Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP17_F_A16
(910 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M33950-1|AAA28746.1| 260|Drosophila melanogaster protein ( D.me... 328 6e-90
AY122197-1|AAM52709.1| 260|Drosophila melanogaster LD45889p pro... 328 6e-90
AE013599-2982|AAS64796.1| 260|Drosophila melanogaster CG9193-PB... 328 6e-90
AE013599-2981|AAF57493.1| 260|Drosophila melanogaster CG9193-PA... 328 6e-90
AE014134-3147|AAF53835.1| 255|Drosophila melanogaster CG10262-P... 237 2e-62
AB195794-1|BAE94851.1| 255|Drosophila melanogaster proliferatin... 237 2e-62
BT021268-1|AAX33416.1| 216|Drosophila melanogaster RE50044p pro... 192 7e-49
AY167137-3|AAO17673.1| 36|Drosophila melanogaster PCNA protein. 59 1e-08
BT011030-1|AAR30190.1| 147|Drosophila melanogaster RE45652p pro... 33 0.71
AE014296-1917|AAS65040.1| 235|Drosophila melanogaster CG6216-PB... 33 0.71
AE014296-1916|AAF50087.2| 355|Drosophila melanogaster CG6216-PA... 33 0.71
AE014298-2710|AAS65404.1| 715|Drosophila melanogaster CG32549-P... 30 3.8
>M33950-1|AAA28746.1| 260|Drosophila melanogaster protein (
D.melanogaster proliferatingcell nuclear antigen (PCNA)
gene, complete cds. ).
Length = 260
Score = 328 bits (806), Expect = 6e-90
Identities = 150/190 (78%), Positives = 176/190 (92%)
Frame = +1
Query: 205 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 384
MFEARL +++ILKK+L+AIKDLL +ATFDC D+GIQLQAMDNSHVSLVSLTLR+DGFDK+
Sbjct: 1 MFEARLGQATILKKILDAIKDLLNEATFDCSDSGIQLQAMDNSHVSLVSLTLRSDGFDKF 60
Query: 385 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 564
RCDRN+SMGMNLGSM+KILKCA ++D VT+KAQDNAD VT +FES NQEKVSDYEMKLMN
Sbjct: 61 RCDRNLSMGMNLGSMAKILKCANNEDNVTMKAQDNADTVTIMFESANQEKVSDYEMKLMN 120
Query: 565 LDLEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSANV 744
LD EHLGIPET++SC +RMP+ EFARICRDL+QF ES+VI CTKEGVKFSA+GD+G+AN+
Sbjct: 121 LDQEHLGIPETDFSCVVRMPAMEFARICRDLAQFSESVVICCTKEGVKFSASGDVGTANI 180
Query: 745 KLAQTASIDK 774
KLAQT S+DK
Sbjct: 181 KLAQTGSVDK 190
Score = 39.5 bits (88), Expect = 0.006
Identities = 19/39 (48%), Positives = 24/39 (61%)
Frame = +2
Query: 794 LKWKSPSLXTFACQYLNYFPKXTXLSPQVXXSMSANXXL 910
++ + P TFAC+YLN F K T LS QV SM A+ L
Sbjct: 197 IEMQEPVTLTFACRYLNAFTKATPLSTQVQLSMCADVPL 235
>AY122197-1|AAM52709.1| 260|Drosophila melanogaster LD45889p
protein.
