Query: 385 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 564
RCDRN++MG+NL SMSKILKCAG++D +T++A+DNAD + VFE+PNQEKVSDYEMKLM+
Sbjct: 61 RCDRNLAMGVNLTSMSKILKCAGNEDIITLRAEDNADTLALVFEAPNQEKVSDYEMKLMD 120
Query: 565 LDLEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSANV 744
LD+E LGIPE EYSC ++MPS EFA ICRDLS G+++VISC K+GVKFSA+G++G+ N+
Sbjct: 121 LDVEQLGIPEQEYSCVVKMPSGEFACICRDLSHIGDAVVISCAKDGVKFSASGELGNGNI 180
Query: 745 KLAQTASIDK 774
KL+QT+++DK
Sbjct: 181 KLSQTSNVDK 190
Score = 37.5 bits (83), Expect = 0.067
Identities = 19/46 (41%), Positives = 25/46 (54%)
Frame = +2
Query: 773 KRRRQSSLKWKSPSLXTFACQYLNYFPKXTXLSPQVXXSMSANXXL 910
K +++ P TFA +YLN+F K T LS V SMSA+ L
Sbjct: 190 KEEEAVTIEMNEPVQLTFALRYLNFFTKATPLSSTVTLSMSADVPL 235
>AY310163-1|AAP58730.1| 73|Homo sapiens proliferating cell nuclear
antigen protein.
Length = 73
Score = 107 bits (256), Expect = 7e-23
Identities = 48/72 (66%), Positives = 62/72 (86%)
Frame = +1
Query: 205 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 384
MFEARL++ SILKKVLEA+KDL+ +A +D +G+ LQ+MD+SHVSLV LTLR++GFD Y
Sbjct: 1 MFEARLVQGSILKKVLEALKDLINEACWDISSSGVNLQSMDSSHVSLVQLTLRSEGFDTY 60
Query: 385 RCDRNISMGMNL 420
RCDRN +MG+NL
Sbjct: 61 RCDRNPAMGVNL 72
>AY310164-1|AAP58731.1| 73|Homo sapiens proliferating cell nuclear
antigen protein.
Length = 73
Score = 106 bits (255), Expect = 1e-22
Identities = 47/72 (65%), Positives = 62/72 (86%)
Frame = +1
Query: 205 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 384
MFEARL++ SILKKVLEA+KD + +A +D +G+ LQ+MD+SHVSLV LTLR++GFD Y
Sbjct: 1 MFEARLVQGSILKKVLEALKDRINEACWDISSSGVNLQSMDSSHVSLVQLTLRSEGFDTY 60
Query: 385 RCDRNISMGMNL 420
RCDRN++MG+NL
Sbjct: 61 RCDRNLAMGVNL 72
>AY310162-1|AAP58729.1| 73|Homo sapiens proliferating cell nuclear
antigen protein.
Length = 73
Score = 105 bits (253), Expect = 2e-22
Identities = 47/72 (65%), Positives = 62/72 (86%)
Frame = +1
Query: 205 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 384
MFEARL++ SILKKVLEA+KDL+ +A +D +G+ LQ+MD+S VSLV LTLR++GFD Y
Sbjct: 1 MFEARLVQGSILKKVLEALKDLINEACWDISSSGVNLQSMDSSQVSLVQLTLRSEGFDTY 60
Query: 385 RCDRNISMGMNL 420
RCDRN++MG+NL
Sbjct: 61 RCDRNLAMGVNL 72
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,566,407
Number of Sequences: 237096
Number of extensions: 2369134
Number of successful extensions: 4926
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4731
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4926
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11770329464
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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