Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_P22
(901 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000D56936 Cluster: PREDICTED: similar to BSD domain... 135 2e-30
UniRef50_Q7QHB5 Cluster: ENSANGP00000012651; n=3; Culicidae|Rep:... 101 2e-20
UniRef50_A2BIJ3 Cluster: BSD domain-containing protein 1; n=5; C... 75 3e-12
UniRef50_Q9NW68 Cluster: BSD domain-containing protein 1; n=38; ... 67 5e-10
UniRef50_Q965R9 Cluster: Putative uncharacterized protein; n=2; ... 39 0.15
UniRef50_Q0AXB8 Cluster: Sensor protein; n=1; Syntrophomonas wol... 37 0.81
UniRef50_UPI00015B5EB7 Cluster: PREDICTED: similar to ENSANGP000... 35 2.5
UniRef50_A6P0J3 Cluster: Putative uncharacterized protein; n=1; ... 35 3.3
UniRef50_Q60BX5 Cluster: Cytochrome c5530 family protein; n=1; M... 34 4.3
UniRef50_Q2SSB8 Cluster: Putative uncharacterized protein; n=1; ... 34 4.3
UniRef50_A4RQI5 Cluster: Predicted protein; n=2; Ostreococcus|Re... 34 4.3
UniRef50_Q5VV41 Cluster: Rho guanine nucleotide exchange factor ... 34 4.3
UniRef50_A4SYL2 Cluster: RNA-metabolising metallo-beta-lactamase... 34 5.7
UniRef50_Q4PC09 Cluster: Putative uncharacterized protein; n=1; ... 34 5.7
UniRef50_Q3EZB8 Cluster: Putative uncharacterized protein; n=1; ... 33 7.5
UniRef50_A5NLZ8 Cluster: LigA; n=1; Methylobacterium sp. 4-46|Re... 33 7.5
UniRef50_A2DY14 Cluster: DNA polymerase; n=2; Trichomonas vagina... 33 7.5
UniRef50_UPI000023DE19 Cluster: hypothetical protein FG05166.1; ... 33 9.9
UniRef50_A7IE16 Cluster: Beta-ketoacyl synthase; n=1; Xanthobact... 33 9.9
UniRef50_A5KM38 Cluster: Putative uncharacterized protein; n=1; ... 33 9.9
UniRef50_P42804 Cluster: Glutamyl-tRNA reductase 1, chloroplast ... 33 9.9
>UniRef50_UPI0000D56936 Cluster: PREDICTED: similar to BSD domain
containing 1; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to BSD domain containing 1 - Tribolium castaneum
Length = 319
Score = 135 bits (326), Expect = 2e-30
Identities = 70/138 (50%), Positives = 95/138 (68%), Gaps = 5/138 (3%)
Frame = +2
Query: 239 KQSGNWWDSWLSSAKTKSAEVYTMVKKDLDEIGSAVKCEASHVFSTTSNVIGKTLKLDVP 418
+Q NW+ SWL++AK KS++V VKKDL+E G+AVK EAS+V S+T NVI KT KLD P
Sbjct: 3 EQDDNWFGSWLNAAKDKSSKVLEFVKKDLEEFGTAVKNEASYVVSSTGNVIEKTFKLDTP 62
Query: 419 ESPANAMKKSISTFIGQVSTVLNPEPDDEDDTEVIL--SSGDTTMLSTYKKELEALQRVD 592
+S A++MK+S S+F+GQ++TVLNP PDD DTE IL +T L+ +K + LQ+ D
