Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_P24
(974 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U70735-1|AAD03469.1| 297|Homo sapiens 34 kDa Mov34 homolog prot... 210 8e-54
BC002520-1|AAH02520.2| 327|Homo sapiens COP9 constitutive photo... 210 8e-54
U94855-1|AAD03467.1| 357|Homo sapiens translation initiation fa... 58 5e-08
CR456959-1|CAG33240.1| 357|Homo sapiens EIF3S5 protein. 58 5e-08
BT006894-1|AAP35540.1| 357|Homo sapiens eukaryotic translation ... 58 5e-08
BC000490-1|AAH00490.1| 357|Homo sapiens eukaryotic translation ... 58 5e-08
AK095574-1|BAC04577.1| 350|Homo sapiens protein ( Homo sapiens ... 58 5e-08
BC012606-1|AAH12606.1| 324|Homo sapiens proteasome (prosome, ma... 50 1e-05
BC000338-1|AAH00338.1| 326|Homo sapiens PSMD7 protein protein. 50 1e-05
D50063-1|BAA08780.1| 324|Homo sapiens proteasome subunit p40 / ... 50 2e-05
AF354444-1|AAK18634.1| 348|Homo sapiens IFP38 protein. 48 4e-05
>U70735-1|AAD03469.1| 297|Homo sapiens 34 kDa Mov34 homolog
protein.
Length = 297
Score = 210 bits (512), Expect = 8e-54
Identities = 100/172 (58%), Positives = 124/172 (72%)
Frame = +2
Query: 158 IMNVSEHWTRLKAQEGFPQTVVGALIGKQXGRNIEVMNXFELVXSMXXXXXXXXXXYYXL 337
I+N+S+HW R+++QEG P V+GALIGKQ GRNIEVMN FEL+ YY
Sbjct: 18 ILNISDHWIRMRSQEGRPVQVIGALIGKQEGRNIEVMNSFELLSHTVEEKIIIDKEYYYT 77
Query: 338 KXEQFKQVFSDMDFLGWYTTGDAPSERDIAVHRQICDINECPVMLMLNPAGRNGDQLPVV 517
K EQFKQVF +++FLGWYTTG P DI VH+Q+C+I E P+ L LNP ++ D LPV
Sbjct: 78 KEEQFKQVFKELEFLGWYTTGGPPDPSDIHVHKQVCEIIESPLFLKLNPMTKHTD-LPVS 136
Query: 518 XYESVIDVVNGRATMLLAPLTYTLAAEEAERIGVDHVARVSSGEAALNSXVA 673
+ESVID++NG ATML A LTYTLA EEAERIGVDHVAR+++ + NS VA
Sbjct: 137 VFESVIDIINGEATMLFAELTYTLATEEAERIGVDHVARMTATGSGENSTVA 188
>BC002520-1|AAH02520.2| 327|Homo sapiens COP9 constitutive
photomorphogenic homolog subunit 6 (Arabidopsis)
protein.
Length = 327
Score = 210 bits (512), Expect = 8e-54
Identities = 100/172 (58%), Positives = 124/172 (72%)
Frame = +2
Query: 158 IMNVSEHWTRLKAQEGFPQTVVGALIGKQXGRNIEVMNXFELVXSMXXXXXXXXXXYYXL 337
I+N+S+HW R+++QEG P V+GALIGKQ GRNIEVMN FEL+ YY
Sbjct: 48 ILNISDHWIRMRSQEGRPVQVIGALIGKQEGRNIEVMNSFELLSHTVEEKIIIDKEYYYT 107
Query: 338 KXEQFKQVFSDMDFLGWYTTGDAPSERDIAVHRQICDINECPVMLMLNPAGRNGDQLPVV 517
K EQFKQVF +++FLGWYTTG P DI VH+Q+C+I E P+ L LNP ++ D LPV
Sbjct: 108 KEEQFKQVFKELEFLGWYTTGGPPDPSDIHVHKQVCEIIESPLFLKLNPMTKHTD-LPVS 166
Query: 518 XYESVIDVVNGRATMLLAPLTYTLAAEEAERIGVDHVARVSSGEAALNSXVA 673
+ESVID++NG ATML A LTYTLA EEAERIGVDHVAR+++ + NS VA
Sbjct: 167 VFESVIDIINGEATMLFAELTYTLATEEAERIGVDHVARMTATGSGENSTVA 218
>U94855-1|AAD03467.1| 357|Homo sapiens translation initiation
factor 3 47 kDa subunit protein.
