Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP17_F_A09
(934 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z93388-8|CAB07656.1| 127|Caenorhabditis elegans Hypothetical pr... 109 3e-24
Z92789-4|CAB07221.1| 127|Caenorhabditis elegans Hypothetical pr... 109 3e-24
Z83245-10|CAB05838.1| 127|Caenorhabditis elegans Hypothetical p... 109 3e-24
Z83245-6|CAB05836.1| 127|Caenorhabditis elegans Hypothetical pr... 109 3e-24
Z82271-4|CAB05212.1| 127|Caenorhabditis elegans Hypothetical pr... 109 3e-24
Z81495-2|CAB04056.1| 127|Caenorhabditis elegans Hypothetical pr... 109 3e-24
Z81128-6|CAB03399.1| 127|Caenorhabditis elegans Hypothetical pr... 109 3e-24
Z73102-8|CAA97414.1| 127|Caenorhabditis elegans Hypothetical pr... 109 3e-24
Z70750-11|CAA94747.1| 127|Caenorhabditis elegans Hypothetical p... 109 3e-24
X15633-1|CAA33641.1| 127|Caenorhabditis elegans histone protein... 109 3e-24
U64845-8|AAC48024.1| 127|Caenorhabditis elegans Histone protein... 109 3e-24
U64843-8|AAF98222.1| 127|Caenorhabditis elegans Histone protein... 109 3e-24
U64843-5|AAF98219.1| 127|Caenorhabditis elegans Histone protein... 109 3e-24
U58750-7|AAB00647.1| 127|Caenorhabditis elegans Histone protein... 109 3e-24
U40934-9|AAA81686.1| 127|Caenorhabditis elegans Histone protein... 109 3e-24
AF047656-4|AAC05100.1| 127|Caenorhabditis elegans Histone prote... 109 3e-24
AC024696-8|AAK84512.1| 127|Caenorhabditis elegans Histone prote... 109 3e-24
AC024696-5|AAK84506.1| 127|Caenorhabditis elegans Histone prote... 109 3e-24
Z68222-1|CAA92497.1| 145|Caenorhabditis elegans Hypothetical pr... 71 1e-12
U61953-11|AAC48074.1| 140|Caenorhabditis elegans Hypothetical p... 62 4e-10
Z81064-7|CAB02960.2| 382|Caenorhabditis elegans Hypothetical pr... 30 2.1
AL031621-7|CAE46665.1| 382|Caenorhabditis elegans Hypothetical ... 30 2.1
AF039044-8|AAG24129.1| 717|Caenorhabditis elegans Nuclear hormo... 30 2.1
AL032656-3|CAD12890.1| 731|Caenorhabditis elegans Hypothetical ... 30 2.7
AF416781-1|AAL38510.1| 731|Caenorhabditis elegans PH domain pro... 30 2.7
AF324505-1|AAL49495.1| 731|Caenorhabditis elegans CED-12 protein. 30 2.7
AF039044-12|AAG24130.2| 405|Caenorhabditis elegans Hypothetical... 29 3.6
U00036-5|AAT92064.1| 446|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z68106-9|CAE17838.1| 551|Caenorhabditis elegans Hypothetical pr... 29 6.3
Z49207-10|CAE17907.1| 551|Caenorhabditis elegans Hypothetical p... 29 6.3
U50313-4|AAA92328.1| 417|Caenorhabditis elegans Hypothetical pr... 29 6.3
>Z93388-8|CAB07656.1| 127|Caenorhabditis elegans Hypothetical
protein T10C6.12 protein.
Length = 127
Score = 109 bits (262), Expect = 3e-24
Identities = 52/105 (49%), Positives = 68/105 (64%)
Frame = +3
Query: 84 THRKNKTRSSRAGLHFPVGRIHKILRNGNYAPRIGSGXXXXXXXXXXXXXXXXXXXXXXX 263
T K K+RSSRAGL FPVGR+H+ILR GNYA R+G+G
Sbjct: 12 TGGKAKSRSSRAGLQFPVGRLHRILRKGNYAQRVGAGAPVYLAAVLEYLAAEVLELAGNA 71
Query: 264 XKEMKKTRVIPRHILFAIKNDEELSRMMTGVTISQGGVLPAIQPV 398
++ KKTR+ PRH+ A++NDEEL++++ GVTI+QGGVLP IQ V
Sbjct: 72 ARDNKKTRIAPRHLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAV 116
>Z92789-4|CAB07221.1| 127|Caenorhabditis elegans Hypothetical
protein H02I12.7 protein.
