Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_P23
(893 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23147-5|AAC46686.2| 308|Caenorhabditis elegans Hypothetical pr... 35 0.068
U64859-7|AAC69095.1| 344|Caenorhabditis elegans Serpentine rece... 31 0.84
AF068713-6|AAC17797.1| 282|Caenorhabditis elegans Serpentine re... 31 0.84
U53154-5|AAC25853.1| 347|Caenorhabditis elegans Hypothetical pr... 30 2.6
Z81124-6|CAB03375.1| 335|Caenorhabditis elegans Hypothetical pr... 29 3.4
AC006607-9|AAF60368.2| 995|Caenorhabditis elegans Hypothetical ... 29 5.9
AF022985-16|AAV28323.1| 307|Caenorhabditis elegans Hypothetical... 28 7.8
AC006757-4|AAF60545.1| 610|Caenorhabditis elegans Hypothetical ... 28 7.8
>U23147-5|AAC46686.2| 308|Caenorhabditis elegans Hypothetical
protein C18H9.1 protein.
Length = 308
Score = 35.1 bits (77), Expect = 0.068
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Frame = +2
Query: 437 HNCS-YGEVITS--FDWLLKLVLGSSESKTSQYPILQLITSSINFNGEANTMIYDLDKEM 607
H CS Y +++ + LLK VL +SE S+Y + +L+ +N + + +DKE
Sbjct: 90 HECSVYAQLLPKPLYQQLLKSVLRASEMGASKYDVKRLVDDYVNRLAKNGVLPDVIDKEP 149
Query: 608 VLRMINSLERVIT*MKY 658
+L + E IT Y
Sbjct: 150 ILPRVTLPESEITSQSY 166
>U64859-7|AAC69095.1| 344|Caenorhabditis elegans Serpentine
receptor, class h protein11 protein.
Length = 344
Score = 31.5 bits (68), Expect = 0.84
Identities = 13/35 (37%), Positives = 24/35 (68%)
Frame = -3
Query: 261 LFSTISEIFSSLRVYMLFIISLHIISKCSIEFIFL 157
LF S+IFS+ + +++ I ++IIS+C + F+ L
Sbjct: 36 LFRESSQIFSTYKYFIIVHIIINIISECYVSFMML 70
>AF068713-6|AAC17797.1| 282|Caenorhabditis elegans Serpentine
receptor, class bc (class b-like) protein 67 protein.
Length = 282
Score = 31.5 bits (68), Expect = 0.84
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Frame = -3
Query: 393 NKSKKAISFS*FQSLV-FKCSIIMLMSYLFVEMIVRSSCFAV*ITLFSTISEIFSSLRVY 217
+KS ++ +S F + + + CSII+ Y+ MI ++ I + I +R
Sbjct: 38 SKSDMSLVYSRFAADIGYSCSIIVFKLYVLAGMISKTFILKNIIFFVIRATVILGIIRTS 97
Query: 216 MLFIISL-HIISKCSIEF 166
+LFIISL II+ S +F
Sbjct: 98 LLFIISLDRIIALFSSQF 115
>U53154-5|AAC25853.1| 347|Caenorhabditis elegans Hypothetical
protein C33G8.10 protein.
Length = 347
Score = 29.9 bits (64), Expect = 2.6
Identities = 18/71 (25%), Positives = 38/71 (53%)
Frame = +2
Query: 137 TEMDIIFKKINSIEHFDIICNEIINNMYTRSDEKISEIVENNVIQTAKQELRTIISTNKY 316
T + I FKK++ IE+ I + ++ YT E+ ++ + NV + ++EL+ + +
Sbjct: 240 TAVPIHFKKLDKIEYMAIFLLLLFDDAYTNISEEGVKLCQ-NVRKVVQRELKGYQTDSNC 298
Query: 317 DINMIIEHLNT 349
D +E ++T
Sbjct: 299 DEMRFVETMDT 309
>Z81124-6|CAB03375.1| 335|Caenorhabditis elegans Hypothetical
protein T21B4.8 protein.
Length = 335
Score = 29.5 bits (63), Expect = 3.4
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = -3
Query: 399 FFNKSKKAISFS*FQSLVFKCSIIMLMSYLFVEMIVRSSCFAV*ITLFSTISEIFSSLRV 220
FF S ++F F S + + S EM S+C + +FST ++I S+ R
Sbjct: 187 FFEPSTLILAFDGFSETYIIFSYVFMFSIAIFEMTFFSAC-CIYYLVFSTTTQISSTTRK 245
Query: 219 YML 211
+ L
Sbjct: 246 FQL 248
>AC006607-9|AAF60368.2| 995|Caenorhabditis elegans Hypothetical
protein C09E7.7 protein.
Length = 995
Score = 28.7 bits (61), Expect = 5.9
Identities = 43/163 (26%), Positives = 72/163 (44%), Gaps = 8/163 (4%)
Frame = +2
Query: 194 CNEIINNMYTRSDEKISEIVENNVIQTAK----QELRTII-STNKYDINMIIEHLNTK-- 352
C E + N Y + I E V VI+ A+ +E + ST K +N++I +
Sbjct: 157 CYEFVKN-YDTILKHIKEEVRVAVIKAAQPLTHEEFDALDESTPKLSLNVLISMWKKEFS 215
Query: 353 DWNQEKLIAFLDLLKKKLSDIVLMSIYHHNCSYGEVITSFDWLLKLVLGSSESKTSQY-P 529
DW E+ F+D LK S I+ S+ Y E++ +K++ ++ + P
Sbjct: 216 DWKDEEFKYFIDFLK---SQIIEFSMQTRRERYLEMVLFHKRFVKIISKIMDNHPELFMP 272
Query: 530 ILQLITSSINFNGEANTMIYDLDKEMVLRMINSLERVIT*MKY 658
Q T+ N Y+ D++MV+R + L + I MKY
Sbjct: 273 YNQ--TNHPNVPIAVRVFTYE-DRKMVMR--SELFKAIN-MKY 309
>AF022985-16|AAV28323.1| 307|Caenorhabditis elegans Hypothetical
protein T15B7.1 protein.
Length = 307
Score = 28.3 bits (60), Expect = 7.8
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +2
Query: 509 SKTSQYPILQLITSSINFNGEANTMIYDL 595
SKT YP+L L N G A+T YDL
Sbjct: 199 SKTQNYPLLDLTMDWANPIGNASTAWYDL 227
>AC006757-4|AAF60545.1| 610|Caenorhabditis elegans Hypothetical
protein Y40C7B.5 protein.
Length = 610
Score = 28.3 bits (60), Expect = 7.8
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Frame = +2
Query: 143 MDIIFKKINSIE-HFDIICNEIINNMYTRSDEKISEI-VENNVIQTAKQELRTIISTNKY 316
+D I ++ I +FD I +I + + K EI V NNV + TII +K
Sbjct: 336 LDAIKQESKDISLNFDTI-KQIEKEEFNKITGKYKEIDVSNNVTNDDIIKEITIIYKDKN 394
Query: 317 DINMIIEHLNTKDWNQEKLIAFL 385
D +I++++N K+ + K I L
Sbjct: 395 DSTIILKNMNHKENDNSKKINLL 417
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,935,281
Number of Sequences: 27780
Number of extensions: 326216
Number of successful extensions: 890
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 851
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 889
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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