Sbjct: 63 DSTASSMKRSFSSFLGQMNTVLNPTPDD-SDTEAILIGEDSETVPLTKLQKAIYELQKED 121
Query: 593 ATFI---VPAYSPEFEAW 637
TF A + +FE W
Sbjct: 122 VTFTNDPEEALAKKFECW 139
>UniRef50_Q7QHB5 Cluster: ENSANGP00000012651; n=3; Culicidae|Rep:
ENSANGP00000012651 - Anopheles gambiae str. PEST
Length = 193
Score = 101 bits (243), Expect = 2e-20
Identities = 57/155 (36%), Positives = 88/155 (56%), Gaps = 1/155 (0%)
Frame = +2
Query: 245 SGNWWDSWLSSAKTKSAEVYTMVKKDLDEIGSAVKCEASHVFSTTSNVIGKTLKLDVPES 424
S +WW SW+ +A+TKSA V VK DL E+ + VK EAS + + +G++L L P+S
Sbjct: 43 SSSWWGSWIDTARTKSASVLEAVKNDLTELTTVVKTEAS----SATEALGRSLHLGEPDS 98
Query: 425 PANAMKKSISTFIGQVSTVLNPEPDDEDDTEVILSSGDTTM-LSTYKKELEALQRVDATF 601
AMKKS S+F+GQV+ L P +++++TE +L + D T+ L+ + K L LQ D T+
Sbjct: 99 AVGAMKKSFSSFLGQVTEALVPSLEEDEETEAVLITADGTLTLTGFYKHLAELQANDDTY 158
Query: 602 IVPAYSPEFEAWKASLETSEAGIVSPVSAARRLDS 706
+ E +K +E E + A+ L S
Sbjct: 159 LEEPADELREKYKRWMEVVEQEQFTEPRLAKHLAS 193
>UniRef50_A2BIJ3 Cluster: BSD domain-containing protein 1; n=5;
Clupeocephala|Rep: BSD domain-containing protein 1 -
Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 412
Score = 74.5 bits (175), Expect = 3e-12
Identities = 45/148 (30%), Positives = 70/148 (47%), Gaps = 10/148 (6%)
Frame = +2
Query: 248 GNWWDSWLS----SAKTKSAEVYTMVKKDLDEIGSAVKCEASHVFSTTSNVIGKTLKLDV 415
G WW WL+ S K KSAE Y +K+DL E S V+ + + T+N I L ++
Sbjct: 6 GGWWGGWLTQSFQSVKDKSAEAYEFIKRDLTEFSSVVQHDTACSVVATANAIKSKLAVEG 65
Query: 416 PESPANAMKKSISTFIGQVSTVLNPEPDDEDDTEVI----LSSGDTTMLSTYKKELEALQ 583
+KK I+ +G ++ L P PD D +VI +G T + + K L +LQ
Sbjct: 66 SSETTEKVKKGITNILGVITDTLAPPPDKTIDCDVITLVATPTGTTEVYDSGKARLYSLQ 125
Query: 584 RVDATFIVPAYSP--EFEAWKASLETSE 661
AT+ P +F++W ++ E
Sbjct: 126 ADPATYCNEPDGPPQQFDSWLSTFSLEE 153
>UniRef50_Q9NW68 Cluster: BSD domain-containing protein 1; n=38;
Tetrapoda|Rep: BSD domain-containing protein 1 - Homo
sapiens (Human)
Length = 430
Score = 67.3 bits (157), Expect = 5e-10
Identities = 45/144 (31%), Positives = 66/144 (45%), Gaps = 10/144 (6%)
Frame = +2
Query: 236 EKQSGNWWDSWLSSA----KTKSAEVYTMVKKDLDEIGSAVKCEASHVFSTTSNVIGKTL 403
E + WW SWL + K KS+E +K+DL E V+ + + + T++V+ + L
Sbjct: 3 EGEDVGWWRSWLQQSYQAVKEKSSEALEFMKRDLTEFTQVVQHDTACTIAATASVVKEKL 62
Query: 404 KLDVPESPANAMKKSISTFIGQVSTVLNPEPDDEDDTEVI----LSSGDTTMLSTYKKEL 571