Length = 127
Score = 109 bits (262), Expect = 3e-24
Identities = 52/105 (49%), Positives = 68/105 (64%)
Frame = +3
Query: 84 THRKNKTRSSRAGLHFPVGRIHKILRNGNYAPRIGSGXXXXXXXXXXXXXXXXXXXXXXX 263
T K K+RSSRAGL FPVGR+H+ILR GNYA R+G+G
Sbjct: 12 TGGKAKSRSSRAGLQFPVGRLHRILRKGNYAQRVGAGAPVYLAAVLEYLAAEVLELAGNA 71
Query: 264 XKEMKKTRVIPRHILFAIKNDEELSRMMTGVTISQGGVLPAIQPV 398
++ KKTR+ PRH+ A++NDEEL++++ GVTI+QGGVLP IQ V
Sbjct: 72 ARDNKKTRIAPRHLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAV 116
>Z83245-10|CAB05838.1| 127|Caenorhabditis elegans Hypothetical
protein ZK131.10 protein.
Length = 127
Score = 109 bits (262), Expect = 3e-24
Identities = 52/105 (49%), Positives = 68/105 (64%)
Frame = +3
Query: 84 THRKNKTRSSRAGLHFPVGRIHKILRNGNYAPRIGSGXXXXXXXXXXXXXXXXXXXXXXX 263
T K K+RSSRAGL FPVGR+H+ILR GNYA R+G+G
Sbjct: 12 TGGKAKSRSSRAGLQFPVGRLHRILRKGNYAQRVGAGAPVYLAAVLEYLAAEVLELAGNA 71
Query: 264 XKEMKKTRVIPRHILFAIKNDEELSRMMTGVTISQGGVLPAIQPV 398
++ KKTR+ PRH+ A++NDEEL++++ GVTI+QGGVLP IQ V
Sbjct: 72 ARDNKKTRIAPRHLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAV 116
>Z83245-6|CAB05836.1| 127|Caenorhabditis elegans Hypothetical
protein ZK131.6 protein.
Length = 127
Score = 109 bits (262), Expect = 3e-24
Identities = 52/105 (49%), Positives = 68/105 (64%)
Frame = +3
Query: 84 THRKNKTRSSRAGLHFPVGRIHKILRNGNYAPRIGSGXXXXXXXXXXXXXXXXXXXXXXX 263
T K K+RSSRAGL FPVGR+H+ILR GNYA R+G+G
Sbjct: 12 TGGKAKSRSSRAGLQFPVGRLHRILRKGNYAQRVGAGAPVYLAAVLEYLAAEVLELAGNA 71
Query: 264 XKEMKKTRVIPRHILFAIKNDEELSRMMTGVTISQGGVLPAIQPV 398
++ KKTR+ PRH+ A++NDEEL++++ GVTI+QGGVLP IQ V
Sbjct: 72 ARDNKKTRIAPRHLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAV 116
>Z82271-4|CAB05212.1| 127|Caenorhabditis elegans Hypothetical
protein F54E12.5 protein.
Length = 127
Score = 109 bits (262), Expect = 3e-24
Identities = 52/105 (49%), Positives = 68/105 (64%)
Frame = +3
Query: 84 THRKNKTRSSRAGLHFPVGRIHKILRNGNYAPRIGSGXXXXXXXXXXXXXXXXXXXXXXX 263
T K K+RSSRAGL FPVGR+H+ILR GNYA R+G+G
Sbjct: 12 TGGKAKSRSSRAGLQFPVGRLHRILRKGNYAQRVGAGAPVYLAAVLEYLAAEVLELAGNA 71
Query: 264 XKEMKKTRVIPRHILFAIKNDEELSRMMTGVTISQGGVLPAIQPV 398
++ KKTR+ PRH+ A++NDEEL++++ GVTI+QGGVLP IQ V
Sbjct: 72 ARDNKKTRIAPRHLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAV 116
>Z81495-2|CAB04056.1| 127|Caenorhabditis elegans Hypothetical
protein F08G2.2 protein.
