Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP17_F_A02
(886 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical pr... 240 8e-64
Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical pr... 233 1e-61
Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical p... 233 1e-61
AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome re... 37 0.022
AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome re... 37 0.022
Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical pr... 36 0.029
AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical ... 34 0.16
AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical ... 34 0.16
U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical pr... 33 0.36
AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome re... 32 0.63
U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome regu... 29 3.3
AF125450-3|AAD12817.1| 309|Caenorhabditis elegans Hypothetical ... 29 5.8
Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical p... 28 7.7
Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical p... 28 7.7
Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical p... 28 7.7
Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical pr... 28 7.7
Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical pr... 28 7.7
U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 28 7.7
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 28 7.7
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 28 7.7
DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48 expres... 28 7.7
>Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical
protein C06A1.1 protein.
Length = 809
Score = 240 bits (588), Expect = 8e-64
Identities = 104/170 (61%), Positives = 138/170 (81%)
Frame = +2
Query: 236 KDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPD 415
K +PNRLIV+++ DDNSV+A+SQAKM++L LFRGD V+LKGK+RKE+V I++SD++CP+
Sbjct: 26 KVKPNRLIVDQSEQDDNSVIAVSQAKMDELGLFRGDAVILKGKKRKESVAIIVSDESCPN 85
Query: 416 EKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYLKPYF 595
EK+RM DVVSI P P++ YG R+H+LPIDD++EGLTGNLF+V+LKPYF
Sbjct: 86 EKVRMNRVVRNNLRIRLGDVVSITPAPNLSYGTRIHVLPIDDTIEGLTGNLFDVFLKPYF 145
Query: 596 MEAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGXPI 745
+EAYRP+H+ D F V+ MR VEFKVVET+P+P CIV+PDT+IH +G PI
Sbjct: 146 LEAYRPLHKGDIFTVQAAMRTVEFKVVETEPAPACIVSPDTMIHYEGDPI 195
Score = 64.1 bits (149), Expect = 1e-10
Identities = 29/45 (64%), Positives = 34/45 (75%)
Frame = +1
Query: 748 REEXEEALNAVGYDDIXGXXKXLAXIKEMVELPLXXPSLFXAIGV 882
REE EE++N +GYDD+ G K LA IKEMVELPL P LF AIG+
Sbjct: 197 REEEEESMNDIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGI 241
>Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 233 bits (570), Expect = 1e-61
Identities = 106/170 (62%), Positives = 137/170 (80%)
Frame = +2
Query: 236 KDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPD 415
K RPNRLI++++ +DDNS+V LSQAKM++L LFRGD+V+LKGK+R+ETV IVL+ DNCP+
Sbjct: 26 KKRPNRLIIDQSDNDDNSMVMLSQAKMDELGLFRGDSVILKGKKRRETVSIVLNADNCPN 85
Query: 416 EKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYLKPYF 595
+KI+M DVVSI+ ++YGKRVH+LPIDD++EGLTGNLF+V+L+PYF
Sbjct: 86 DKIKMNKVVRNNLRSRLGDVVSISSA-QLEYGKRVHVLPIDDTIEGLTGNLFDVFLRPYF 144
Query: 596 MEAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGXPI 745
+AYRP+H+ D F V+ MR VEFKVVETDP+P CIVAPDTVIH +G PI
Sbjct: 145 TDAYRPVHKGDIFTVQAAMRTVEFKVVETDPAPACIVAPDTVIHYEGDPI 194
Score = 67.3 bits (157), Expect = 1e-11
Identities = 33/45 (73%), Positives = 34/45 (75%)
Frame = +1
Query: 748 REEXEEALNAVGYDDIXGXXKXLAXIKEMVELPLXXPSLFXAIGV 882
REE EEALN VGYDD+ G K LA IKEMVELPL P LF AIGV
Sbjct: 196 REEEEEALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGV 240
>Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 233 bits (570), Expect = 1e-61
Identities = 106/170 (62%), Positives = 137/170 (80%)
Frame = +2
Query: 236 KDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVLLKGKRRKETVCIVLSDDNCPD 415
K RPNRLI++++ +DDNS+V LSQAKM++L LFRGD+V+LKGK+R+ETV IVL+ DNCP+
Sbjct: 26 KKRPNRLIIDQSDNDDNSMVMLSQAKMDELGLFRGDSVILKGKKRRETVSIVLNADNCPN 85
Query: 416 EKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVEGLTGNLFEVYLKPYF 595
+KI+M DVVSI+ ++YGKRVH+LPIDD++EGLTGNLF+V+L+PYF
Sbjct: 86 DKIKMNKVVRNNLRSRLGDVVSISSA-QLEYGKRVHVLPIDDTIEGLTGNLFDVFLRPYF 144
Query: 596 MEAYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGXPI 745
+AYRP+H+ D F V+ MR VEFKVVETDP+P CIVAPDTVIH +G PI
Sbjct: 145 TDAYRPVHKGDIFTVQAAMRTVEFKVVETDPAPACIVAPDTVIHYEGDPI 194
Score = 67.3 bits (157), Expect = 1e-11
Identities = 33/45 (73%), Positives = 34/45 (75%)
Frame = +1
Query: 748 REEXEEALNAVGYDDIXGXXKXLAXIKEMVELPLXXPSLFXAIGV 882
REE EEALN VGYDD+ G K LA IKEMVELPL P LF AIGV
Sbjct: 196 REEEEEALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGV 240
>AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform b
protein.
