Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP17_F_A10
(876 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical p... 37 0.016
U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical p... 37 0.016
U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical p... 37 0.016
U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical p... 37 0.016
AL021481-4|CAA16335.1| 1083|Caenorhabditis elegans Hypothetical ... 36 0.050
AC025723-8|AAK29942.1| 1273|Caenorhabditis elegans C.elegans hom... 34 0.15
AC025723-7|AAN84833.1| 619|Caenorhabditis elegans C.elegans hom... 34 0.15
AC025723-6|AAN84834.1| 621|Caenorhabditis elegans C.elegans hom... 34 0.15
Z71178-6|CAA94880.2| 1185|Caenorhabditis elegans Hypothetical pr... 33 0.35
Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical pr... 31 0.82
Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical pr... 31 0.82
Z50029-6|CAD57714.1| 1072|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z50029-5|CAC42384.1| 1096|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z50029-4|CAB63417.1| 1082|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z50029-3|CAB63416.1| 1087|Caenorhabditis elegans Hypothetical pr... 30 2.5
AF087131-1|AAD14593.1| 1087|Caenorhabditis elegans alternatively... 30 2.5
AL031629-1|CAA20974.1| 287|Caenorhabditis elegans Hypothetical ... 29 3.3
Z99710-6|CAB16869.1| 362|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical pr... 29 4.4
Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical pr... 29 4.4
X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy ch... 29 4.4
U41545-6|AAK39135.1| 1130|Caenorhabditis elegans Temporarily ass... 29 4.4
AF039716-9|AAB96734.2| 548|Caenorhabditis elegans Hypothetical ... 29 4.4
U23179-7|AAC46721.1| 782|Caenorhabditis elegans Hypothetical pr... 29 5.8
AL033514-18|CAA22085.1| 170|Caenorhabditis elegans Hypothetical... 29 5.8
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr... 28 7.6
Z69385-4|CAA93427.2| 1326|Caenorhabditis elegans Hypothetical pr... 28 7.6
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch... 28 7.6
U41007-19|AAA82274.1| 432|Caenorhabditis elegans Hypothetical p... 28 7.6
L46861-1|AAA74747.1| 2553|Caenorhabditis elegans talin protein. 28 7.6
AC025726-17|AAK73909.2| 2553|Caenorhabditis elegans Hypothetical... 28 7.6
>U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical
protein F35D11.11a protein.
Length = 1840
Score = 37.1 bits (82), Expect = 0.016
Identities = 19/71 (26%), Positives = 37/71 (52%)
Frame = +2
Query: 293 LESEIKDLKEKNNDLVQKVQYWKMTAAQRENEKLSLMKEINELRLKLSKLRSTGGLQAQN 472
L +++D EK+ DL K++ ++T ++E ++ K +NE R+KL + + L A
Sbjct: 915 LRRDLEDSHEKSRDLDDKLRKMELTDEEKEEDRKKEQKTLNEERMKLMEQKEEAMLVATK 974
Query: 473 LDTAIQAASEK 505
T I + +
Sbjct: 975 HATTIDQQTRR 985
>U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical
protein F35D11.11c protein.
Length = 1898
Score = 37.1 bits (82), Expect = 0.016
Identities = 19/71 (26%), Positives = 37/71 (52%)
Frame = +2
Query: 293 LESEIKDLKEKNNDLVQKVQYWKMTAAQRENEKLSLMKEINELRLKLSKLRSTGGLQAQN 472
L +++D EK+ DL K++ ++T ++E ++ K +NE R+KL + + L A
Sbjct: 915 LRRDLEDSHEKSRDLDDKLRKMELTDEEKEEDRKKEQKTLNEERMKLMEQKEEAMLVATK 974
Query: 473 LDTAIQAASEK 505
T I + +
Sbjct: 975 HATTIDQQTRR 985
>U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical
protein F35D11.11d protein.
Length = 1671
Score = 37.1 bits (82), Expect = 0.016
Identities = 19/71 (26%), Positives = 37/71 (52%)
Frame = +2
Query: 293 LESEIKDLKEKNNDLVQKVQYWKMTAAQRENEKLSLMKEINELRLKLSKLRSTGGLQAQN 472
L +++D EK+ DL K++ ++T ++E ++ K +NE R+KL + + L A
Sbjct: 675 LRRDLEDSHEKSRDLDDKLRKMELTDEEKEEDRKKEQKTLNEERMKLMEQKEEAMLVATK 734
Query: 473 LDTAIQAASEK 505
T I + +
Sbjct: 735 HATTIDQQTRR 745
>U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical
protein F35D11.11b protein.