Length = 127
Score = 109 bits (262), Expect = 3e-24
Identities = 52/105 (49%), Positives = 68/105 (64%)
Frame = +3
Query: 84 THRKNKTRSSRAGLHFPVGRIHKILRNGNYAPRIGSGXXXXXXXXXXXXXXXXXXXXXXX 263
T K K+RSSRAGL FPVGR+H+ILR GNYA R+G+G
Sbjct: 12 TGGKAKSRSSRAGLQFPVGRLHRILRKGNYAQRVGAGAPVYLAAVLEYLAAEVLELAGNA 71
Query: 264 XKEMKKTRVIPRHILFAIKNDEELSRMMTGVTISQGGVLPAIQPV 398
++ KKTR+ PRH+ A++NDEEL++++ GVTI+QGGVLP IQ V
Sbjct: 72 ARDNKKTRIAPRHLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAV 116
>Z81128-6|CAB03399.1| 127|Caenorhabditis elegans Hypothetical
protein T23D8.6 protein.
Length = 127
Score = 109 bits (262), Expect = 3e-24
Identities = 52/105 (49%), Positives = 68/105 (64%)
Frame = +3
Query: 84 THRKNKTRSSRAGLHFPVGRIHKILRNGNYAPRIGSGXXXXXXXXXXXXXXXXXXXXXXX 263
T K K+RSSRAGL FPVGR+H+ILR GNYA R+G+G
Sbjct: 12 TGGKAKSRSSRAGLQFPVGRLHRILRKGNYAQRVGAGAPVYLAAVLEYLAAEVLELAGNA 71
Query: 264 XKEMKKTRVIPRHILFAIKNDEELSRMMTGVTISQGGVLPAIQPV 398
++ KKTR+ PRH+ A++NDEEL++++ GVTI+QGGVLP IQ V
Sbjct: 72 ARDNKKTRIAPRHLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAV 116
>Z73102-8|CAA97414.1| 127|Caenorhabditis elegans Hypothetical
protein B0035.7 protein.
Length = 127
Score = 109 bits (262), Expect = 3e-24
Identities = 52/105 (49%), Positives = 68/105 (64%)
Frame = +3
Query: 84 THRKNKTRSSRAGLHFPVGRIHKILRNGNYAPRIGSGXXXXXXXXXXXXXXXXXXXXXXX 263
T K K+RSSRAGL FPVGR+H+ILR GNYA R+G+G
Sbjct: 12 TGGKAKSRSSRAGLQFPVGRLHRILRKGNYAQRVGAGAPVYLAAVLEYLAAEVLELAGNA 71
Query: 264 XKEMKKTRVIPRHILFAIKNDEELSRMMTGVTISQGGVLPAIQPV 398
++ KKTR+ PRH+ A++NDEEL++++ GVTI+QGGVLP IQ V
Sbjct: 72 ARDNKKTRIAPRHLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAV 116
>Z70750-11|CAA94747.1| 127|Caenorhabditis elegans Hypothetical
protein C50F4.13 protein.
Length = 127
Score = 109 bits (262), Expect = 3e-24
Identities = 52/105 (49%), Positives = 68/105 (64%)
Frame = +3
Query: 84 THRKNKTRSSRAGLHFPVGRIHKILRNGNYAPRIGSGXXXXXXXXXXXXXXXXXXXXXXX 263
T K K+RSSRAGL FPVGR+H+ILR GNYA R+G+G
Sbjct: 12 TGGKAKSRSSRAGLQFPVGRLHRILRKGNYAQRVGAGAPVYLAAVLEYLAAEVLELAGNA 71
Query: 264 XKEMKKTRVIPRHILFAIKNDEELSRMMTGVTISQGGVLPAIQPV 398
++ KKTR+ PRH+ A++NDEEL++++ GVTI+QGGVLP IQ V
Sbjct: 72 ARDNKKTRIAPRHLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAV 116
>X15633-1|CAA33641.1| 127|Caenorhabditis elegans histone protein
protein.