Length = 260
Score = 328 bits (806), Expect = 6e-90
Identities = 150/190 (78%), Positives = 176/190 (92%)
Frame = +1
Query: 205 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 384
MFEARL +++ILKK+L+AIKDLL +ATFDC D+GIQLQAMDNSHVSLVSLTLR+DGFDK+
Sbjct: 1 MFEARLGQATILKKILDAIKDLLNEATFDCSDSGIQLQAMDNSHVSLVSLTLRSDGFDKF 60
Query: 385 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 564
RCDRN+SMGMNLGSM+KILKCA ++D VT+KAQDNAD VT +FES NQEKVSDYEMKLMN
Sbjct: 61 RCDRNLSMGMNLGSMAKILKCANNEDNVTMKAQDNADTVTIMFESANQEKVSDYEMKLMN 120
Query: 565 LDLEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSANV 744
LD EHLGIPET++SC +RMP+ EFARICRDL+QF ES+VI CTKEGVKFSA+GD+G+AN+
Sbjct: 121 LDQEHLGIPETDFSCVVRMPAMEFARICRDLAQFSESVVICCTKEGVKFSASGDVGTANI 180
Query: 745 KLAQTASIDK 774
KLAQT S+DK
Sbjct: 181 KLAQTGSVDK 190
Score = 39.5 bits (88), Expect = 0.006
Identities = 19/39 (48%), Positives = 24/39 (61%)
Frame = +2
Query: 794 LKWKSPSLXTFACQYLNYFPKXTXLSPQVXXSMSANXXL 910
++ + P TFAC+YLN F K T LS QV SM A+ L
Sbjct: 197 IEMQEPVTLTFACRYLNAFTKATPLSTQVQLSMCADVPL 235
>AE013599-2982|AAS64796.1| 260|Drosophila melanogaster CG9193-PB,
isoform B protein.
Length = 260
Score = 328 bits (806), Expect = 6e-90
Identities = 150/190 (78%), Positives = 176/190 (92%)
Frame = +1
Query: 205 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 384
MFEARL +++ILKK+L+AIKDLL +ATFDC D+GIQLQAMDNSHVSLVSLTLR+DGFDK+
Sbjct: 1 MFEARLGQATILKKILDAIKDLLNEATFDCSDSGIQLQAMDNSHVSLVSLTLRSDGFDKF 60
Query: 385 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 564
RCDRN+SMGMNLGSM+KILKCA ++D VT+KAQDNAD VT +FES NQEKVSDYEMKLMN
Sbjct: 61 RCDRNLSMGMNLGSMAKILKCANNEDNVTMKAQDNADTVTIMFESANQEKVSDYEMKLMN 120
Query: 565 LDLEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSANV 744
LD EHLGIPET++SC +RMP+ EFARICRDL+QF ES+VI CTKEGVKFSA+GD+G+AN+
Sbjct: 121 LDQEHLGIPETDFSCVVRMPAMEFARICRDLAQFSESVVICCTKEGVKFSASGDVGTANI 180
Query: 745 KLAQTASIDK 774
KLAQT S+DK
Sbjct: 181 KLAQTGSVDK 190
Score = 39.5 bits (88), Expect = 0.006
Identities = 19/39 (48%), Positives = 24/39 (61%)
Frame = +2
Query: 794 LKWKSPSLXTFACQYLNYFPKXTXLSPQVXXSMSANXXL 910
++ + P TFAC+YLN F K T LS QV SM A+ L
Sbjct: 197 IEMQEPVTLTFACRYLNAFTKATPLSTQVQLSMCADVPL 235
>AE013599-2981|AAF57493.1| 260|Drosophila melanogaster CG9193-PA,
isoform A protein.
Length = 260
Score = 328 bits (806), Expect = 6e-90
Identities = 150/190 (78%), Positives = 176/190 (92%)
Frame = +1
Query: 205 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 384
MFEARL +++ILKK+L+AIKDLL +ATFDC D+GIQLQAMDNSHVSLVSLTLR+DGFDK+
Sbjct: 1 MFEARLGQATILKKILDAIKDLLNEATFDCSDSGIQLQAMDNSHVSLVSLTLRSDGFDKF 60
Query: 385 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 564
RCDRN+SMGMNLGSM+KILKCA ++D VT+KAQDNAD VT +FES NQEKVSDYEMKLMN
Sbjct: 61 RCDRNLSMGMNLGSMAKILKCANNEDNVTMKAQDNADTVTIMFESANQEKVSDYEMKLMN 120
Query: 565 LDLEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSANV 744
LD EHLGIPET++SC +RMP+ EFARICRDL+QF ES+VI CTKEGVKFSA+GD+G+AN+
Sbjct: 121 LDQEHLGIPETDFSCVVRMPAMEFARICRDLAQFSESVVICCTKEGVKFSASGDVGTANI 180
Query: 745 KLAQTASIDK 774
KLAQT S+DK
Sbjct: 181 KLAQTGSVDK 190
Score = 39.5 bits (88), Expect = 0.006
Identities = 19/39 (48%), Positives = 24/39 (61%)
Frame = +2
Query: 794 LKWKSPSLXTFACQYLNYFPKXTXLSPQVXXSMSANXXL 910
++ + P TFAC+YLN F K T LS QV SM A+ L
Sbjct: 197 IEMQEPVTLTFACRYLNAFTKATPLSTQVQLSMCADVPL 235
>AE014134-3147|AAF53835.1| 255|Drosophila melanogaster CG10262-PA
protein.