Length = 1911
Score = 37.1 bits (82), Expect = 0.016
Identities = 19/71 (26%), Positives = 37/71 (52%)
Frame = +2
Query: 293 LESEIKDLKEKNNDLVQKVQYWKMTAAQRENEKLSLMKEINELRLKLSKLRSTGGLQAQN 472
L +++D EK+ DL K++ ++T ++E ++ K +NE R+KL + + L A
Sbjct: 915 LRRDLEDSHEKSRDLDDKLRKMELTDEEKEEDRKKEQKTLNEERMKLMEQKEEAMLVATK 974
Query: 473 LDTAIQAASEK 505
T I + +
Sbjct: 975 HATTIDQQTRR 985
>AL021481-4|CAA16335.1| 1083|Caenorhabditis elegans Hypothetical
protein Y43F4B.6 protein.
Length = 1083
Score = 35.5 bits (78), Expect = 0.050
Identities = 28/104 (26%), Positives = 48/104 (46%), Gaps = 2/104 (1%)
Frame = +2
Query: 290 NLESEIKDLKEKNNDLVQKVQYWKMTAAQRENEKLSLMKEINELRLKLSKLRSTGGLQAQ 469
+LE +I E + + + + QRE+EK L+ I+EL +++KLR G +
Sbjct: 496 DLEKQIAMKDENRQKALDEQRAFIEAMQQRESEKTQLVVRISELETEMNKLRQEG----K 551
Query: 470 NLDTAIQAASEK--ALAHLVRASGEIAHTIDLAKAYMRDRQELE 595
+ TA + A E+ L L R E ++ K R+ +E
Sbjct: 552 KVTTAAKLAEERRQKLKDLERQHAEDKKVLNDMKKLQETRRRME 595
>AC025723-8|AAK29942.1| 1273|Caenorhabditis elegans C.elegans
homeobox protein 44,isoform a protein.
Length = 1273
Score = 33.9 bits (74), Expect = 0.15
Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 2/102 (1%)
Frame = +2
Query: 311 DLKEKNNDLVQKVQYWKMTAAQRENEKLSLMKEINELRLKLSKLRSTGGLQAQ-NLDTAI 487
D+K V+++ WK+ + E + +L+ E+NEL+ +L ++ + L I
Sbjct: 299 DIKRHEASHVEELAKWKLAVSAVEKKNKTLIGELNELKNQLESRNDYEAIKNELRLLREI 358
Query: 488 Q-AASEKALAHLVRASGEIAHTIDLAKAYMRDRQELEASSPR 610
+ S +A A + GE T+D A R + E +S R
Sbjct: 359 EFGDSAEANAESIERLGETVETLDRLLAEKNRRLQNENASLR 400
>AC025723-7|AAN84833.1| 619|Caenorhabditis elegans C.elegans
homeobox protein 44,isoform b protein.
Length = 619
Score = 33.9 bits (74), Expect = 0.15
Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 2/102 (1%)
Frame = +2
Query: 311 DLKEKNNDLVQKVQYWKMTAAQRENEKLSLMKEINELRLKLSKLRSTGGLQAQ-NLDTAI 487
D+K V+++ WK+ + E + +L+ E+NEL+ +L ++ + L I
Sbjct: 299 DIKRHEASHVEELAKWKLAVSAVEKKNKTLIGELNELKNQLESRNDYEAIKNELRLLREI 358
Query: 488 Q-AASEKALAHLVRASGEIAHTIDLAKAYMRDRQELEASSPR 610
+ S +A A + GE T+D A R + E +S R
Sbjct: 359 EFGDSAEANAESIERLGETVETLDRLLAEKNRRLQNENASLR 400
>AC025723-6|AAN84834.1| 621|Caenorhabditis elegans C.elegans
homeobox protein 44,isoform c protein.
