Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_A10
         (876 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family p...    26   0.52 
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    25   0.92 
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             24   2.1  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   2.8  
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    23   3.7  
AY739658-1|AAU85297.1|  664|Apis mellifera hyperpolarization-act...    22   8.5  
AY280848-1|AAQ16312.1|  632|Apis mellifera hyperpolarization-act...    22   8.5  

>AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family
           protein protein.
          Length = 166

 Score = 25.8 bits (54), Expect = 0.52
 Identities = 17/70 (24%), Positives = 32/70 (45%)
 Frame = +2

Query: 443 RSTGGLQAQNLDTAIQAASEKALAHLVRASGEIAHTIDLAKAYMRDRQELEASSPRWSAI 622
           R  GG+ ++N+D          L +L+R SG++ + I        +     +  PR +++
Sbjct: 40  RCMGGINSRNMDIEHDPGLAAVLQYLIR-SGQL-NIISSDHDDSDEEYAANSQPPRITSV 97

Query: 623 SGTPSTDKAE 652
             T   DK+E
Sbjct: 98  PNTSRLDKSE 107


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 25.0 bits (52), Expect = 0.92
 Identities = 9/24 (37%), Positives = 14/24 (58%), Gaps = 2/24 (8%)
 Frame = -3

Query: 676 CW--WYAVDPLSFICTRSTTDCTP 611
           CW  ++  + +  ICT+ T DC P
Sbjct: 631 CWLPFFTCNIMDAICTKLTADCQP 654


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 14/62 (22%), Positives = 30/62 (48%)
 Frame = +2

Query: 482 AIQAASEKALAHLVRASGEIAHTIDLAKAYMRDRQELEASSPRWSAISGTPSTDKAERIH 661
           A+ AA    +  +    G  A+T +  +A +RD Q  +  + R + I G P +    +++
Sbjct: 570 AVAAAGVGGVPVVGAGGGRRAYTEEELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVY 629

Query: 662 RV 667
           ++
Sbjct: 630 KL 631


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 12/43 (27%), Positives = 25/43 (58%)
 Frame = -2

Query: 170 FLIICKIQFIVS*NRISKLEYSQFKMSDEQEKSVKSQLGSQES 42
           F+I+C +   ++  +IS+LE +     +E + + KSQ+  Q +
Sbjct: 451 FMILCNLMRTMNRKQISELESNMQISPNELKPNDKSQVIKQNT 493



 Score = 23.4 bits (48), Expect = 2.8
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +3

Query: 588  SWKHHHHVGVQSVVLRVQIK 647
            +W +HH+V     + R Q+K
Sbjct: 1676 TWGYHHNVNKHCTIHRTQVK 1695


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 23.0 bits (47), Expect = 3.7
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +1

Query: 661 PRTTNNNGWSINSAGCCFESDFTQYK 738
           P+ T    W+ N AG C  +  T Y+
Sbjct: 107 PKLTPYPNWAQNKAGACGSAITTAYR 132


>AY739658-1|AAU85297.1|  664|Apis mellifera
           hyperpolarization-activated ion channelvariant L
           protein.
          Length = 664

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = -3

Query: 538 FSRCPNEVCQCLFTGSLDSCIQVL 467
           F R  N +C  L  G    C+Q L
Sbjct: 276 FMRIFNLICMMLLIGHWSGCLQFL 299


>AY280848-1|AAQ16312.1|  632|Apis mellifera
           hyperpolarization-activated ion channel protein.
          Length = 632

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = -3

Query: 538 FSRCPNEVCQCLFTGSLDSCIQVL 467
           F R  N +C  L  G    C+Q L
Sbjct: 244 FMRIFNLICMMLLIGHWSGCLQFL 267


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 218,027
Number of Sequences: 438
Number of extensions: 4232
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28402218
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)