Length = 398
Score = 36.7 bits (81), Expect = 0.022
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +1
Query: 778 VGYDDIXGXXKXLAXIKEMVELPLXXPSLFXAIGV 882
+ Y D+ G + + ++E+VELPL P LF +G+
Sbjct: 139 ISYSDVGGLAEQIRELREVVELPLINPELFKRVGI 173
>AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform a
protein.
Length = 406
Score = 36.7 bits (81), Expect = 0.022
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +1
Query: 778 VGYDDIXGXXKXLAXIKEMVELPLXXPSLFXAIGV 882
+ Y D+ G + + ++E+VELPL P LF +G+
Sbjct: 147 ISYSDVGGLAEQIRELREVVELPLINPELFKRVGI 181
>Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical
protein Y49E10.1 protein.
Length = 416
Score = 36.3 bits (80), Expect = 0.029
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +1
Query: 784 YDDIXGXXKXLAXIKEMVELPLXXPSLFXAIGV 882
Y+ + G K + IKE++ELP+ P LF A+G+
Sbjct: 158 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGI 190
>AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical
protein F56F11.4a protein.
Length = 411
Score = 33.9 bits (74), Expect = 0.16
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +1
Query: 784 YDDIXGXXKXLAXIKEMVELPLXXPSLFXAIGV 882
Y+ + G + IKE++ELP+ P LF A+G+
Sbjct: 153 YEMVGGLDTQIKEIKEVIELPVKHPELFDALGI 185
>AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical
protein F56F11.4b protein.
Length = 432
Score = 33.9 bits (74), Expect = 0.16
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +1
Query: 784 YDDIXGXXKXLAXIKEMVELPLXXPSLFXAIGV 882
Y+ + G + IKE++ELP+ P LF A+G+
Sbjct: 174 YEMVGGLDTQIKEIKEVIELPVKHPELFDALGI 206
>U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical
protein C10G11.8 protein.
Length = 438
Score = 32.7 bits (71), Expect = 0.36
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 784 YDDIXGXXKXLAXIKEMVELPLXXPSLFXAIGV 882
+DDI G + +KE VELPL P + +G+
Sbjct: 182 FDDIGGCESQIQELKESVELPLTHPEYYEEMGI 214
>AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 2 protein.
Length = 443
Score = 31.9 bits (69), Expect = 0.63
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 784 YDDIXGXXKXLAXIKEMVELPLXXPSLFXAIGV 882
Y D+ G + + IKE VELPL P + +G+
Sbjct: 187 YADVGGLDQQIQEIKEAVELPLTHPEYYEEMGI 219
>U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 3 protein.
Length = 414
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +1
Query: 778 VGYDDIXGXXKXLAXIKEMVELPLXXPSLFXAIGV 882
+ Y DI G ++E VELPL L+ IG+
Sbjct: 158 ISYGDIGGLDMQKQEVREAVELPLTHGELYQQIGI 192
>AF125450-3|AAD12817.1| 309|Caenorhabditis elegans Hypothetical
protein Y39F10A.3 protein.