Length = 127
Score = 109 bits (262), Expect = 3e-24
Identities = 52/105 (49%), Positives = 68/105 (64%)
Frame = +3
Query: 84 THRKNKTRSSRAGLHFPVGRIHKILRNGNYAPRIGSGXXXXXXXXXXXXXXXXXXXXXXX 263
T K K+RSSRAGL FPVGR+H+ILR GNYA R+G+G
Sbjct: 12 TGGKAKSRSSRAGLQFPVGRLHRILRKGNYAQRVGAGAPVYLAAVLEYLAAEVLELAGNA 71
Query: 264 XKEMKKTRVIPRHILFAIKNDEELSRMMTGVTISQGGVLPAIQPV 398
++ KKTR+ PRH+ A++NDEEL++++ GVTI+QGGVLP IQ V
Sbjct: 72 ARDNKKTRIAPRHLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAV 116
>U64845-8|AAC48024.1| 127|Caenorhabditis elegans Histone protein 7
protein.
Length = 127
Score = 109 bits (262), Expect = 3e-24
Identities = 52/105 (49%), Positives = 68/105 (64%)
Frame = +3
Query: 84 THRKNKTRSSRAGLHFPVGRIHKILRNGNYAPRIGSGXXXXXXXXXXXXXXXXXXXXXXX 263
T K K+RSSRAGL FPVGR+H+ILR GNYA R+G+G
Sbjct: 12 TGGKAKSRSSRAGLQFPVGRLHRILRKGNYAQRVGAGAPVYLAAVLEYLAAEVLELAGNA 71
Query: 264 XKEMKKTRVIPRHILFAIKNDEELSRMMTGVTISQGGVLPAIQPV 398
++ KKTR+ PRH+ A++NDEEL++++ GVTI+QGGVLP IQ V
Sbjct: 72 ARDNKKTRIAPRHLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAV 116
>U64843-8|AAF98222.1| 127|Caenorhabditis elegans Histone protein 19
protein.
Length = 127
Score = 109 bits (262), Expect = 3e-24
Identities = 52/105 (49%), Positives = 68/105 (64%)
Frame = +3
Query: 84 THRKNKTRSSRAGLHFPVGRIHKILRNGNYAPRIGSGXXXXXXXXXXXXXXXXXXXXXXX 263
T K K+RSSRAGL FPVGR+H+ILR GNYA R+G+G
Sbjct: 12 TGGKAKSRSSRAGLQFPVGRLHRILRKGNYAQRVGAGAPVYLAAVLEYLAAEVLELAGNA 71
Query: 264 XKEMKKTRVIPRHILFAIKNDEELSRMMTGVTISQGGVLPAIQPV 398
++ KKTR+ PRH+ A++NDEEL++++ GVTI+QGGVLP IQ V
Sbjct: 72 ARDNKKTRIAPRHLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAV 116
>U64843-5|AAF98219.1| 127|Caenorhabditis elegans Histone protein 21
protein.
Length = 127
Score = 109 bits (262), Expect = 3e-24
Identities = 52/105 (49%), Positives = 68/105 (64%)
Frame = +3
Query: 84 THRKNKTRSSRAGLHFPVGRIHKILRNGNYAPRIGSGXXXXXXXXXXXXXXXXXXXXXXX 263
T K K+RSSRAGL FPVGR+H+ILR GNYA R+G+G
Sbjct: 12 TGGKAKSRSSRAGLQFPVGRLHRILRKGNYAQRVGAGAPVYLAAVLEYLAAEVLELAGNA 71
Query: 264 XKEMKKTRVIPRHILFAIKNDEELSRMMTGVTISQGGVLPAIQPV 398
++ KKTR+ PRH+ A++NDEEL++++ GVTI+QGGVLP IQ V
Sbjct: 72 ARDNKKTRIAPRHLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAV 116
>U58750-7|AAB00647.1| 127|Caenorhabditis elegans Histone protein 61
protein.
