Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_P20
(892 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0223 - 22087076-22087340,22087448-22087726,22087808-220879... 86 4e-17
04_04_1098 + 30876785-30876835,30876846-30877171,30877396-308774... 38 0.008
01_06_1058 - 34147025-34147069,34147190-34147339,34147983-341481... 33 0.23
03_02_0907 - 12297523-12297891,12298051-12298200,12298356-122984... 32 0.53
04_04_0529 - 25997736-25998055,25998441-25998804,25999563-259996... 31 0.93
06_03_1130 - 27826384-27827039,27827800-27828031,27828120-278284... 31 1.6
11_06_0500 + 24362627-24362828,24363046-24363704,24364958-243653... 30 2.1
04_03_0496 + 16549333-16549465,16549620-16550020,16550412-165508... 29 3.8
03_01_0452 - 3465140-3466404,3466481-3467056,3467150-3467495 29 3.8
08_01_0626 - 5445676-5446687,5447099-5447430 29 5.0
01_06_1321 + 36280691-36281269 29 5.0
09_04_0694 - 19529084-19529201,19529464-19529544,19529637-195301... 29 6.6
03_06_0415 - 33775143-33775305,33775438-33775565,33775654-337757... 28 8.7
03_06_0195 + 32256771-32258792 28 8.7
03_06_0146 - 31976538-31978643,31978653-31978751 28 8.7
>03_05_0223 -
22087076-22087340,22087448-22087726,22087808-22087950,
22088029-22088133,22088272-22088465,22088561-22088753,
22088893-22089202,22089335-22089558,22089862-22089990,
22090019-22090078,22090426-22090617,22091463-22091522,
22091606-22091688,22092473-22092611,22092949-22093083,
22093187-22093462
Length = 928
Score = 85.8 bits (203), Expect = 4e-17
Identities = 51/128 (39%), Positives = 74/128 (57%), Gaps = 5/128 (3%)
Frame = +2
Query: 218 NPFEVHVNREKIKVLGKKSKHDKGLPGVSRAKAVQKRKETLGTEMKLMNKTNTFIDRRIG 397
NPFE +R K VLGKK K ++ G +R++A+ KR+ TL E + K++ F DRRIG
Sbjct: 57 NPFEAIWSRRKFDVLGKKRKGEERRIGRARSEAIHKRENTLLKEFEQSAKSSVFQDRRIG 116
Query: 398 EKNNQLSAEDKMIARFAAERVKQHNKKSIYNLAD---DEILTHRGQTLEQIEKFDD--PR 562
E++ L DK+I R E + + ++S YNL+D DE+ H +L + FD+ P
Sbjct: 117 ERDETLPEFDKVILRQQREHMAKLKRESKYNLSDDEEDEVDVHLPHSLSGKDDFDEEVPL 176
Query: 563 SDDEDEEG 586
D DEEG
Sbjct: 177 DDYSDEEG 184
>04_04_1098 +
30876785-30876835,30876846-30877171,30877396-30877418,
30877687-30879392
Length = 701
Score = 38.3 bits (85), Expect = 0.008
Identities = 31/127 (24%), Positives = 58/127 (45%), Gaps = 3/127 (2%)
Frame = +2
Query: 266 KKSKHDKGLPGVSRAKAVQKRKETLGTEMKLMNKTNTFIDRRIGEKNNQLSAEDKMIARF 445
KK K DKG S K+ +K K LG + + D + +KN++ +ED A++
Sbjct: 224 KKGKKDKGSDAKSHGKSSRKIK--LGHD-----SDSDHDDNKKKKKNSRYGSEDDSEAKY 276
Query: 446 AAERVKQHNKKSIYNLADDEILTHRGQTLEQIEKFD---DPRSDDEDEEGKAYGGLDYDF 616
++ +H K S ++ DD H+ ++ + D D SD ++ + D +
Sbjct: 277 DEKKHSKHLKNSRHDTDDDSESDHKNAKCKKSSRHDSESDSESDHKNARREKSSRHDSES 336
Query: 617 VAEGHFG 637
++G +G
Sbjct: 337 DSDGDYG 343
>01_06_1058 -
34147025-34147069,34147190-34147339,34147983-34148117,
34148391-34148449,34149142-34149258,34149448-34149625,
34149715-34149798,34150133-34150201,34150385-34150525,
34150781-34150873,34151338-34151466,34152033-34152371,
34152624-34152674
Length = 529
Score = 33.5 bits (73), Expect = 0.23
Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 4/90 (4%)
Frame = +2
Query: 242 REKIKVLGKKSKHDKGLPGVSRAKAVQKRKETLGTEMK-LMNKTNTFIDR---RIGEKNN 409
R ++ V K K +KGL G S+ KR+E + + L+ K +D R+ +N
Sbjct: 105 RRRLSVRDLKEKFEKGLSGASKLSEEAKRREAASLDRQVLLKKLRDVLDTLKGRVAGRNR 164
Query: 410 QLSAEDKMIARFAAERVKQHNKKSIYNLAD 499
