Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP17_F_A15
(935 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 33 0.044
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 32 0.10
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 31 0.23
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 29 0.71
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 29 0.94
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 27 3.8
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 26 6.6
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 33.5 bits (73), Expect = 0.044
Identities = 20/60 (33%), Positives = 20/60 (33%), Gaps = 2/60 (3%)
Frame = -2
Query: 622 PXXXPXXKRXXPXXPPDXGXXPXPPPXG--GXTXPPPPXPGGXGXXGGEXXXXPKTXPPP 449
P P P P G P PPP G G PPPP P GG P P
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEP 801
Score = 32.3 bits (70), Expect = 0.10
Identities = 18/48 (37%), Positives = 18/48 (37%)
Frame = -2
Query: 589 PXXPPDXGXXPXPPPXGGXTXPPPPXPGGXGXXGGEXXXXPKTXPPPP 446
P P P P P G PPPP PG G P PPPP
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAG------AGPPPPPPPPP 783
Score = 29.5 bits (63), Expect = 0.71
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -3
Query: 933 PPPXGGGAPXPXXXKPXPRGXXXKXPPPPP 844
P P GG P P P P G PPPPP
Sbjct: 754 PAPIMGGPPPP----PPPPGVAGAGPPPPP 779
Score = 28.7 bits (61), Expect = 1.2
Identities = 17/51 (33%), Positives = 17/51 (33%), Gaps = 3/51 (5%)
Frame = -2
Query: 589 PXXPPDXGXXPXPPPXGGXTXPPPPXPGG---XGXXGGEXXXXPKTXPPPP 446
P PP P P P PP P GG G P PPPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 28.3 bits (60), Expect = 1.6
Identities = 19/56 (33%), Positives = 19/56 (33%)
Frame = -3
Query: 933 PPPXGGGAPXPXXXKPXPRGXXXKXPPPPPXGXXGXXGSPXPXXGGXRXGPPGGXP 766
PPP P P P P PPP P G P P G GPP P
Sbjct: 732 PPP-----PPPAVIVPTPAPAPIPVPPPAP--IMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 27.9 bits (59), Expect = 2.2
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -3
Query: 933 PPPXGGGAPXPXXXKPXPRGXXXKXPPPPP 844
PP G P P P G PPPPP
Sbjct: 753 PPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 27.9 bits (59), Expect = 2.2
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +3
Query: 486 PPXXPXPPGXGGGGXVXPP 542
PP P PPG G G PP
Sbjct: 761 PPPPPPPPGVAGAGPPPPP 779
Score = 27.1 bits (57), Expect = 3.8
Identities = 17/65 (26%), Positives = 18/65 (27%)
Frame = +1
Query: 478 PXPPPXXPXPRXWGGGXXXPPPRGGXXGXPPNRGXPXGKXFXPXGPXXGPKPXXGPGXXX 657
P PPP P PPP G PP P P P P G
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRY 792
Query: 658 FXXGP 672
+ P
Sbjct: 793 YAPAP 797
Score = 27.1 bits (57), Expect = 3.8
Identities = 17/58 (29%), Positives = 19/58 (32%), Gaps = 6/58 (10%)
Frame = +1
Query: 478 PXPPPXXPXPRXWGGGXXXPPPRGGXXGXPPNRGXP------XGKXFXPXGPXXGPKP 633
P P P P GG PPP G PP P G + P P+P
Sbjct: 746 PAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEPEP 803
Score = 26.6 bits (56), Expect = 5.0
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +1
Query: 760 PPGXPPRGXXPXPPPXGXRGTXXPXXP 840
PP G P PPP G G P P
Sbjct: 753 PPAPIMGGPPPPPPPPGVAGAGPPPPP 779
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 32.3 bits (70), Expect = 0.10