Length = 127
Score = 109 bits (262), Expect = 3e-24
Identities = 52/105 (49%), Positives = 68/105 (64%)
Frame = +3
Query: 84 THRKNKTRSSRAGLHFPVGRIHKILRNGNYAPRIGSGXXXXXXXXXXXXXXXXXXXXXXX 263
T K K+RSSRAGL FPVGR+H+ILR GNYA R+G+G
Sbjct: 12 TGGKAKSRSSRAGLQFPVGRLHRILRKGNYAQRVGAGAPVYLAAVLEYLAAEVLELAGNA 71
Query: 264 XKEMKKTRVIPRHILFAIKNDEELSRMMTGVTISQGGVLPAIQPV 398
++ KKTR+ PRH+ A++NDEEL++++ GVTI+QGGVLP IQ V
Sbjct: 72 ARDNKKTRIAPRHLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAV 116
>U40934-9|AAA81686.1| 127|Caenorhabditis elegans Histone protein 30
protein.
Length = 127
Score = 109 bits (262), Expect = 3e-24
Identities = 52/105 (49%), Positives = 68/105 (64%)
Frame = +3
Query: 84 THRKNKTRSSRAGLHFPVGRIHKILRNGNYAPRIGSGXXXXXXXXXXXXXXXXXXXXXXX 263
T K K+RSSRAGL FPVGR+H+ILR GNYA R+G+G
Sbjct: 12 TGGKAKSRSSRAGLQFPVGRLHRILRKGNYAQRVGAGAPVYLAAVLEYLAAEVLELAGNA 71
Query: 264 XKEMKKTRVIPRHILFAIKNDEELSRMMTGVTISQGGVLPAIQPV 398
++ KKTR+ PRH+ A++NDEEL++++ GVTI+QGGVLP IQ V
Sbjct: 72 ARDNKKTRIAPRHLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAV 116
>AF047656-4|AAC05100.1| 127|Caenorhabditis elegans Histone protein
33 protein.
Length = 127
Score = 109 bits (262), Expect = 3e-24
Identities = 52/105 (49%), Positives = 68/105 (64%)
Frame = +3
Query: 84 THRKNKTRSSRAGLHFPVGRIHKILRNGNYAPRIGSGXXXXXXXXXXXXXXXXXXXXXXX 263
T K K+RSSRAGL FPVGR+H+ILR GNYA R+G+G
Sbjct: 12 TGGKAKSRSSRAGLQFPVGRLHRILRKGNYAQRVGAGAPVYLAAVLEYLAAEVLELAGNA 71
Query: 264 XKEMKKTRVIPRHILFAIKNDEELSRMMTGVTISQGGVLPAIQPV 398
++ KKTR+ PRH+ A++NDEEL++++ GVTI+QGGVLP IQ V
Sbjct: 72 ARDNKKTRIAPRHLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAV 116
>AC024696-8|AAK84512.1| 127|Caenorhabditis elegans Histone protein
53 protein.
Length = 127
Score = 109 bits (262), Expect = 3e-24
Identities = 52/105 (49%), Positives = 68/105 (64%)
Frame = +3
Query: 84 THRKNKTRSSRAGLHFPVGRIHKILRNGNYAPRIGSGXXXXXXXXXXXXXXXXXXXXXXX 263
T K K+RSSRAGL FPVGR+H+ILR GNYA R+G+G
Sbjct: 12 TGGKAKSRSSRAGLQFPVGRLHRILRKGNYAQRVGAGAPVYLAAVLEYLAAEVLELAGNA 71
Query: 264 XKEMKKTRVIPRHILFAIKNDEELSRMMTGVTISQGGVLPAIQPV 398
++ KKTR+ PRH+ A++NDEEL++++ GVTI+QGGVLP IQ V
Sbjct: 72 ARDNKKTRIAPRHLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAV 116
>AC024696-5|AAK84506.1| 127|Caenorhabditis elegans Histone protein
51 protein.
