Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_P22
         (901 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024880-9|AAK85515.1|  446|Caenorhabditis elegans Hypothetical ...    39   0.004
Z79755-8|CAB02113.1|  270|Caenorhabditis elegans Hypothetical pr...    29   6.0  
AL110501-9|CAB54507.2|  802|Caenorhabditis elegans Hypothetical ...    29   6.0  
AL033514-40|CAD36501.1|  802|Caenorhabditis elegans Hypothetical...    29   6.0  
AJ319870-1|CAC67459.1|  802|Caenorhabditis elegans ZYG-8 protein...    29   6.0  
AF169201-1|AAF01678.1|  270|Caenorhabditis elegans CES-1 protein.      29   6.0  
Z81523-6|CAB04244.1| 2586|Caenorhabditis elegans Hypothetical pr...    28   7.9  

>AC024880-9|AAK85515.1|  446|Caenorhabditis elegans Hypothetical
           protein Y97E10AR.6 protein.
          Length = 446

 Score = 39.1 bits (87), Expect = 0.004
 Identities = 18/51 (35%), Positives = 28/51 (54%)
 Frame = +2

Query: 242 QSGNWWDSWLSSAKTKSAEVYTMVKKDLDEIGSAVKCEASHVFSTTSNVIG 394
           Q  +W  S+L+SAK K+     +VKKDL+++  AV  E + + S      G
Sbjct: 117 QGSSWGASFLNSAKEKTMTTLDLVKKDLNDLSEAVSAEVTDLASAAKEGFG 167


>Z79755-8|CAB02113.1|  270|Caenorhabditis elegans Hypothetical
           protein F43G9.11 protein.
          Length = 270

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 20/83 (24%), Positives = 43/83 (51%)
 Frame = +2

Query: 344 VKCEASHVFSTTSNVIGKTLKLDVPESPANAMKKSISTFIGQVSTVLNPEPDDEDDTEVI 523
           ++ + S   ST+S+    T   ++ +SP++    S+ +    +++   P+ + E+D +V 
Sbjct: 39  LQMQKSSAASTSSSSSSSTSSENLKKSPSSVQNTSVFSIDNILNSQKVPKLELENDEDV- 97

Query: 524 LSSGDTTMLSTYKKELEALQRVD 592
            SS  +   ST    L++LQ +D
Sbjct: 98  -SSSPSPTCSTTGYTLDSLQNLD 119


>AL110501-9|CAB54507.2|  802|Caenorhabditis elegans Hypothetical
           protein Y79H2A.11 protein.
          Length = 802

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
 Frame = +2

Query: 497 DDEDDTEVILSSGDTTMLSTYKKELEALQRVDATFIVPAYSPEF--EAWKASLETSEAG 667
           DD    +VI            + EL  LQ++D TFIV  Y   F  +++  SLE  E G
Sbjct: 506 DDRKAMKVIARENVIGKEHLIEMELAILQKIDHTFIVQLYDHWFVDDSYYLSLELIEMG 564


>AL033514-40|CAD36501.1|  802|Caenorhabditis elegans Hypothetical
           protein Y79H2A.11 protein.
          Length = 802

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
 Frame = +2

Query: 497 DDEDDTEVILSSGDTTMLSTYKKELEALQRVDATFIVPAYSPEF--EAWKASLETSEAG 667
           DD    +VI            + EL  LQ++D TFIV  Y   F  +++  SLE  E G
Sbjct: 506 DDRKAMKVIARENVIGKEHLIEMELAILQKIDHTFIVQLYDHWFVDDSYYLSLELIEMG 564


>AJ319870-1|CAC67459.1|  802|Caenorhabditis elegans ZYG-8 protein
           protein.
          Length = 802

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
 Frame = +2

Query: 497 DDEDDTEVILSSGDTTMLSTYKKELEALQRVDATFIVPAYSPEF--EAWKASLETSEAG 667
           DD    +VI            + EL  LQ++D TFIV  Y   F  +++  SLE  E G
Sbjct: 506 DDRKAMKVIARENVIGKEHLIEMELAILQKIDHTFIVQLYDHWFVDDSYYLSLELIEMG 564


>AF169201-1|AAF01678.1|  270|Caenorhabditis elegans CES-1 protein.
          Length = 270

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 20/83 (24%), Positives = 43/83 (51%)
 Frame = +2

Query: 344 VKCEASHVFSTTSNVIGKTLKLDVPESPANAMKKSISTFIGQVSTVLNPEPDDEDDTEVI 523
           ++ + S   ST+S+    T   ++ +SP++    S+ +    +++   P+ + E+D +V 
Sbjct: 39  LQMQKSSAASTSSSSSSSTSSENLKKSPSSVQNTSVFSIDNILNSQKVPKLELENDEDV- 97

Query: 524 LSSGDTTMLSTYKKELEALQRVD 592
            SS  +   ST    L++LQ +D
Sbjct: 98  -SSSPSPTCSTTGYTLDSLQNLD 119


>Z81523-6|CAB04244.1| 2586|Caenorhabditis elegans Hypothetical protein
            F32H2.5 protein.
          Length = 2586

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 19/46 (41%), Positives = 25/46 (54%)
 Frame = +2

Query: 317  KDLDEIGSAVKCEASHVFSTTSNVIGKTLKLDVPESPANAMKKSIS 454
            K LD   + V  E  +VFS T  ++ K +KLDV  SP N   + IS
Sbjct: 924  KGLDYTKTPVVFENINVFSAT--ILTKPIKLDVVLSPGNGYFEIIS 967


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,442,509
Number of Sequences: 27780
Number of extensions: 403515
Number of successful extensions: 1177
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1118
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1176
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2286823924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)