Length = 357
Score = 58.0 bits (134), Expect = 5e-08
Identities = 38/140 (27%), Positives = 64/140 (45%), Gaps = 1/140 (0%)
Frame = +2
Query: 218 VVGALIGKQXGRNIEVMNXFELVXSMXXXXXXXXXXYYXLKXEQFKQVFSDMDFLGWYTT 397
V+G L+G ++EV N F + + + E K+V + LGWY T
Sbjct: 116 VIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAVDMEFAKNMYELHKKVSPNELILGWYAT 175
Query: 398 GDAPSERDIAVHRQICDINECPVMLMLNPAGRNGDQLPVVXYESVIDVVNGRAT-MLLAP 574
G +E + +H P+ L ++ + +NG ++ + Y S + V GR ++ P
Sbjct: 176 GHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNG-RMSIKAYVSTLMGVPGRTMGVMFTP 234
Query: 575 LTYTLAAEEAERIGVDHVAR 634
LT A + ERIGVD + +
Sbjct: 235 LTVKYAYYDTERIGVDLIMK 254
>CR456959-1|CAG33240.1| 357|Homo sapiens EIF3S5 protein.
Length = 357
Score = 58.0 bits (134), Expect = 5e-08
Identities = 38/140 (27%), Positives = 64/140 (45%), Gaps = 1/140 (0%)
Frame = +2
Query: 218 VVGALIGKQXGRNIEVMNXFELVXSMXXXXXXXXXXYYXLKXEQFKQVFSDMDFLGWYTT 397
V+G L+G ++EV N F + + + E K+V + LGWY T
Sbjct: 116 VIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAVDMEFAKNMYELHKKVSPNELILGWYAT 175
Query: 398 GDAPSERDIAVHRQICDINECPVMLMLNPAGRNGDQLPVVXYESVIDVVNGRAT-MLLAP 574
G +E + +H P+ L ++ + +NG ++ + Y S + V GR ++ P
Sbjct: 176 GHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNG-RMSIKAYVSTLMGVPGRTMGVMFTP 234
Query: 575 LTYTLAAEEAERIGVDHVAR 634
LT A + ERIGVD + +
Sbjct: 235 LTVKYAYYDTERIGVDLIMK 254
>BT006894-1|AAP35540.1| 357|Homo sapiens eukaryotic translation
initiation factor 3, subunit 5 epsilon, 47kDa protein.
Length = 357
Score = 58.0 bits (134), Expect = 5e-08
Identities = 38/140 (27%), Positives = 64/140 (45%), Gaps = 1/140 (0%)
Frame = +2
Query: 218 VVGALIGKQXGRNIEVMNXFELVXSMXXXXXXXXXXYYXLKXEQFKQVFSDMDFLGWYTT 397
V+G L+G ++EV N F + + + E K+V + LGWY T
Sbjct: 116 VIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAVDMEFAKNMYELHKKVSPNELILGWYAT 175
Query: 398 GDAPSERDIAVHRQICDINECPVMLMLNPAGRNGDQLPVVXYESVIDVVNGRAT-MLLAP 574
G +E + +H P+ L ++ + +NG ++ + Y S + V GR ++ P
Sbjct: 176 GHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNG-RMSIKAYVSTLMGVPGRTMGVMFTP 234
Query: 575 LTYTLAAEEAERIGVDHVAR 634
LT A + ERIGVD + +
Sbjct: 235 LTVKYAYYDTERIGVDLIMK 254
>BC000490-1|AAH00490.1| 357|Homo sapiens eukaryotic translation
initiation factor 3, subunit 5 epsilon, 47kDa protein.