Length = 127
Score = 109 bits (262), Expect = 3e-24
Identities = 52/105 (49%), Positives = 68/105 (64%)
Frame = +3
Query: 84 THRKNKTRSSRAGLHFPVGRIHKILRNGNYAPRIGSGXXXXXXXXXXXXXXXXXXXXXXX 263
T K K+RSSRAGL FPVGR+H+ILR GNYA R+G+G
Sbjct: 12 TGGKAKSRSSRAGLQFPVGRLHRILRKGNYAQRVGAGAPVYLAAVLEYLAAEVLELAGNA 71
Query: 264 XKEMKKTRVIPRHILFAIKNDEELSRMMTGVTISQGGVLPAIQPV 398
++ KKTR+ PRH+ A++NDEEL++++ GVTI+QGGVLP IQ V
Sbjct: 72 ARDNKKTRIAPRHLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAV 116
>Z68222-1|CAA92497.1| 145|Caenorhabditis elegans Hypothetical
protein ZK1251.1 protein.
Length = 145
Score = 70.9 bits (166), Expect = 1e-12
Identities = 42/114 (36%), Positives = 58/114 (50%), Gaps = 3/114 (2%)
Frame = +3
Query: 51 RVLPTEMSSKSTHRKNK--TRSSRAGLHFPVGRIHKILRNGNYAP-RIGSGXXXXXXXXX 221
R+L T + S +K K +RS+R+GL FPVGRIH+ LR RI +G
Sbjct: 10 RILNTSTKTSSAKKKKKRISRSTRSGLTFPVGRIHRKLRETTRGKQRISAGASVFMAATL 69
Query: 222 XXXXXXXXXXXXXXXKEMKKTRVIPRHILFAIKNDEELSRMMTGVTISQGGVLP 383
E KK+RV PRH+ AI D+E ++++ VT+ QGGV P
Sbjct: 70 EYLTTELMEMSAIAANESKKSRVTPRHLHLAIYGDQETAQLLDKVTLPQGGVTP 123
>U61953-11|AAC48074.1| 140|Caenorhabditis elegans Hypothetical
protein R08C7.3 protein.
Length = 140
Score = 62.5 bits (145), Expect = 4e-10
Identities = 37/106 (34%), Positives = 54/106 (50%), Gaps = 1/106 (0%)
Frame = +3
Query: 75 SKSTHRKNKTRSSRAGLHFPVGRIHKILRNGNYAP-RIGSGXXXXXXXXXXXXXXXXXXX 251
S + K +RS+RAGL FPVGRIH+ L+ + R+G+
Sbjct: 12 SGKSKSKVVSRSARAGLQFPVGRIHRFLKQRTTSSGRVGATAAVYSAAILEYLTAEVLEL 71
Query: 252 XXXXXKEMKKTRVIPRHILFAIKNDEELSRMMTGVTISQGGVLPAI 389
K++K R+ PRH+ AI+ DEEL ++ TI+ GGV+P I
Sbjct: 72 AGNASKDLKVKRITPRHLHLAIRGDEELDTLIK-ATIAGGGVIPHI 116
>Z81064-7|CAB02960.2| 382|Caenorhabditis elegans Hypothetical
protein F16B12.8 protein.
Length = 382
Score = 30.3 bits (65), Expect = 2.1
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = -2
Query: 156 GSCVSCPRGSEGRHAKTEFCSFCVCFWKTSLLVILSINLKE 34
G+C+ CP+ + GRH C C F++ ++ L K+
Sbjct: 21 GTCMICPKKASGRHYGVFSCCACKMFFRRVIVENLFYKCKQ 61
>AL031621-7|CAE46665.1| 382|Caenorhabditis elegans Hypothetical
protein F16B12.8 protein.
Length = 382
Score = 30.3 bits (65), Expect = 2.1
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = -2
Query: 156 GSCVSCPRGSEGRHAKTEFCSFCVCFWKTSLLVILSINLKE 34
G+C+ CP+ + GRH C C F++ ++ L K+
Sbjct: 21 GTCMICPKKASGRHYGVFSCCACKMFFRRVIVENLFYKCKQ 61
>AF039044-8|AAG24129.1| 717|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 83 protein.
Length = 717
Score = 30.3 bits (65), Expect = 2.1
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -2
Query: 156 GSCVSCPRGSEGRHAKTEFCSFCVCFWKTSL 64
G CV C + S GRH C C F++ +L
Sbjct: 367 GPCVICDQPSHGRHFGVLSCRACAAFFRRAL 397
>AL032656-3|CAD12890.1| 731|Caenorhabditis elegans Hypothetical
protein Y106G6E.5 protein.
