Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_A14
         (1103 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0686 - 30900748-30902167,30903442-30904742                       24   4.2  
01_01_0892 + 7037384-7037795,7038447-7038962,7039507-7039593,703...    24   5.7  
11_01_0133 + 1121392-1122731,1123417-1123858                           29   8.7  
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    29   8.7  
03_05_1153 + 30787574-30787608,30787982-30788089,30788651-307886...    29   8.7  
01_06_0172 + 27214051-27214596                                         29   8.7  

>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 24.2 bits (50), Expect(2) = 4.2
 Identities = 11/35 (31%), Positives = 11/35 (31%)
 Frame = +2

Query: 974  PPPPPPXXXXXXXXXKKKQXPPXXXXXXXXPXXXP 1078
            PPPPPP         K    PP        P   P
Sbjct: 336  PPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPP 370



 Score = 23.8 bits (49), Expect(2) = 4.2
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +2

Query: 971 PPPPPPP 991
           PPPPPPP
Sbjct: 313 PPPPPPP 319


>01_01_0892 +
           7037384-7037795,7038447-7038962,7039507-7039593,
           7039698-7039768,7040148-7040224,7040380-7040527,
           7040973-7041134,7041374-7041694
          Length = 597

 Score = 23.8 bits (49), Expect(2) = 5.7
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = +2

Query: 938 KKKXXXXXXXXPPPPPP 988
           KKK        PPPPPP
Sbjct: 101 KKKKRHHHHHPPPPPPP 117



 Score = 23.8 bits (49), Expect(2) = 5.7
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +2

Query: 971 PPPPPPP 991
           PPPPPPP
Sbjct: 126 PPPPPPP 132


>11_01_0133 + 1121392-1122731,1123417-1123858
          Length = 593

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 12/35 (34%), Positives = 13/35 (37%)
 Frame = +1

Query: 970  PSPPXPPPXXXXXXXXKKKTXPPPXXXXXXXXPXP 1074
            P+PP PPP           T PPP        P P
Sbjct: 132  PAPPPPPPPSHPALLPPDATAPPPPPTSVAALPPP 166


>10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,
            1211452-1211878,1212091-1213219,1213623-1213746,
            1214207-1214278,1215480-1215578,1215617-1215640,
            1215704-1215745,1215815-1215895,1215983-1216114,
            1216115-1216196,1216271-1216365,1218499-1218570,
            1218676-1218792,1219379-1219447,1219521-1219587,
            1219886-1220025
          Length = 1269

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 12/39 (30%), Positives = 13/39 (33%)
 Frame = +1

Query: 970  PSPPXPPPXXXXXXXXKKKTXPPPXXXXXXXXPXPXXXP 1086
            P+PP PPP             PPP        P P   P
Sbjct: 730  PAPPLPPPLPAAANKRNPPAPPPPPLMTGKKAPAPPPPP 768


>03_05_1153 + 30787574-30787608,30787982-30788089,30788651-30788689,
            30789181-30789184,30789496-30789580,30789609-30790321
          Length = 327

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 12/36 (33%), Positives = 14/36 (38%)
 Frame = +2

Query: 971  PPPPPPPXXXXXXXXXKKKQXPPXXXXXXXXPXXXP 1078
            PPPPPPP         KK++  P        P   P
Sbjct: 171  PPPPPPPAPEPEPEPPKKEEPQPPPPKEEEKPEPPP 206


>01_06_0172 + 27214051-27214596
          Length = 181

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 19/84 (22%), Positives = 28/84 (33%)
 Frame = -3

Query: 990 GGGGGGGXXKXXXXXFFXXKKKKKKXXPXGGXEEKKXXKGGGGXXXXXXGXXGGRXKKKK 811
           GGGGGGG  K          +++    P G   E       G          GG  ++  
Sbjct: 38  GGGGGGGWVKRMMTTTTAVPRRRGHYTPVGVEVELHGSAAAGADEEKPPRRRGGWLRRMM 97

Query: 810 XXXXXFXXKKXFFFFXXXXGGGGG 739
                   ++  ++     GGGGG
Sbjct: 98  VPRECVHGRQQRWWKLQAGGGGGG 121


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,633,048
Number of Sequences: 37544
Number of extensions: 329252
Number of successful extensions: 10715
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2635
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8360
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3316323664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)