Length = 621
Score = 33.9 bits (74), Expect = 0.15
Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 2/102 (1%)
Frame = +2
Query: 311 DLKEKNNDLVQKVQYWKMTAAQRENEKLSLMKEINELRLKLSKLRSTGGLQAQ-NLDTAI 487
D+K V+++ WK+ + E + +L+ E+NEL+ +L ++ + L I
Sbjct: 299 DIKRHEASHVEELAKWKLAVSAVEKKNKTLIGELNELKNQLESRNDYEAIKNELRLLREI 358
Query: 488 Q-AASEKALAHLVRASGEIAHTIDLAKAYMRDRQELEASSPR 610
+ S +A A + GE T+D A R + E +S R
Sbjct: 359 EFGDSAEANAESIERLGETVETLDRLLAEKNRRLQNENASLR 400
>Z71178-6|CAA94880.2| 1185|Caenorhabditis elegans Hypothetical
protein B0024.8 protein.
Length = 1185
Score = 32.7 bits (71), Expect = 0.35
Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +2
Query: 359 KMTAAQRENEKLSLMKEINELRLKLSKLRS-TGGLQAQNLDTAIQAASEKALAHLVRASG 535
+M A + ++++ E LR +S++ T G AQNL++ I + EK A L+ SG
Sbjct: 737 RMVADNLKEVIIAILNECKNLRSSVSRVAIVTIGTVAQNLNSKIDSEMEKICAVLLSKSG 796
Query: 536 EIAH 547
++++
Sbjct: 797 DVSN 800
>Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical protein
F59A2.6 protein.
Length = 1133
Score = 31.5 bits (68), Expect = 0.82
Identities = 18/62 (29%), Positives = 28/62 (45%)
Frame = +2
Query: 296 ESEIKDLKEKNNDLVQKVQYWKMTAAQRENEKLSLMKEINELRLKLSKLRSTGGLQAQNL 475
ESEI++LK K + +W++ E E L I L ++ KL + +A
Sbjct: 882 ESEIEELKIKEISAEKDRSHWEVEKEMLEGEAKELTDRIEGLEAEVKKLTAANETKAVKA 941
Query: 476 DT 481
DT
Sbjct: 942 DT 943
>Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical protein
F59A2.6 protein.
Length = 1133
Score = 31.5 bits (68), Expect = 0.82
Identities = 18/62 (29%), Positives = 28/62 (45%)
Frame = +2
Query: 296 ESEIKDLKEKNNDLVQKVQYWKMTAAQRENEKLSLMKEINELRLKLSKLRSTGGLQAQNL 475
ESEI++LK K + +W++ E E L I L ++ KL + +A
Sbjct: 882 ESEIEELKIKEISAEKDRSHWEVEKEMLEGEAKELTDRIEGLEAEVKKLTAANETKAVKA 941
Query: 476 DT 481
DT
Sbjct: 942 DT 943
>Z50029-6|CAD57714.1| 1072|Caenorhabditis elegans Hypothetical
protein ZC504.4d protein.
Length = 1072
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = +3
Query: 576 EIDKSWKHHHHVGVQSVVLRVQIKLRGSTAYHQQ*WVVNQF 698
EI+ KH HH V + KL ST H Q W+V +F
Sbjct: 65 EINMLKKHSHHRNVATYYGAFIKKLPSSTGKHDQLWLVMEF 105
>Z50029-5|CAC42384.1| 1096|Caenorhabditis elegans Hypothetical
protein ZC504.4c protein.
Length = 1096
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = +3
Query: 576 EIDKSWKHHHHVGVQSVVLRVQIKLRGSTAYHQQ*WVVNQF 698
EI+ KH HH V + KL ST H Q W+V +F
Sbjct: 65 EINMLKKHSHHRNVATYYGAFIKKLPSSTGKHDQLWLVMEF 105
>Z50029-4|CAB63417.1| 1082|Caenorhabditis elegans Hypothetical
protein ZC504.4b protein.
Length = 1082
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = +3
Query: 576 EIDKSWKHHHHVGVQSVVLRVQIKLRGSTAYHQQ*WVVNQF 698
EI+ KH HH V + KL ST H Q W+V +F
Sbjct: 65 EINMLKKHSHHRNVATYYGAFIKKLPSSTGKHDQLWLVMEF 105
>Z50029-3|CAB63416.1| 1087|Caenorhabditis elegans Hypothetical
protein ZC504.4a protein.
Length = 1087
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = +3
Query: 576 EIDKSWKHHHHVGVQSVVLRVQIKLRGSTAYHQQ*WVVNQF 698
EI+ KH HH V + KL ST H Q W+V +F
Sbjct: 65 EINMLKKHSHHRNVATYYGAFIKKLPSSTGKHDQLWLVMEF 105
>AF087131-1|AAD14593.1| 1087|Caenorhabditis elegans alternatively
spliced serine/threonineprotein kinase MIG-15 protein.
