Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_A13
         (907 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC032431-1|AAH32431.1|  107|Homo sapiens LOC389203 protein protein.    54   5e-07
BC006003-1|AAH06003.1|   89|Homo sapiens LOC389203 protein protein.    54   5e-07

>BC032431-1|AAH32431.1|  107|Homo sapiens LOC389203 protein protein.
          Length = 107

 Score = 54.4 bits (125), Expect = 5e-07
 Identities = 24/45 (53%), Positives = 30/45 (66%)
 Frame = +3

Query: 228 YPIAISPMIDVSEYKQIQKEARKNIRQEDIQPGNMKVWSDPFERK 362
           YPI   P++ + EYK+ Q   R  I QED+QP  +KVWSDPF RK
Sbjct: 63  YPIYFRPLMRLEEYKKEQAINRAGIVQEDVQPPGLKVWSDPFGRK 107


>BC006003-1|AAH06003.1|   89|Homo sapiens LOC389203 protein protein.
          Length = 89

 Score = 54.4 bits (125), Expect = 5e-07
 Identities = 24/45 (53%), Positives = 30/45 (66%)
 Frame = +3

Query: 228 YPIAISPMIDVSEYKQIQKEARKNIRQEDIQPGNMKVWSDPFERK 362
           YPI   P++ + EYK+ Q   R  I QED+QP  +KVWSDPF RK
Sbjct: 45  YPIYFRPLMRLEEYKKEQAINRAGIVQEDVQPPGLKVWSDPFGRK 89


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,225,069
Number of Sequences: 237096
Number of extensions: 1030018
Number of successful extensions: 11162
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 6604
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10669
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11714809042
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)