+ MKK +S F+G +S P PD D +VI SG K L
Sbjct: 63 ATEGSSGATEKMKKGLSDFLGVISDTFAPSPDKTIDCDVITLMGTPSGTAEPYDGTKARL 122
Query: 572 EALQRVDATFI-VPAYSPE-FEAW 637
+LQ AT+ P PE F+AW
Sbjct: 123 YSLQSDPATYCNEPDGPPELFDAW 146
>UniRef50_Q965R9 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 446
Score = 39.1 bits (87), Expect = 0.15
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +2
Query: 242 QSGNWWDSWLSSAKTKSAEVYTMVKKDLDEIGSAVKCEASHVFSTTSNVIG 394
Q +W S+L+SAK K+ +VKKDL+++ AV E + + S G
Sbjct: 117 QGSSWGASFLNSAKEKTMTTLDLVKKDLNDLSEAVSAEVTDLASAAKEGFG 167
>UniRef50_Q0AXB8 Cluster: Sensor protein; n=1; Syntrophomonas wolfei
subsp. wolfei str. Goettingen|Rep: Sensor protein -
Syntrophomonas wolfei subsp. wolfei (strain Goettingen)
Length = 763
Score = 36.7 bits (81), Expect = 0.81
Identities = 20/100 (20%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Frame = +2
Query: 254 WWDSWLSSAKTKSAEVYTMVKKDLDEIGSAVKCEASHVFSTTSNVIGKTLKLDVPESPAN 433
WW + ++ + + ++ T + +I + E + + + + K + + ++
Sbjct: 231 WWSIYCTAVRDEEDKI-TSYCSIIQDISEHKQAEENLKKAKEAAEVANRAKAEFLANMSH 289
Query: 434 AMKKSISTFIGQVSTVL--NPEPDDEDDTEVILSSGDTTM 547
++ ++ IG S L NPEPD +++ E+I +GDT +
Sbjct: 290 EIRTPLNAIIGMTSLSLLSNPEPDQKENLEIIKMAGDTLL 329
>UniRef50_UPI00015B5EB7 Cluster: PREDICTED: similar to
ENSANGP00000026589; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to ENSANGP00000026589 - Nasonia
vitripennis
Length = 1404
Score = 35.1 bits (77), Expect = 2.5
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +2
Query: 431 NAMKKSISTFIGQVSTVLNPEPDDEDDTEVILSSGDTTMLSTYKKELEALQRVDATFIV 607
++MKK S F+ + + L P P+D DT + S + + LE +++DA F V
Sbjct: 967 SSMKKGFSNFMTSLDSALKPSPEDGSDTISMQSDVSSDSENYVVVSLEDQEKIDAVFNV 1025
>UniRef50_A6P0J3 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 511
Score = 34.7 bits (76), Expect = 3.3
Identities = 19/51 (37%), Positives = 29/51 (56%)
Frame = +2
Query: 377 TSNVIGKTLKLDVPESPANAMKKSISTFIGQVSTVLNPEPDDEDDTEVILS 529
+S++I TL + VPE + ++I IG VSTVL +P D T ++ S
Sbjct: 365 SSDIIKNTLHVKVPEKRETTVNRAIIVVIGLVSTVLAIDPPDLIFTLIMFS 415
>UniRef50_Q60BX5 Cluster: Cytochrome c5530 family protein; n=1;
Methylococcus capsulatus|Rep: Cytochrome c5530 family
protein - Methylococcus capsulatus
Length = 969
Score = 34.3 bits (75), Expect = 4.3
Identities = 31/125 (24%), Positives = 51/125 (40%), Gaps = 2/125 (1%)
Frame = +2