Length = 309
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -2
Query: 210 IIRAFIICHFIQNLLLESKNYYNFY 136
++ AF++C + N+LL SK+ Y FY
Sbjct: 8 LLLAFVVCLTLFNVLLWSKSNYGFY 32
>Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 28.3 bits (60), Expect = 7.7
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +1
Query: 772 NAVGYDDIXGXXKXLAXIKEMVELPLXXPSLF 867
++VG+D + G + +KE+V P+ P +F
Sbjct: 386 SSVGFDQVGGLGHHIQSLKEVVLFPMLYPEVF 417
>Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 28.3 bits (60), Expect = 7.7
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +1
Query: 772 NAVGYDDIXGXXKXLAXIKEMVELPLXXPSLF 867
++VG+D + G + +KE+V P+ P +F
Sbjct: 384 SSVGFDQVGGLGHHIQSLKEVVLFPMLYPEVF 415
>Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 28.3 bits (60), Expect = 7.7
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +1
Query: 772 NAVGYDDIXGXXKXLAXIKEMVELPLXXPSLF 867
++VG+D + G + +KE+V P+ P +F
Sbjct: 386 SSVGFDQVGGLGHHIQSLKEVVLFPMLYPEVF 417
>Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 28.3 bits (60), Expect = 7.7
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +1
Query: 772 NAVGYDDIXGXXKXLAXIKEMVELPLXXPSLF 867
++VG+D + G + +KE+V P+ P +F
Sbjct: 386 SSVGFDQVGGLGHHIQSLKEVVLFPMLYPEVF 417
>Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 28.3 bits (60), Expect = 7.7
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +1
Query: 772 NAVGYDDIXGXXKXLAXIKEMVELPLXXPSLF 867
++VG+D + G + +KE+V P+ P +F
Sbjct: 384 SSVGFDQVGGLGHHIQSLKEVVLFPMLYPEVF 415
>Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 28.3 bits (60), Expect = 7.7
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +1
Query: 772 NAVGYDDIXGXXKXLAXIKEMVELPLXXPSLF 867
++VG+D + G + +KE+V P+ P +F
Sbjct: 386 SSVGFDQVGGLGHHIQSLKEVVLFPMLYPEVF 417
>U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical
protein K06A9.1c protein.
Length = 825
Score = 28.3 bits (60), Expect = 7.7
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = -2
Query: 753 LTLIGSPSQCI-TVSGATMQNGDGSVSTTLNSTARMPPRTMKVSSRWIGR*ASMKYGFKY 577
+T+ GS S + TVSG+T+ G+ +TL S+ P + V S + +S
Sbjct: 341 ITISGSSSIIVSTVSGSTVSGSTGTSQSTLASSTATPGSSSTVPSSSSPQPSSQSPA-PN 399
Query: 576 TSNRLPVRPSTESSIGSM 523
T + P + S++S SM
Sbjct: 400 TGSTTPSQTSSQSPSPSM 417
>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
protein K06A9.1a protein.
Length = 1032
Score = 28.3 bits (60), Expect = 7.7
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = -2
Query: 753 LTLIGSPSQCI-TVSGATMQNGDGSVSTTLNSTARMPPRTMKVSSRWIGR*ASMKYGFKY 577
+T+ GS S + TVSG+T+ G+ +TL S+ P + V S + +S
Sbjct: 548 ITISGSSSIIVSTVSGSTVSGSTGTSQSTLASSTATPGSSSTVPSSSSPQPSSQSPA-PN 606
Query: 576 TSNRLPVRPSTESSIGSM 523
T + P + S++S SM
Sbjct: 607 TGSTTPSQTSSQSPSPSM 624
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical
protein K06A9.1b protein.
Length = 2232
Score = 28.3 bits (60), Expect = 7.7
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = -2
Query: 753 LTLIGSPSQCI-TVSGATMQNGDGSVSTTLNSTARMPPRTMKVSSRWIGR*ASMKYGFKY 577
+T+ GS S + TVSG+T+ G+ +TL S+ P + V S + +S
Sbjct: 548 ITISGSSSIIVSTVSGSTVSGSTGTSQSTLASSTATPGSSSTVPSSSSPQPSSQSPA-PN 606
Query: 576 TSNRLPVRPSTESSIGSM 523
T + P + S++S SM
Sbjct: 607 TGSTTPSQTSSQSPSPSM 624
>DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48
expression abnormal protein protein.
Length = 1291
Score = 28.3 bits (60), Expect = 7.7
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = +1
Query: 772 NAVGYDDIXGXXKXLAXIKEMVELPLXXPSLF 867
++VG+D + G + +KE+V P+ P +F
Sbjct: 386 SSVGFDQVGGLGHHIQSLKEVVLFPMLYPEVF 417
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,637,197
Number of Sequences: 27780
Number of extensions: 378260
Number of successful extensions: 957
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 878
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 955
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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