Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP17_F_A06
         (979 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z98048-2|CAI20491.1|  307|Homo sapiens solute carrier family 25 ...    36   0.23 
Y12860-1|CAA73367.1|  307|Homo sapiens peroxisomal integral memb...    36   0.23 
CR456577-1|CAG30463.1|  307|Homo sapiens SLC25A17 protein.             36   0.23 
BC012998-1|AAH12998.1|  307|Homo sapiens solute carrier family 2...    36   0.23 
BC005957-1|AAH05957.1|  307|Homo sapiens solute carrier family 2...    36   0.23 
AL049764-1|CAI20333.1|  307|Homo sapiens solute carrier family 2...    36   0.23 

>Z98048-2|CAI20491.1|  307|Homo sapiens solute carrier family 25
           (mitochondrial carrier; peroxisomal membrane protein,
           protein.
          Length = 307

 Score = 35.9 bits (79), Expect = 0.23
 Identities = 15/34 (44%), Positives = 24/34 (70%)
 Frame = +1

Query: 376 GSVVGMTIFHPLNTLRSRIQVEDSKKLQGSTLXL 477
           GSV  MT+F PL+T R R+QV++ +K + + + L
Sbjct: 19  GSVTAMTVFFPLDTARLRLQVDEKRKSKTTHMVL 52


>Y12860-1|CAA73367.1|  307|Homo sapiens peroxisomal integral
           membrane protein protein.
          Length = 307

 Score = 35.9 bits (79), Expect = 0.23
 Identities = 15/34 (44%), Positives = 24/34 (70%)
 Frame = +1

Query: 376 GSVVGMTIFHPLNTLRSRIQVEDSKKLQGSTLXL 477
           GSV  MT+F PL+T R R+QV++ +K + + + L
Sbjct: 19  GSVTAMTVFFPLDTARLRLQVDEKRKSKTTHMVL 52


>CR456577-1|CAG30463.1|  307|Homo sapiens SLC25A17 protein.
          Length = 307

 Score = 35.9 bits (79), Expect = 0.23
 Identities = 15/34 (44%), Positives = 24/34 (70%)
 Frame = +1

Query: 376 GSVVGMTIFHPLNTLRSRIQVEDSKKLQGSTLXL 477
           GSV  MT+F PL+T R R+QV++ +K + + + L
Sbjct: 19  GSVTAMTVFFPLDTARLRLQVDEKRKSKTTHMVL 52


>BC012998-1|AAH12998.1|  307|Homo sapiens solute carrier family 25
           (mitochondrial carrier; peroxisomal membrane protein,
           protein.
          Length = 307

 Score = 35.9 bits (79), Expect = 0.23
 Identities = 15/34 (44%), Positives = 24/34 (70%)
 Frame = +1

Query: 376 GSVVGMTIFHPLNTLRSRIQVEDSKKLQGSTLXL 477
           GSV  MT+F PL+T R R+QV++ +K + + + L
Sbjct: 19  GSVTAMTVFFPLDTARLRLQVDEKRKSKTTHMVL 52


>BC005957-1|AAH05957.1|  307|Homo sapiens solute carrier family 25
           (mitochondrial carrier; peroxisomal membrane protein,
           protein.
          Length = 307

 Score = 35.9 bits (79), Expect = 0.23
 Identities = 15/34 (44%), Positives = 24/34 (70%)
 Frame = +1

Query: 376 GSVVGMTIFHPLNTLRSRIQVEDSKKLQGSTLXL 477
           GSV  MT+F PL+T R R+QV++ +K + + + L
Sbjct: 19  GSVTAMTVFFPLDTARLRLQVDEKRKSKTTHMVL 52


>AL049764-1|CAI20333.1|  307|Homo sapiens solute carrier family 25
           (mitochondrial carrier; peroxisomal membrane protein,
           protein.
          Length = 307

 Score = 35.9 bits (79), Expect = 0.23
 Identities = 15/34 (44%), Positives = 24/34 (70%)
 Frame = +1

Query: 376 GSVVGMTIFHPLNTLRSRIQVEDSKKLQGSTLXL 477
           GSV  MT+F PL+T R R+QV++ +K + + + L
Sbjct: 19  GSVTAMTVFFPLDTARLRLQVDEKRKSKTTHMVL 52


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,761,224
Number of Sequences: 237096
Number of extensions: 1211276
Number of successful extensions: 1227
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1207
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1227
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 13047299170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)