Identities = 27/109 (24%), Positives = 29/109 (26%)
Frame = +1
Query: 478 PXPPPXXPXPRXWGGGXXXPPPRGGXXGXPPNRGXPXGKXFXPXGPXXGPKPXXGPGXXX 657
P P P P+ G PPP P+ P G P P P
Sbjct: 1044 PIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAP- 1102
Query: 658 FXXGPPPXGGXXXXSPPXXGGGPPXGGXXXXXGXPPGXPPRGXXPXPPP 804
P P P G PP PP P G P P P
Sbjct: 1103 ----PVPKPSVAVPPVPAPSGAPPV--PKPSVAAPPVPVPSGAPPVPKP 1145
Score = 31.5 bits (68), Expect = 0.18
Identities = 31/115 (26%), Positives = 34/115 (29%), Gaps = 6/115 (5%)
Frame = +1
Query: 478 PXPPPXX---PXPRXWGGGXXXPPPRGGXXGXPPNRGXPXGKXFXPXGPXXGPKPXXGPG 648
P P P P P+ P P G P+ P P G PKP
Sbjct: 1093 PVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPV--PSGAPPVPKPSVAAP 1150
Query: 649 XXXFXXGPPPXGGXXXXSPPXXG---GGPPXGGXXXXXGXPPGXPPRGXXPXPPP 804
G PP +PP G PP G PP PP P P P
Sbjct: 1151 PVPAPSGAPPVPKPSVAAPPVPAPSSGIPPV--PKPAAGVPPVPPPSEAPPVPKP 1203
Score = 31.1 bits (67), Expect = 0.23
Identities = 28/110 (25%), Positives = 30/110 (27%), Gaps = 1/110 (0%)
Frame = +1
Query: 478 PXPPPXXPXPRXWGGGXXXPPPRGGXXGXPPNRGXPXGKXFXPXGPXXGPKPXXG-PGXX 654
P P P P+ P P G P+ P P G PKP P
Sbjct: 1115 PAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPA--PSGAPPVPKPSVAAPPVP 1172
Query: 655 XFXXGPPPXGGXXXXSPPXXGGGPPXGGXXXXXGXPPGXPPRGXXPXPPP 804
G PP PP G PP PP P P P
Sbjct: 1173 APSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTP 1222
Score = 30.3 bits (65), Expect = 0.41
Identities = 29/104 (27%), Positives = 30/104 (28%), Gaps = 8/104 (7%)
Frame = -2
Query: 733 PXGAPPXXXGGXFXXX-PXGGGAXGXKXXXRAXXRVWGPXXXPXXKRXX----PXXPPDX 569
P GAPP P GA A V P P + P P
Sbjct: 1117 PSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSS 1176
Query: 568 GXXPXPPPXGGXTXPPPP---XPGGXGXXGGEXXXXPKTXPPPP 446
G P P P G PPP P G P T PP P
Sbjct: 1177 GIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVP 1220
Score = 27.9 bits (59), Expect = 2.2
Identities = 32/144 (22%), Positives = 35/144 (24%), Gaps = 3/144 (2%)
Frame = -2
Query: 931 PPXGGGGXXPRXGETXPXGGXXKXPPPPPXGXKXGXGFPVXXXGGXQXGXPGGXSXGXTP 752
P G P+ P PP P P G P
Sbjct: 1086 PAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKP 1145
Query: 751 GXXXXP---PXGAPPXXXGGXFXXXPXGGGAXGXKXXXRAXXRVWGPXXXPXXKRXXPXX 581
P P GAPP P + G + G P P
Sbjct: 1146 SVAAPPVPAPSGAPPVPKPSV-AAPPVPAPSSGIPPVPKPAA---GVPPVPPPSEAPPVP 1201
Query: 580 PPDXGXXPXPPPXGGXTXPPPPXP 509
P G P PPP T PP P P
Sbjct: 1202 KPSVGVPPVPPP---STAPPVPTP 1222
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 31.1 bits (67), Expect = 0.23
Identities = 38/138 (27%), Positives = 40/138 (28%), Gaps = 7/138 (5%)
Frame = +1
Query: 487 PPXXPXPRXWGGGXXXPPPRGGX-XGXPPNRGXP-XGKXFXPXGPXXG-PKPXXGPGXXX 657
PP P PR G PP+G PP R P G+ P P P
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIP 396
Query: 658 FXXGP--PPXGGXXXXSPPXXGGGPPXGGXXXXXGXPPGXPPR--GXXPXPPPXGXRGTX 825
P PP G S P PP PP PP P PP
Sbjct: 397 GRSAPALPPLGNASRTSTPPV-PTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPI 455
Query: 826 XPXXPLXGGGGXFXXXPP 879
P PL G PP
Sbjct: 456 AP--PLPAGMPAAPPLPP 471
Score = 30.7 bits (66), Expect = 0.31
Identities = 30/145 (20%), Positives = 31/145 (21%), Gaps = 3/145 (2%)
Frame = -3
