Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_P22
         (901 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_02_0082 - 10948508-10948912                                         31   1.6  
07_01_0789 - 6150257-6151046,6151167-6151390,6151816-6151991,615...    30   2.9  
10_08_0794 - 20624517-20624666,20624977-20625082,20625305-206254...    29   3.8  
02_05_0417 - 28796121-28796743,28796829-28796925,28797010-287970...    29   5.0  
11_01_0039 - 290960-291086,291615-291714,291809-292013,292466-29...    28   8.8  

>01_02_0082 - 10948508-10948912
          Length = 134

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = -1

Query: 691 GGRHRRHYTGLGCLKAGLPSLKLWTVGR 608
           GGRHR H+TG       +P L+L  +GR
Sbjct: 31  GGRHRGHWTGTEAAVVLVPHLRLMLLGR 58


>07_01_0789 -
           6150257-6151046,6151167-6151390,6151816-6151991,
           6152778-6153801
          Length = 737

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 21/84 (25%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
 Frame = +2

Query: 257 WDSWLSSAKTKSAEVYTMVKKDLDEIGSAVKCEASHVFSTTSNV--IGKTLKLDVPESPA 430
           +D +++  K     +YT +K ++  I + +K  +S    TT  +  +       + + P 
Sbjct: 531 FDKFMTYQKQYVGSLYTWIKLNVIPIDTNLKPNSSQPHETTPPIKRVLHAWHEILGKLPD 590

Query: 431 NAMKKSISTFIGQVSTVLNPEPDD 502
            A KK+I+TF   V T+L  + D+
Sbjct: 591 EAAKKAINTFAEIVKTILVHQEDE 614


>10_08_0794 -
           20624517-20624666,20624977-20625082,20625305-20625400,
           20625577-20625623,20625751-20626029,20626160-20626248,
           20626348-20626440,20626593-20626688,20627167-20627274,
           20627410-20627728
          Length = 460

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 16/44 (36%), Positives = 22/44 (50%)
 Frame = +2

Query: 530 SGDTTMLSTYKKELEALQRVDATFIVPAYSPEFEAWKASLETSE 661
           +G     +T   EL+ L RV +    PAYSPEF  +   + T E
Sbjct: 35  TGSLDASATAAMELQELDRVMSLPGQPAYSPEFRQYSGYVTTDE 78


>02_05_0417 -
           28796121-28796743,28796829-28796925,28797010-28797093,
           28797173-28797234,28797316-28797460,28797542-28797961,
           28798041-28798090,28798163-28798349,28798426-28798680,
           28798785-28798953,28799044-28799177,28799291-28799446,
           28799534-28799719,28799798-28799962,28800074-28800190,
           28800553-28800762,28800850-28801049,28801135-28801405,
           28801481-28801547,28801644-28801942,28802425-28802991
          Length = 1487

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = +2

Query: 572 EALQRVDATFIVPAYS-PEFEAWKASLETSEAG 667
           +A  + D   ++P YS PE+E WK SL  + +G
Sbjct: 538 QATNKRDKKIVLPFYSMPEYEQWKESLGGNASG 570


>11_01_0039 - 290960-291086,291615-291714,291809-292013,292466-292513,
            295071-295646,295828-296260,296470-297338,297433-298227,
            298709-298753,299135-299352,300055-300364,302715-302984
          Length = 1331

 Score = 28.3 bits (60), Expect = 8.8
 Identities = 21/103 (20%), Positives = 45/103 (43%), Gaps = 1/103 (0%)
 Frame = +2

Query: 257  WDSWLSSAKTKSAEVYTMVK-KDLDEIGSAVKCEASHVFSTTSNVIGKTLKLDVPESPAN 433
            WD W  +      E+   +K K L+    ++ C  S ++++      + L   V +    
Sbjct: 1084 WDRWTITGNITLRELLDWLKEKGLNAY--SISCGTSLLYNSMFPRHKERLDKKVVDVARE 1141

Query: 434  AMKKSISTFIGQVSTVLNPEPDDEDDTEVILSSGDTTMLSTYK 562
              K  +  +   +  V+  E DD++D ++ L+S  +   +TY+
Sbjct: 1142 VAKVEVPPYRRHLDVVVACEDDDDNDVDIPLNSLASLFPTTYQ 1184


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,268,191
Number of Sequences: 37544
Number of extensions: 480072
Number of successful extensions: 1345
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1301
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1345
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2542098580
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)