Length = 255
Score = 237 bits (580), Expect = 2e-62
Identities = 98/189 (51%), Positives = 151/189 (79%)
Frame = +1
Query: 205 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 384
M EARL ++ +LKK+++A+K+++ Q T DC +NG++LQ+MDNSHVSLV+L+L +D F+K+
Sbjct: 1 MLEARLSQTLLLKKIVDALKEIIAQGTLDCSENGLELQSMDNSHVSLVALSLASDCFEKF 60
Query: 385 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 564
CDRN+S+G++L S+ K+LKCA D VTIKA D + +T FES +E+ +DYE+KL+N
Sbjct: 61 HCDRNVSLGLDLKSLGKVLKCANSDDAVTIKAVDRPEKITLSFESDGKERTADYELKLLN 120
Query: 565 LDLEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSANV 744
LD +H+ IP+ +Y+C I++PSSEFARICRD+S F ES+ I+C+ +G++F A GD+G+AN+
Sbjct: 121 LDQDHMEIPKKDYTCFIQLPSSEFARICRDMSMFDESLTIACSSKGIRFLAKGDLGTANI 180
Query: 745 KLAQTASID 771
+L+ ++D
Sbjct: 181 QLSAGTAMD 189
>AB195794-1|BAE94851.1| 255|Drosophila melanogaster proliferating
cell nuclear antigen2 protein.
Length = 255
Score = 237 bits (580), Expect = 2e-62
Identities = 98/189 (51%), Positives = 151/189 (79%)
Frame = +1
Query: 205 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 384
M EARL ++ +LKK+++A+K+++ Q T DC +NG++LQ+MDNSHVSLV+L+L +D F+K+
Sbjct: 1 MLEARLSQTLLLKKIVDALKEIIAQGTLDCSENGLELQSMDNSHVSLVALSLASDCFEKF 60
Query: 385 RCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMN 564
CDRN+S+G++L S+ K+LKCA D VTIKA D + +T FES +E+ +DYE+KL+N
Sbjct: 61 HCDRNVSLGLDLKSLGKVLKCANSDDAVTIKAVDRPEKITLSFESDGKERTADYELKLLN 120
Query: 565 LDLEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSANV 744
LD +H+ IP+ +Y+C I++PSSEFARICRD+S F ES+ I+C+ +G++F A GD+G+AN+
Sbjct: 121 LDQDHMEIPKKDYTCFIQLPSSEFARICRDMSMFDESLTIACSSKGIRFLAKGDLGTANI 180
Query: 745 KLAQTASID 771
+L+ ++D
Sbjct: 181 QLSAGTAMD 189
>BT021268-1|AAX33416.1| 216|Drosophila melanogaster RE50044p
protein.