Length = 357
Score = 58.0 bits (134), Expect = 5e-08
Identities = 38/140 (27%), Positives = 64/140 (45%), Gaps = 1/140 (0%)
Frame = +2
Query: 218 VVGALIGKQXGRNIEVMNXFELVXSMXXXXXXXXXXYYXLKXEQFKQVFSDMDFLGWYTT 397
V+G L+G ++EV N F + + + E K+V + LGWY T
Sbjct: 116 VIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAVDMEFAKNMYELHKKVSPNELILGWYAT 175
Query: 398 GDAPSERDIAVHRQICDINECPVMLMLNPAGRNGDQLPVVXYESVIDVVNGRAT-MLLAP 574
G +E + +H P+ L ++ + +NG ++ + Y S + V GR ++ P
Sbjct: 176 GHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNG-RMSIKAYVSTLMGVPGRTMGVMFTP 234
Query: 575 LTYTLAAEEAERIGVDHVAR 634
LT A + ERIGVD + +
Sbjct: 235 LTVKYAYYDTERIGVDLIMK 254
>AK095574-1|BAC04577.1| 350|Homo sapiens protein ( Homo sapiens
cDNA FLJ38255 fis, clone FCBBF3001020, highly similar to
EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 5. ).
Length = 350
Score = 58.0 bits (134), Expect = 5e-08
Identities = 38/140 (27%), Positives = 64/140 (45%), Gaps = 1/140 (0%)
Frame = +2
Query: 218 VVGALIGKQXGRNIEVMNXFELVXSMXXXXXXXXXXYYXLKXEQFKQVFSDMDFLGWYTT 397
V+G L+G ++EV N F + + + E K+V + LGWY T
Sbjct: 109 VIGTLLGTVDKHSVEVTNCFSVPHNESEDEVAVDMEFAKNMYELHKKVSPNELILGWYAT 168
Query: 398 GDAPSERDIAVHRQICDINECPVMLMLNPAGRNGDQLPVVXYESVIDVVNGRAT-MLLAP 574
G +E + +H P+ L ++ + +NG ++ + Y S + V GR ++ P
Sbjct: 169 GHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNG-RMSIKAYVSTLMGVPGRTMGVMFTP 227
Query: 575 LTYTLAAEEAERIGVDHVAR 634
LT A + ERIGVD + +
Sbjct: 228 LTVKYAYYDTERIGVDLIMK 247
>BC012606-1|AAH12606.1| 324|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 7 (Mov34 homolog)
protein.
Length = 324
Score = 50.4 bits (115), Expect = 1e-05
Identities = 46/167 (27%), Positives = 77/167 (46%), Gaps = 8/167 (4%)
Frame = +2
Query: 158 IMNVSEHWTRLKAQEGFPQTVVGALIGKQXGRNIEVMNXFELVXS---MXXXXXXXXXXY 328
+++V +H+ R+ + G + VVG L+G + ++V N F + Y
Sbjct: 16 LLSVVDHFNRI-GKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPFDEDDKDDSVWFLDHDY 74
Query: 329 YXLKXEQFKQVFSDMDFLGWYTTGDAPSERDIAVH---RQICDINECPVMLMLNPAGRNG 499
FK+V + +GWY TG + DIA++ ++ C N V++ + P
Sbjct: 75 LENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINELMKRYCP-NSVLVIIDVKPKDLG- 132
Query: 500 DQLPVVXYESVIDVVN-GRATM-LLAPLTYTLAAEEAERIGVDHVAR 634
LP Y SV +V + G T +T + AEEAE +GV+H+ R
Sbjct: 133 --LPTEAYISVEEVHDDGTPTSKTFEHVTSEIGAEEAEEVGVEHLLR 177
>BC000338-1|AAH00338.1| 326|Homo sapiens PSMD7 protein protein.