Query: 485 NPEPDDEDDTEVILSSGDTTMLSTYKKELEALQRVDATFIVPAYSPEFEAWKASLETSEA 664
NP+P D VIL++G T + A D + A P A S+ ++ A
Sbjct: 166 NPDPADTVSPGVILTAGTYVFTLTVTDDKGATSAADTVQVTVAAPPASSA--GSINSTSA 223
Query: 665 GIVSPVSAARRLDSKSRAEGAVRQACAGCXSHTMNLGNGIYSV*PYFXISWPQLL--ASK 838
G ++ V+ SK + A H ++L I ++ P F + Q++ +K
Sbjct: 224 GSLAKVTTPVPEPSKVTSGNYGVLAVNDLGMHCVDLDTRIVNILPPFQVMLGQVIQKGTK 283
Query: 839 PSRNP 853
P NP
Sbjct: 284 PVINP 288
>UniRef50_Q2SSB8 Cluster: Putative uncharacterized protein; n=1;
Mycoplasma capricolum subsp. capricolum ATCC 27343|Rep:
Putative uncharacterized protein - Mycoplasma capricolum
subsp. capricolum (strain California kid / ATCC27343 /
NCTC 10154)
Length = 848
Score = 34.3 bits (75), Expect = 4.3
Identities = 27/101 (26%), Positives = 44/101 (43%)
Frame = +2
Query: 386 VIGKTLKLDVPESPANAMKKSISTFIGQVSTVLNPEPDDEDDTEVILSSGDTTMLSTYKK 565
V+ +KLD + +N + K I +G T L+ DD + S + + T K
Sbjct: 115 VLDSKIKLDSKNNSSNFLFKEIFKLVGLGETELDNFSDDITKILDLTISLNPIFVFTNFK 174
Query: 566 ELEALQRVDATFIVPAYSPEFEAWKASLETSEAGIVSPVSA 688
E+++ TF P F W +L TS+ G+V + A
Sbjct: 175 EIDSALN---TFF-EKLKPSFSNWIKTLSTSKEGLVKSIKA 211
>UniRef50_A4RQI5 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 3600
Score = 34.3 bits (75), Expect = 4.3
Identities = 36/132 (27%), Positives = 61/132 (46%)
Frame = +2
Query: 269 LSSAKTKSAEVYTMVKKDLDEIGSAVKCEASHVFSTTSNVIGKTLKLDVPESPANAMKKS 448
LS+A+T++ + K +EI S + E S ++N I LK ++ ++ +NA
Sbjct: 2523 LSAAETEARDAQEREVKLREEI-SRLTLEFEQKSSASANEIA-ALKAELKDAVSNAS--- 2577
Query: 449 ISTFIGQVSTVLNPEPDDEDDTEVILSSGDTTMLSTYKKELEALQRVDATFIVPAYSPEF 628
STF + T + + E L SGD T+ + K + +A +++ T V + E
Sbjct: 2578 -STFAAESETTVKEYKQRISELESKLKSGDDTVAAIAKLQADAQEQLAVT--VARLNEER 2634
Query: 629 EAWKASLETSEA 664
E A ET A
Sbjct: 2635 ERAVADAETKYA 2646
>UniRef50_Q5VV41 Cluster: Rho guanine nucleotide exchange factor 16;
n=24; Euteleostomi|Rep: Rho guanine nucleotide exchange
factor 16 - Homo sapiens (Human)
Length = 709
Score = 34.3 bits (75), Expect = 4.3
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +2
Query: 572 EALQRVDATFIVPAYSPEFEAWKASLETSEAGIVSPVSAARR 697
E Q+VDAT +V +Y P W E E GI+ +S R
Sbjct: 242 EGTQKVDATIVVKSYRPAQVTWSQLPEVVELGILDQLSTEER 283
>UniRef50_A4SYL2 Cluster: RNA-metabolising metallo-beta-lactamase;
n=8; Betaproteobacteria|Rep: RNA-metabolising
metallo-beta-lactamase - Polynucleobacter sp.
