Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_A08
         (876 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011542-1|AAS15678.1|   64|Drosophila melanogaster LP11709p pro...    35   0.13 
AL031581-3|CAB41345.1|   64|Drosophila melanogaster EG:115C2.12 ...    35   0.13 
AE014298-70|AAF45528.1|   64|Drosophila melanogaster CG13364-PA ...    35   0.13 

>BT011542-1|AAS15678.1|   64|Drosophila melanogaster LP11709p
           protein.
          Length = 64

 Score = 35.1 bits (77), Expect = 0.13
 Identities = 13/19 (68%), Positives = 17/19 (89%)
 Frame = +1

Query: 229 KRNPXKAPKKESKEMDEDD 285
           K+ P KAPKK+SK++DEDD
Sbjct: 8   KKKPLKAPKKDSKDLDEDD 26



 Score = 29.9 bits (64), Expect = 4.8
 Identities = 12/17 (70%), Positives = 15/17 (88%)
 Frame = +3

Query: 207 MSGREGGKKKPLXSTQE 257
           MSGREGGKKKPL + ++
Sbjct: 1   MSGREGGKKKPLKAPKK 17


>AL031581-3|CAB41345.1|   64|Drosophila melanogaster EG:115C2.12
           protein.
          Length = 64

 Score = 35.1 bits (77), Expect = 0.13
 Identities = 13/19 (68%), Positives = 17/19 (89%)
 Frame = +1

Query: 229 KRNPXKAPKKESKEMDEDD 285
           K+ P KAPKK+SK++DEDD
Sbjct: 8   KKKPLKAPKKDSKDLDEDD 26



 Score = 29.9 bits (64), Expect = 4.8
 Identities = 12/17 (70%), Positives = 15/17 (88%)
 Frame = +3

Query: 207 MSGREGGKKKPLXSTQE 257
           MSGREGGKKKPL + ++
Sbjct: 1   MSGREGGKKKPLKAPKK 17


>AE014298-70|AAF45528.1|   64|Drosophila melanogaster CG13364-PA
           protein.
          Length = 64

 Score = 35.1 bits (77), Expect = 0.13
 Identities = 13/19 (68%), Positives = 17/19 (89%)
 Frame = +1

Query: 229 KRNPXKAPKKESKEMDEDD 285
           K+ P KAPKK+SK++DEDD
Sbjct: 8   KKKPLKAPKKDSKDLDEDD 26



 Score = 29.9 bits (64), Expect = 4.8
 Identities = 12/17 (70%), Positives = 15/17 (88%)
 Frame = +3

Query: 207 MSGREGGKKKPLXSTQE 257
           MSGREGGKKKPL + ++
Sbjct: 1   MSGREGGKKKPLKAPKK 17


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,057,982
Number of Sequences: 53049
Number of extensions: 405773
Number of successful extensions: 792
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 758
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 792
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4250176164
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)