Length = 1087
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = +3
Query: 576 EIDKSWKHHHHVGVQSVVLRVQIKLRGSTAYHQQ*WVVNQF 698
EI+ KH HH V + KL ST H Q W+V +F
Sbjct: 65 EINMLKKHSHHRNVATYYGAFIKKLPSSTGKHDQLWLVMEF 105
>AL031629-1|CAA20974.1| 287|Caenorhabditis elegans Hypothetical
protein Y106G6D.1 protein.
Length = 287
Score = 29.5 bits (63), Expect = 3.3
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Frame = +2
Query: 287 ANLESEIKDLKEKNNDLVQKVQYWKMTAAQREN---EKLSLMKEINELRLKLSKLRSTG 454
A L+SE + + ++L ++V + T + N EKLSL+K+INE+ + L + G
Sbjct: 23 AILKSETYNARIARDNLTKEVASLRKTMGVQSNDDAEKLSLIKKINEMEKESENLLTPG 81
>Z99710-6|CAB16869.1| 362|Caenorhabditis elegans Hypothetical
protein F08A8.6 protein.
Length = 362
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +2
Query: 509 LAHLVRASGEIAHTIDLAKAYMRDRQELEASSPRW 613
L+ ++R +G++ H +D A+ L SSPRW
Sbjct: 146 LSRMLRLTGDMMHQMDSLLAFQEKVYLLSNSSPRW 180
>Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical protein
T18D3.4 protein.
Length = 1947
Score = 29.1 bits (62), Expect = 4.4
Identities = 29/121 (23%), Positives = 52/121 (42%)
Frame = +2
Query: 293 LESEIKDLKEKNNDLVQKVQYWKMTAAQRENEKLSLMKEINELRLKLSKLRSTGGLQAQN 472
+ES +K+ +E NN+L + +Q +NE L +I E +LS G A +
Sbjct: 1718 VESSVKEHQEHNNELNSQNVALAAAKSQLDNEIALLNSDIAEAHTELSASEDRGRRAASD 1777
Query: 473 LDTAIQAASEKALAHLVRASGEIAHTIDLAKAYMRDRQELEASSPRWSAISGTPSTDKAE 652
A + A + L H S ++ ++ ++D QE ++ G + KAE
Sbjct: 1778 ---AAKLAED--LRHEQEQSQQLERFKKQLESAVKDLQERADAAEAAVMKGGAKAIQKAE 1832
Query: 653 R 655
+
Sbjct: 1833 Q 1833
>Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical protein
T18D3.4 protein.
Length = 1947
Score = 29.1 bits (62), Expect = 4.4
Identities = 29/121 (23%), Positives = 52/121 (42%)
Frame = +2
Query: 293 LESEIKDLKEKNNDLVQKVQYWKMTAAQRENEKLSLMKEINELRLKLSKLRSTGGLQAQN 472
+ES +K+ +E NN+L + +Q +NE L +I E +LS G A +
Sbjct: 1718 VESSVKEHQEHNNELNSQNVALAAAKSQLDNEIALLNSDIAEAHTELSASEDRGRRAASD 1777
Query: 473 LDTAIQAASEKALAHLVRASGEIAHTIDLAKAYMRDRQELEASSPRWSAISGTPSTDKAE 652
A + A + L H S ++ ++ ++D QE ++ G + KAE
Sbjct: 1778 ---AAKLAED--LRHEQEQSQQLERFKKQLESAVKDLQERADAAEAAVMKGGAKAIQKAE 1832
Query: 653 R 655
+
Sbjct: 1833 Q 1833
>X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy chain 2
protein.
Length = 1947
Score = 29.1 bits (62), Expect = 4.4
Identities = 29/121 (23%), Positives = 52/121 (42%)
Frame = +2
Query: 293 LESEIKDLKEKNNDLVQKVQYWKMTAAQRENEKLSLMKEINELRLKLSKLRSTGGLQAQN 472
+ES +K+ +E NN+L + +Q +NE L +I E +LS G A +
Sbjct: 1718 VESSVKEHQEHNNELNSQNVALAAAKSQLDNEIALLNSDIAEAHTELSASEDRGRRAASD 1777
Query: 473 LDTAIQAASEKALAHLVRASGEIAHTIDLAKAYMRDRQELEASSPRWSAISGTPSTDKAE 652
A + A + L H S ++ ++ ++D QE ++ G + KAE
Sbjct: 1778 ---AAKLAED--LRHEQEQSQQLERFKKQLESAVKDLQERADAAEAAVMKGGAKAIQKAE 1832
Query: 653 R 655
+
Sbjct: 1833 Q 1833
>U41545-6|AAK39135.1| 1130|Caenorhabditis elegans Temporarily assigned
gene nameprotein 278 protein.