Length = 326
Score = 50.4 bits (115), Expect = 1e-05
Identities = 46/167 (27%), Positives = 77/167 (46%), Gaps = 8/167 (4%)
Frame = +2
Query: 158 IMNVSEHWTRLKAQEGFPQTVVGALIGKQXGRNIEVMNXFELVXS---MXXXXXXXXXXY 328
+++V +H+ R+ + G + VVG L+G + ++V N F + Y
Sbjct: 16 LLSVVDHFNRI-GKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPFDEDDKDDSVWFLDHDY 74
Query: 329 YXLKXEQFKQVFSDMDFLGWYTTGDAPSERDIAVH---RQICDINECPVMLMLNPAGRNG 499
FK+V + +GWY TG + DIA++ ++ C N V++ + P
Sbjct: 75 LENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINELMKRYCP-NSVLVIIDVKPKDLG- 132
Query: 500 DQLPVVXYESVIDVVN-GRATM-LLAPLTYTLAAEEAERIGVDHVAR 634
LP Y SV +V + G T +T + AEEAE +GV+H+ R
Sbjct: 133 --LPTEAYISVEEVHDDGTPTSKTFEHVTSEIGAEEAEEVGVEHLLR 177
>D50063-1|BAA08780.1| 324|Homo sapiens proteasome subunit p40 /
Mov34 protein protein.
Length = 324
Score = 49.6 bits (113), Expect = 2e-05
Identities = 46/167 (27%), Positives = 76/167 (45%), Gaps = 8/167 (4%)
Frame = +2
Query: 158 IMNVSEHWTRLKAQEGFPQTVVGALIGKQXGRNIEVMNXFELVXS---MXXXXXXXXXXY 328
+++V +H+ R+ + G + VVG L+G + ++V N F + Y
Sbjct: 16 LLSVVDHFNRI-VKVGNQKRVVGVLLGSWQKKVLDVSNSFAVPFDEDDKDDSVWFLDHDY 74
Query: 329 YXLKXEQFKQVFSDMDFLGWYTTGDAPSERDIAVH---RQICDINECPVMLMLNPAGRNG 499
FK+V + +GWY TG + DIA++ ++ C N V++ + P
Sbjct: 75 LENMYGMFKKVNARERIVGWYHTGPKLHKNDIAINELMKRYCP-NSVLVIIDVKPKDLG- 132
Query: 500 DQLPVVXYESVI-DVVNGRATM-LLAPLTYTLAAEEAERIGVDHVAR 634
LP Y SV D +G T +T + AEEAE +GV+H+ R
Sbjct: 133 --LPTEAYISVEEDQDDGTPTSKTFEHVTSEIGAEEAEEVGVEHLLR 177
>AF354444-1|AAK18634.1| 348|Homo sapiens IFP38 protein.
Length = 348
Score = 48.4 bits (110), Expect = 4e-05
Identities = 35/139 (25%), Positives = 59/139 (42%)
Frame = +2
Query: 218 VVGALIGKQXGRNIEVMNXFELVXSMXXXXXXXXXXYYXLKXEQFKQVFSDMDFLGWYTT 397
V+G L+G ++EV N F + + + E K+V + LGWY
Sbjct: 106 VIGTLLGTVNKHSVEVTNCFSVSYN-ESDEVVVDMEFAKNMYELHKKVSPNELILGWYAA 164
Query: 398 GDAPSERDIAVHRQICDINECPVMLMLNPAGRNGDQLPVVXYESVIDVVNGRATMLLAPL 577
G +E + +H P+ L ++ + +NG + + Y S + V GR + PL
Sbjct: 165 GHDITEHSVLIHEYYSREAPNPIHLTVDTSLQNG-HMSIKAYVSTLMGVPGRTVGVFTPL 223
Query: 578 TYTLAAEEAERIGVDHVAR 634
T A + E I VD + +
Sbjct: 224 TVKYAYYDTECIRVDLIMK 242
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,012,054
Number of Sequences: 237096
Number of extensions: 1675327
Number of successful extensions: 2333
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2292
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2322
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12991778748
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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