QLW-P1DMWA-1
Length = 471
Score = 33.9 bits (74), Expect = 5.7
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 4/106 (3%)
Frame = +2
Query: 293 AEVYTMVKKDLDEIGSAVKCEASHVFSTTSNVIGKTLK-LDVPESPANAMKKSISTFIGQ 469
A+ T+ + EI +K E F +++G + LD+ E A + S IG
Sbjct: 142 AQFETVEYGQIHEITPGIKLE----FRNAGHILGSAIAVLDIQEDGAQKKRCVFSGDIGM 197
Query: 470 VSTVLNPEPDDEDDTEVIL---SSGDTTMLSTYKKELEALQRVDAT 598
VL P+PD + +V+L + GD S + E E ++ + +T
Sbjct: 198 KGKVLMPDPDLISEADVVLIESTYGDRLHRSLSETEEELVEVISST 243
>UniRef50_Q4PC09 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 217
Score = 33.9 bits (74), Expect = 5.7
Identities = 28/102 (27%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Frame = +2
Query: 488 PEPDDEDDTEVILSSGDTTMLSTYKKELEALQRVDATFIVPAYSPEFEAWKASLETSEAG 667
PEP D T S GD + ST + L A++ V I + + +A++ L S A
Sbjct: 2 PEPILPDGTLSHTSHGDASTSSTPLELLRAVKEVQERRISVWHEYD-DAFETFLRPSTAV 60
Query: 668 IVSPVSAARR---LDSKSRAEGAVRQACAGCXSHTMNLGNGI 784
+P++ ++ L + S + + + CAGC S T+ L +
Sbjct: 61 HAAPINGSQNNVPLATASETDFSSGRGCAGCSSTTLPLSEDL 102
>UniRef50_Q3EZB8 Cluster: Putative uncharacterized protein; n=1;
Bacillus thuringiensis serovar israelensis ATCC
35646|Rep: Putative uncharacterized protein - Bacillus
thuringiensis serovar israelensis ATCC 35646
Length = 241
Score = 33.5 bits (73), Expect = 7.5
Identities = 29/105 (27%), Positives = 52/105 (49%)
Frame = +2
Query: 419 ESPANAMKKSISTFIGQVSTVLNPEPDDEDDTEVILSSGDTTMLSTYKKELEALQRVDAT 598
E A + ++I++ I Q + N E DED V++SS ++ KK+++ ++ V AT
Sbjct: 78 EEQAAVLSQNIASQIQQTNQ--NQENSDEDAPVVVISSPAPSLAENIKKQIDEVKTV-AT 134
Query: 599 FIVPAYSPEFEAWKASLETSEAGIVSPVSAARRLDSKSRAEGAVR 733
P E A + + + + +V+P + +D AEGA R
Sbjct: 135 -ETPVSLTEQIAQQVA-DKNNLAVVAPAMSEGPVDIPQPAEGAPR 177
>UniRef50_A5NLZ8 Cluster: LigA; n=1; Methylobacterium sp. 4-46|Rep:
LigA - Methylobacterium sp. 4-46
Length = 344
Score = 33.5 bits (73), Expect = 7.5
Identities = 20/48 (41%), Positives = 26/48 (54%)
Frame = +1
Query: 586 RGRYLHSAGLQSRV*GLEGQP*DIRGRYSVAGVGRQATRLEIPC*RRS 729
RGR LH+ G R G EGQ D R +++G GR ++R P R S
Sbjct: 267 RGRGLHAPGGGGRRGGAEGQRGDGAARPALSGAGRDSSRAAAPRARAS 314
>UniRef50_A2DY14 Cluster: DNA polymerase; n=2; Trichomonas
vaginalis|Rep: DNA polymerase - Trichomonas vaginalis G3
Length = 1045
Score = 33.5 bits (73), Expect = 7.5
Identities = 27/94 (28%), Positives = 40/94 (42%), Gaps = 1/94 (1%)
Frame = +2
Query: 308 MVKKDLDEIGSAVKCEASHVFSTTSNVIGKTLKLDVPESPANAMKKSISTFIGQVSTVLN 487
M KK D+ A+K A+ V+ T +GK L + ES + I V N
Sbjct: 613 MQKKVFDKRQLALKISANSVYGFTGATVGKLPCLQISESVTAYGRSMIEMTKELVENKYN 672
Query: 488 PEPDDEDDTEVILSSGDTTMLSTYKKEL-EALQR 586
+ DD VI D+ M++ L EA++R
Sbjct: 673 KQNGYSDDAHVIYGDTDSVMVNFGNITLEEAIKR 706