Query: 933 PPPXGGGAPXPXXXKPXPRGXXXKXPPPPPXGXXGXXGSPXPXXGGXRXGPPGGXPXGXP 754
PPP P P PPPPP P P P P P
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIP 396
Query: 753 XGXXXXXXXXXXXXXXXGXXXXPPXG---GGPXGKXPXTGPXXGFGAXXXXXGXKGFXPG 583
P P P P GA P
Sbjct: 397 GRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPP-LPPSAPI 455
Query: 582 XPPIXGXXXXPPPXGGXPXPPPPXP 508
PP+ PP PPP P
Sbjct: 456 APPLPAGMPAAPPLPPAAPAPPPAP 480
Score = 30.3 bits (65), Expect = 0.41
Identities = 26/122 (21%), Positives = 29/122 (23%)
Frame = -2
Query: 559 PXPPPXGGXTXPPPPXPGGXGXXGGEXXXXPKTXPPPPXGGXXXXTXKNXXXXXXXXEKK 380
P PPP G PP P T PP +
Sbjct: 255 PIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKRPPPP 314
Query: 379 XKPXXGGXXXXPXXKGAQKTQXPPNFPKKXXFXPPXXGGGAPXPQXXXXXGXPXPPPXRG 200
P P G+ + PP P PP P P PPP R
Sbjct: 315 PPPSRRNRGKPPIGNGSSNSSLPPPPP------PPRSNAAGSIPLPPQGRSAPPPPPPRS 368
Query: 199 EP 194
P
Sbjct: 369 AP 370
Score = 29.9 bits (64), Expect = 0.54
Identities = 18/56 (32%), Positives = 21/56 (37%), Gaps = 4/56 (7%)
Frame = -2
Query: 601 KRXXPXXPPDXGXXPXPPPXGGXTX---PPPPXPGGXGXXGG-EXXXXPKTXPPPP 446
KR P PP PP G + PPPP P G ++ PPPP
Sbjct: 309 KRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPP 364
Score = 28.3 bits (60), Expect = 1.6
Identities = 34/146 (23%), Positives = 36/146 (24%), Gaps = 2/146 (1%)
Frame = -3
Query: 933 PPPXGGGAPXPXXXKPXPRGXXXKX-PPPPPXGXXGXXGS-PXPXXGGXRXGPPGGXPXG 760
PPP + P G PPPPP GS P P G R PP P
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQG--RSAPPPPPPRS 368
Query: 759 XPXGXXXXXXXXXXXXXXXGXXXXPPXGGGPXGKXPXTGPXXGFGAXXXXXGXKGFXPGX 580
P P G P G + P
Sbjct: 369 APSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLG-NASRTSTPPVPTPPSLPPSA 427
Query: 579 PPIXGXXXXPPPXGGXPXPPPPXPGA 502
PP P G P PP P A
Sbjct: 428 PPSLPPSAPPSLPMGAPAAPPLPPSA 453
Score = 27.9 bits (59), Expect = 2.2
Identities = 15/56 (26%), Positives = 15/56 (26%)
Frame = +1
Query: 478 PXPPPXXPXPRXWGGGXXXPPPRGGXXGXPPNRGXPXGKXFXPXGPXXGPKPXXGP 645
P PP P G P P P G P P P P P P
Sbjct: 429 PSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAP 484
Score = 26.6 bits (56), Expect = 5.0
Identities = 27/108 (25%), Positives = 28/108 (25%), Gaps = 6/108 (5%)
Frame = +1
Query: 535 PPPRGGXXGXPPNR-GXPXGKXFXPXGPXXGPKPXXGPGXXXFXXGPPPXGGXXXXSPPX 711
PPP G PPN P KP P PP
Sbjct: 257 PPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKRPPPPPP 316
Query: 712 XG----GGPPXG-GXXXXXGXPPGXPPRGXXPXPPPXGXRGTXXPXXP 840
G PP G G PP PPR P +G P P
Sbjct: 317 PSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPP 364
Score = 25.8 bits (54), Expect = 8.8
Identities = 17/54 (31%), Positives = 18/54 (33%), Gaps = 4/54 (7%)
Frame = -2
Query: 865 KXPPPPPXGXKXGXGFPVXXXGGXQXG--XPGGXSXGXTPGXXXXPPXG--APP 716
K PPPPP + G P G P G PP G APP
Sbjct: 309 KRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPP 362
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 29.5 bits (63), Expect = 0.71
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -2
Query: 541 GGXTXPPPPXPGGXGXXGG 485
GG + PPP PGG G GG
Sbjct: 194 GGGSGGPPPGPGGFGGFGG 212
Score = 29.5 bits (63), Expect = 0.71
Identities = 20/63 (31%), Positives = 21/63 (33%)
Frame = +2