Length = 216
Score = 192 bits (467), Expect = 7e-49
Identities = 80/150 (53%), Positives = 119/150 (79%)
Frame = +1
Query: 322 MDNSHVSLVSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTIKAQDNADNV 501
MDNSHVSLV+L+L +D F+K+ CDRN+S+G++L S+ K+LKCA D VTIKA D + +
Sbjct: 1 MDNSHVSLVALSLASDCFEKFHCDRNVSLGLDLKSLGKVLKCANSDDAVTIKAVDRPEKI 60
Query: 502 TFVFESPNQEKVSDYEMKLMNLDLEHLGIPETEYSCTIRMPSSEFARICRDLSQFGESMV 681
T FES +E+ +DYE+KL+NLD +H+ IP+ +Y+C I++PSSEFARICRD+S F ES+
Sbjct: 61 TLSFESDGKERTADYELKLLNLDQDHMEIPKKDYTCFIQLPSSEFARICRDMSMFDESLT 120
Query: 682 ISCTKEGVKFSATGDIGSANVKLAQTASID 771
I+C+ +G++F A GD+G+AN++L+ ++D
Sbjct: 121 IACSSKGIRFLAKGDLGTANIQLSAGTAMD 150
>AY167137-3|AAO17673.1| 36|Drosophila melanogaster PCNA protein.
Length = 36
Score = 58.8 bits (136), Expect = 1e-08
Identities = 26/36 (72%), Positives = 33/36 (91%)
Frame = +1
Query: 205 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQ 312
MFEARL +++ILKK+L+AIKDLL +ATFDC D+GIQ
Sbjct: 1 MFEARLGQATILKKILDAIKDLLNEATFDCSDSGIQ 36
>BT011030-1|AAR30190.1| 147|Drosophila melanogaster RE45652p
protein.
Length = 147
Score = 32.7 bits (71), Expect = 0.71
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = +1
Query: 427 MSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQ-EKVSDYEMKLMNLDLEHLGIPETEY 603
MSK+ K TV + N+ V E EKV DY+M+ + + E + I E +Y
Sbjct: 1 MSKLDDLLSKKKTVVPVLDLSRSNIQTVEEFKRLLEKVPDYKMRPVKVRAEEIKIREKDY 60
Query: 604 SCTIRMPSSEFARICR 651
+ +MP E ++ R
Sbjct: 61 A--FKMPKKEMRKLLR 74
>AE014296-1917|AAS65040.1| 235|Drosophila melanogaster CG6216-PB,
isoform B protein.
Length = 235
Score = 32.7 bits (71), Expect = 0.71
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = +1
Query: 427 MSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQ-EKVSDYEMKLMNLDLEHLGIPETEY 603
MSK+ K TV + N+ V E EKV DY+M+ + + E + I E +Y
Sbjct: 1 MSKLDDLLSKKKTVVPVLDLSRSNIQTVEEFKRLLEKVPDYKMRPVKVRAEEIKIREKDY 60
Query: 604 SCTIRMPSSEFARICR 651
+ +MP E ++ R
Sbjct: 61 A--FKMPKKEMRKLLR 74
>AE014296-1916|AAF50087.2| 355|Drosophila melanogaster CG6216-PA,
isoform A protein.
Length = 355
Score = 32.7 bits (71), Expect = 0.71
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = +1
Query: 427 MSKILKCAGDKDTVTIKAQDNADNVTFVFESPNQ-EKVSDYEMKLMNLDLEHLGIPETEY 603
MSK+ K TV + N+ V E EKV DY+M+ + + E + I E +Y
Sbjct: 1 MSKLDDLLSKKKTVVPVLDLSRSNIQTVEEFKRLLEKVPDYKMRPVKVRAEEIKIREKDY 60
Query: 604 SCTIRMPSSEFARICR 651
+ +MP E ++ R
Sbjct: 61 A--FKMPKKEMRKLLR 74
>AE014298-2710|AAS65404.1| 715|Drosophila melanogaster CG32549-PA,
isoform A protein.
Length = 715
Score = 30.3 bits (65), Expect = 3.8
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = -3
Query: 701 PSFVHEITIDSPNCERSRQILANSELGMRIVQLYSVSGIP 582
PS ++ I I +PNC+RSR+ N L L + P
Sbjct: 69 PSRIYPIHIGAPNCQRSRRNKGNRRLSCSYASLGRMQATP 108
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,216,348
Number of Sequences: 53049
Number of extensions: 742697
Number of successful extensions: 1680
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1612
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1680
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4443987051
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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