Length = 1130
Score = 29.1 bits (62), Expect = 4.4
Identities = 27/101 (26%), Positives = 48/101 (47%), Gaps = 2/101 (1%)
Frame = +2
Query: 293 LESEIKDLKEKNNDLVQKVQYWKMTAAQRENEKLSLMKEINELR--LKLSKLRSTGGLQA 466
+ESE K L + +++Q ++ ++++NE L+ + INEL LK ++ TG
Sbjct: 794 VESETK-LASVTEEREKEIQSFQTQISEKDNEVLTKAERINELETCLKEREVELTG--MR 850
Query: 467 QNLDTAIQAASEKALAHLVRASGEIAHTIDLAKAYMRDRQE 589
LD Q +E+ +V I ID +A + + E
Sbjct: 851 TKLDDMTQQLNEETT--VVLFDNSIQEKIDEKEATINEMNE 889
>AF039716-9|AAB96734.2| 548|Caenorhabditis elegans Hypothetical
protein W03G9.7 protein.
Length = 548
Score = 29.1 bits (62), Expect = 4.4
Identities = 22/88 (25%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Frame = +2
Query: 308 KDLKEKNNDLVQKVQYWKMTAAQRENEKLSLMKEINELRLKLSKLRSTGGLQAQNLDTAI 487
KDL + NN+L++K + A RE E+L+LMK++ + +L + + L+ +
Sbjct: 374 KDLDQANNELIKKQK------ALRE-ERLTLMKKLAKAQLDIDMKIDYDDVADDELEREL 426
Query: 488 QAASEKALAHLVR-ASGEIAHTIDLAKA 568
+ +AL + + ++ +DL K+
Sbjct: 427 KELERQALRDVEKLKEADVQGILDLGKS 454
>U23179-7|AAC46721.1| 782|Caenorhabditis elegans Hypothetical
protein C27D6.1 protein.
Length = 782
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/49 (22%), Positives = 31/49 (63%)
Frame = +2
Query: 305 IKDLKEKNNDLVQKVQYWKMTAAQRENEKLSLMKEINELRLKLSKLRST 451
+ +L+ + + VQ + W++ + + E + L++E+NE++ KL ++ ++
Sbjct: 270 LPELELELAETVQAKEEWQVKSQEMEIQNKQLVEELNEVQKKLEEIENS 318
>AL033514-18|CAA22085.1| 170|Caenorhabditis elegans Hypothetical
protein Y75B8A.18 protein.
Length = 170
Score = 28.7 bits (61), Expect = 5.8
Identities = 17/66 (25%), Positives = 34/66 (51%)
Frame = +2
Query: 281 SMANLESEIKDLKEKNNDLVQKVQYWKMTAAQRENEKLSLMKEINELRLKLSKLRSTGGL 460
+M +E K + N ++ YW+ A R+NE + +K +NE ++++ K R + L
Sbjct: 76 NMTTQTAEESITKYRKNTENPEMSYWESIVANRQNE-VDRIKALNE-KMEVEKSRKSEML 133
Query: 461 QAQNLD 478
A+ +
Sbjct: 134 DAKQTE 139
>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical protein
K12F2.1 protein.
Length = 1969
Score = 28.3 bits (60), Expect = 7.6
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +2
Query: 290 NLESEIKDLKEKNNDLVQKVQYWKMTAAQRENEKLSLMKEINELRLKLSKLRSTG 454
N E+E +L+E+NNDL V + E E L+ E+ E+ +L G
Sbjct: 1714 NAEAECIELREQNNDLNAHVSALTGQRRKLEGELLAAHAELEEIANELKNAVEQG 1768
>Z69385-4|CAA93427.2| 1326|Caenorhabditis elegans Hypothetical
protein ZK593.5 protein.