>UniRef50_UPI000023DE19 Cluster: hypothetical protein FG05166.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG05166.1 - Gibberella zeae PH-1
Length = 679
Score = 33.1 bits (72), Expect = 9.9
Identities = 19/82 (23%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
Frame = +2
Query: 263 SWLSSAKTKSAEVYTMVKKDLDEIGSAVKCEASHVFSTTSNVIGKTLKLDVPESPANAMK 442
+W+ A+T + V+KDL+ H+ +++I LKLD + +
Sbjct: 505 AWMG-AETDATHGLVEVEKDLERTQGQPAARRQHILDRQASIIDSILKLDTFQEFSKVRC 563
Query: 443 KSIS-TFIGQVSTVLNPEPDDE 505
+ I+ + + +LNPE D +
Sbjct: 564 QEITDVILSIIEPLLNPEADPD 585
>UniRef50_A7IE16 Cluster: Beta-ketoacyl synthase; n=1; Xanthobacter
autotrophicus Py2|Rep: Beta-ketoacyl synthase -
Xanthobacter sp. (strain Py2)
Length = 1832
Score = 33.1 bits (72), Expect = 9.9
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Frame = +2
Query: 524 LSSGDTTMLSTYKKELEA---LQRVDATFIVPAYSPEFEAWKASLETSEAGIVSPVSAAR 694
L +GD L Y ELEA R+ VPA+SP ++ + +LE + AGI +P SA
Sbjct: 736 LIAGDGDALKAYLAELEAAGIFARLLENVDVPAHSPAMDSLRPALEKALAGI-APQSAQV 794
Query: 695 R 697
R
Sbjct: 795 R 795
>UniRef50_A5KM38 Cluster: Putative uncharacterized protein; n=1;
Ruminococcus torques ATCC 27756|Rep: Putative
uncharacterized protein - Ruminococcus torques ATCC 27756
Length = 1812
Score = 33.1 bits (72), Expect = 9.9
Identities = 21/65 (32%), Positives = 34/65 (52%)
Frame = +2
Query: 392 GKTLKLDVPESPANAMKKSISTFIGQVSTVLNPEPDDEDDTEVILSSGDTTMLSTYKKEL 571
GKT +D+ E+ N +K+ STF+ Q+ L +E T + LSS + + T K +
Sbjct: 903 GKTYTIDISETNINELKEQASTFLNQLHPDL-INAKNELQTAIDLSSKELGTVLTKVKLM 961
Query: 572 EALQR 586
+ L R
Sbjct: 962 DQLYR 966
>UniRef50_P42804 Cluster: Glutamyl-tRNA reductase 1, chloroplast
precursor; n=36; Viridiplantae|Rep: Glutamyl-tRNA
reductase 1, chloroplast precursor - Arabidopsis
thaliana (Mouse-ear cress)
Length = 543
Score = 33.1 bits (72), Expect = 9.9
Identities = 31/117 (26%), Positives = 52/117 (44%), Gaps = 1/117 (0%)
Frame = +2
Query: 308 MVKKDLDEIGSAVKCEASHVFSTTSNVIGKTLKLDVPESPANAMKKSISTFIGQVSTVLN 487
++ + LDE+ A EA VF++T++ LK V P + + +S N
Sbjct: 327 IIYRPLDEM-LACASEADVVFTSTASETPLFLKEHVENLPQASPEVGGLRHFVDISVPRN 385
Query: 488 PEPD-DEDDTEVILSSGDTTMLSTYKKELEALQRVDATFIVPAYSPEFEAWKASLET 655
E +T + + D + KE + ++A I+ S +FEAW+ SLET
Sbjct: 386 VGSCVGEVETARVYNVDDLKEVVAANKEDRMRKAMEAQTIITEESTQFEAWRDSLET 442
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 838,835,941
Number of Sequences: 1657284
Number of extensions: 16586443
Number of successful extensions: 43500
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 41916
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43475
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 81571813589
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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