Length = 731
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = -3
Query: 329 LVVFNGEQDMPRYDSGLFHFFCRVRRELQYFGGEVFQSRCEV 204
+V+F+ E P + + H F R RE+Q GGE+ + C V
Sbjct: 436 VVLFSTETPFPAVFACIVHLFHRTWREMQAKGGEMEKVACVV 477
>AF416781-1|AAL38510.1| 731|Caenorhabditis elegans PH domain
protein CED-12 protein.
Length = 731
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = -3
Query: 329 LVVFNGEQDMPRYDSGLFHFFCRVRRELQYFGGEVFQSRCEV 204
+V+F+ E P + + H F R RE+Q GGE+ + C V
Sbjct: 436 VVLFSTETPFPAVFACIVHLFHRTWREMQAKGGEMEKVACVV 477
>AF324505-1|AAL49495.1| 731|Caenorhabditis elegans CED-12 protein.
Length = 731
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = -3
Query: 329 LVVFNGEQDMPRYDSGLFHFFCRVRRELQYFGGEVFQSRCEV 204
+V+F+ E P + + H F R RE+Q GGE+ + C V
Sbjct: 436 VVLFSTETPFPAVFACIVHLFHRTWREMQAKGGEMEKVACVV 477
>AF039044-12|AAG24130.2| 405|Caenorhabditis elegans Hypothetical
protein F48G7.11 protein.
Length = 405
Score = 29.5 bits (63), Expect = 3.6
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = -2
Query: 156 GSCVSCPRGSEGRHAKTEFCSFCVCFWKTSLL 61
G CV C + S GRH C C F++ +++
Sbjct: 9 GPCVICGQPSHGRHFGVLSCRACAAFFRRAVM 40
>U00036-5|AAT92064.1| 446|Caenorhabditis elegans Hypothetical
protein R151.2d protein.
Length = 446
Score = 29.1 bits (62), Expect = 4.8
Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Frame = +2
Query: 74 FQKHTQKEQNSVFACRPSLPRGQDTQDP-QKRQLRSQDRFRSPDI 205
FQKH + +N P+LP +D DP R R + P +
Sbjct: 12 FQKHNRSARNEFLGTHPTLPVPEDILDPFVGRSTRPTESLTEPPV 56
>Z68106-9|CAE17838.1| 551|Caenorhabditis elegans Hypothetical
protein F41E7.9 protein.
Length = 551
Score = 28.7 bits (61), Expect = 6.3
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = +2
Query: 26 IGNSLRFIESITNRDVFQKHTQKEQNSVFACRPSLPRGQDTQDPQKRQLRSQ 181
I + R IE + N+ V+QK + QN RPS+P+ Q Q++ SQ
Sbjct: 346 IQDKARAIE-LRNQQVYQKQQIQSQNRKNERRPSVPQYHQQQHQQQQHEYSQ 396
>Z49207-10|CAE17907.1| 551|Caenorhabditis elegans Hypothetical
protein F41E7.9 protein.
Length = 551
Score = 28.7 bits (61), Expect = 6.3
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = +2
Query: 26 IGNSLRFIESITNRDVFQKHTQKEQNSVFACRPSLPRGQDTQDPQKRQLRSQ 181
I + R IE + N+ V+QK + QN RPS+P+ Q Q++ SQ
Sbjct: 346 IQDKARAIE-LRNQQVYQKQQIQSQNRKNERRPSVPQYHQQQHQQQQHEYSQ 396
>U50313-4|AAA92328.1| 417|Caenorhabditis elegans Hypothetical
protein F44C4.2 protein.
Length = 417
Score = 28.7 bits (61), Expect = 6.3
Identities = 11/40 (27%), Positives = 19/40 (47%)
Frame = -2
Query: 153 SCVSCPRGSEGRHAKTEFCSFCVCFWKTSLLVILSINLKE 34
SC+ C + S G H C C F++ + ++ L K+
Sbjct: 6 SCLVCKKASNGMHFGALTCRACAAFFRRATVLKLQYKCKQ 45
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,856,093
Number of Sequences: 27780
Number of extensions: 279332
Number of successful extensions: 787
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 747
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 767
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2402214122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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