Length = 1326
Score = 28.3 bits (60), Expect = 7.6
Identities = 14/51 (27%), Positives = 27/51 (52%)
Frame = +2
Query: 290 NLESEIKDLKEKNNDLVQKVQYWKMTAAQRENEKLSLMKEINELRLKLSKL 442
N+E I L+E D+ + + A ++ + LMKEI +L++ + +L
Sbjct: 527 NMEERIMQLEETIEDMEEARDLDEQLAEVQKQQVKDLMKEIEQLKIHIHEL 577
>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain 3
protein.
Length = 1969
Score = 28.3 bits (60), Expect = 7.6
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +2
Query: 290 NLESEIKDLKEKNNDLVQKVQYWKMTAAQRENEKLSLMKEINELRLKLSKLRSTG 454
N E+E +L+E+NNDL V + E E L+ E+ E+ +L G
Sbjct: 1714 NAEAECIELREQNNDLNAHVSALTGQRRKLEGELLAAHAELEEIANELKNAVEQG 1768
>U41007-19|AAA82274.1| 432|Caenorhabditis elegans Hypothetical
protein C33H5.17 protein.
Length = 432
Score = 28.3 bits (60), Expect = 7.6
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Frame = +2
Query: 290 NLESEIKDLKEKNNDL---VQKVQYWKMTAAQRENEKLSLMKEINELRLKLSKLRS 448
+LE E+K LKEK N L +Q+ + K T ++ + +I + KL++++S
Sbjct: 364 DLELELKQLKEKQNKLKSGIQRNRGDKNTVSKMSESLREVDAKIESINRKLNRIQS 419
>L46861-1|AAA74747.1| 2553|Caenorhabditis elegans talin protein.
Length = 2553
Score = 28.3 bits (60), Expect = 7.6
Identities = 34/148 (22%), Positives = 62/148 (41%), Gaps = 2/148 (1%)
Frame = +2
Query: 368 AAQRENEKLSLMKEINELRLKLSKLRSTGGLQAQNLDTAIQAASEKALAHLVRASGEIAH 547
AAQ ENE L I KL++LR +Q +N ++ + + ++ A G I H
Sbjct: 2320 AAQAENELLGAASSIEAASAKLAELRPRQIVQ-ENTQEIVETEFDDNI--IISAKG-ILH 2375
Query: 548 TIDLAKAYMRDRQELEASSPRWSAISGTPSTDKAERIHRVPPTIMGGQSIQPVVALSRTL 727
+ + Q A R +A GT + +E + ++ S+ + + TL
Sbjct: 2376 AVHTLMRSASNAQRELAMQGR-AAAGGTGTYQWSEGLISAARVVVA--SVHKLCDAANTL 2432
Query: 728 L--NTSNPRLTSRSPNQNRNVSERAVPC 805
+ T+ RL S + + + ++ V C
Sbjct: 2433 MKGQTTEERLISAAKQVSSSTAQLLVAC 2460
>AC025726-17|AAK73909.2| 2553|Caenorhabditis elegans Hypothetical
protein Y71G12B.11a protein.
Length = 2553
Score = 28.3 bits (60), Expect = 7.6
Identities = 34/148 (22%), Positives = 62/148 (41%), Gaps = 2/148 (1%)
Frame = +2
Query: 368 AAQRENEKLSLMKEINELRLKLSKLRSTGGLQAQNLDTAIQAASEKALAHLVRASGEIAH 547
AAQ ENE L I KL++LR +Q +N ++ + + ++ A G I H
Sbjct: 2320 AAQAENELLGAASSIEAASAKLAELRPRQIVQ-ENTQEIVETEFDDNI--IISAKG-ILH 2375
Query: 548 TIDLAKAYMRDRQELEASSPRWSAISGTPSTDKAERIHRVPPTIMGGQSIQPVVALSRTL 727
+ + Q A R +A GT + +E + ++ S+ + + TL
Sbjct: 2376 AVHTLMRSASNAQRELAMQGR-AAAGGTGTYQWSEGLISAARVVVA--SVHKLCDAANTL 2432
Query: 728 L--NTSNPRLTSRSPNQNRNVSERAVPC 805
+ T+ RL S + + + ++ V C
Sbjct: 2433 MKGQTTEERLISAAKQVSSSTAQLLVAC 2460
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,061,550
Number of Sequences: 27780
Number of extensions: 361426
Number of successful extensions: 1175
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1062
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1175
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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