Query: 500 PAPGXGGGGXGXPPXGGGXWXXPXIGGXPGXXPFXPXXXXXAPNPXXGPVXGFXPXGPPP 679
P PG GG G G GG PG P P G + GF GP
Sbjct: 202 PGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFG-GGPGG 260
Query: 680 XGG 688
GG
Sbjct: 261 FGG 263
Score = 28.7 bits (61), Expect = 1.2
Identities = 24/74 (32%), Positives = 24/74 (32%), Gaps = 2/74 (2%)
Frame = -2
Query: 877 GGXXKXPPPPPXGXKXGXGFPVXXXGGXQXGXPGGXSXGXTPGXXXXPP--XGAPPXXXG 704
GG PPP P G GF G G GG G PG P G P G
Sbjct: 194 GGGSGGPPPGPGGF---GGFGGFGGEGHHHGGHGGFGGG--PGGFEGGPGGFGGGPGGFG 248
Query: 703 GXFXXXPXGGGAXG 662
G G G G
Sbjct: 249 GGLGGFGGGPGGFG 262
Score = 26.6 bits (56), Expect = 5.0
Identities = 19/60 (31%), Positives = 19/60 (31%)
Frame = +3
Query: 447 GGGGXVLGXXXXSPPXXPXPPGXGGGGXVXPPXGGGXGXSPXSGGXXGXXLXXXGXXXGP 626
GGG G PP P P G GG G G GG G G GP
Sbjct: 187 GGGFGGFGGGSGGPP--PGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGP 244
Score = 26.6 bits (56), Expect = 5.0
Identities = 20/60 (33%), Positives = 20/60 (33%)
Frame = +2
Query: 509 GXGGGGXGXPPXGGGXWXXPXIGGXPGXXPFXPXXXXXAPNPXXGPVXGFXPXGPPPXGG 688
G GGG G PP GG GG G P G GF GP GG
Sbjct: 192 GFGGGSGGPPPGPGGFGGFGGFGG-EGHHHGGHGGFGGGPGGFEGGPGGFG-GGPGGFGG 249
Score = 25.8 bits (54), Expect = 8.8
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +3
Query: 510 GXGGGGXVXPPXGGGXGXSPXSGGXXGXXLXXXGXXXGP 626
G G GG P G G G GG G G GP
Sbjct: 227 GGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGP 265
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 29.1 bits (62), Expect = 0.94
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -3
Query: 933 PPPXGGGAPXPXXXKPXPRGXXXKXPPPPP 844
PPP P P P P G PPP P
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 26.6 bits (56), Expect = 5.0
Identities = 13/32 (40%), Positives = 14/32 (43%), Gaps = 5/32 (15%)
Frame = -2
Query: 589 PXXPPDXGXXPXPP-----PXGGXTXPPPPXP 509
P PP P PP P G + PPPP P
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 27.1 bits (57), Expect = 3.8
Identities = 12/27 (44%), Positives = 13/27 (48%), Gaps = 2/27 (7%)
Frame = -2
Query: 577 PDXGXXPXPPPXG--GXTXPPPPXPGG 503
P P PPP G + PPPP P G
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPPG 31
Score = 26.2 bits (55), Expect = 6.6
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -3
Query: 588 PGXPPIXGXXXXPPPXGGXPXPPPPXPGAG 499
PG PP PPP P PPP P G
Sbjct: 6 PGNPP----PPPPPPGFEPPSQPPPPPPPG 31
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 26.2 bits (55), Expect = 6.6
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -3
Query: 822 GSPXPXXGGXRXGPPGGXPXGXPXG 748
G+P GG G PGG P G G
Sbjct: 613 GAPGGAPGGMPGGAPGGAPGGADNG 637
Score = 25.8 bits (54), Expect = 8.8
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -3
Query: 801 GGXRXGPPGGXPXGXPXG 748
GG G PGG P G P G
Sbjct: 612 GGAPGGAPGGMPGGAPGG 629
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,597,955
Number of Sequences: 5004
Number of extensions: 52431
Number of successful extensions: 343
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 208
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 475330268
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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