+ E + A ++ Q + IY A+
Sbjct: 165 DDADEAISLVEALAVQLTQREGELIYEKAE 194
>03_02_0907 -
12297523-12297891,12298051-12298200,12298356-12298463,
12298693-12298815,12299039-12299312,12304895-12304973,
12305222-12305256,12305372-12305429,12306185-12307274
Length = 761
Score = 32.3 bits (70), Expect = 0.53
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 6/40 (15%)
Frame = +2
Query: 506 ILTHRGQTLEQ---IEKFDDPRSDDEDEEGK---AYGGLD 607
I RG+ L++ +E++DD DD+D++G YGGLD
Sbjct: 652 ICATRGEELDELGIVEEYDDDDDDDDDDDGDEHYVYGGLD 691
>04_04_0529 - 25997736-25998055,25998441-25998804,25999563-25999675,
25999880-25999989,26000155-26000311,26000390-26000915,
26001101-26001265,26002470-26002589,26003022-26003093,
26003422-26003499,26003965-26004057,26004491-26004647,
26005351-26005589,26006907-26007050,26007637-26007666,
26010610-26010993,26011486-26011554,26012353-26012418,
26013166-26013255,26013583-26013628,26014318-26014419,
26014552-26014694
Length = 1195
Score = 31.5 bits (68), Expect = 0.93
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +2
Query: 200 INKKKINPFEVHVNREKIKVLGKKSKHD 283
INK++I+ F VHV+ E + LG KS+ D
Sbjct: 1078 INKQEIDDFTVHVDSENLVPLGNKSEID 1105
>06_03_1130 - 27826384-27827039,27827800-27828031,27828120-27828491,
27829243-27829449,27829611-27829704,27829806-27829870,
27829946-27830398,27830467-27830760,27830837-27831295,
27831367-27831588,27831755-27831968,27832039-27832494,
27833280-27833389,27833468-27833644,27833758-27833979,
27834048-27834167,27834274-27834383,27834552-27834607,
27835252-27835440,27835602-27835775,27836066-27836281,
27837066-27837106,27837971-27837986,27838330-27838415,
27838737-27838910,27839093-27839149,27839720-27840064,
27840175-27840216,27840377-27840496,27840575-27840724,
27840830-27841534,27841609-27841954,27842978-27843080,
27844817-27844860,27845905-27846101,27846322-27846344,
27846802-27847122,27847406-27847579,27847843-27848047,
27848817-27848880,27850097-27850278,27850291-27850350,
27850688-27850748,27851249-27851313,27851491-27851569,
27851656-27852021,27852442-27852790,27852887-27852989,
27853103-27853373,27854296-27854405,27854515-27854652
Length = 3364
Score = 30.7 bits (66), Expect = 1.6
Identities = 10/38 (26%), Positives = 22/38 (57%)
Frame = -1
Query: 484 YTLFIVLFHSFSGKPRNHFIFSRQLVVFLTNTTINKCV 371
Y ++++H+F G+P +H + R + +F + I C+
Sbjct: 3159 YDTTVMIWHAFRGRPSDHVVMERPVHIFCGHDDIITCL 3196
>11_06_0500 +
24362627-24362828,24363046-24363704,24364958-24365300,
24366227-24366645
Length = 540
Score = 30.3 bits (65), Expect = 2.1
Identities = 27/120 (22%), Positives = 54/120 (45%), Gaps = 6/120 (5%)
Frame = +2
Query: 242 REKIKVLGKKSKHDKGLPGVSRAKAVQKRKETLGTEMKLMNKTNTFIDRR--IGEKNNQ- 412
R +I +G + +G+ V + ++ T+ +E + K ++ +G K+ +
Sbjct: 394 RNEILRIGGSDEMQQGVK-VDTTRVIENTASTVDSETPVEQKRRKKVETEYVLGGKDLEF 452
Query: 413 -LSAEDKMIARFAAERVKQHN--KKSIYNLADDEILTHRGQTLEQIEKFDDPRSDDEDEE 583
LS ED + F + +K ++ I N + + R E+ DDP SDD+D++
Sbjct: 453 ILSYEDDELETFDEDMLKDQAMVRQQIENFGYGFLHSWREVICTDSEEEDDPVSDDDDDD 512
>04_03_0496 +
16549333-16549465,16549620-16550020,16550412-16550880,
16552038-16552076,16553151-16553272,16553531-16553677,
16554097-16554186,16554274-16554398,16554567-16554772,
16554951-16555075,16555528-16555722,16556295-16556337,
16556762-16557267,16558198-16558570,16559772-16560062,
16560132-16561101,16561196-16561892,16562378-16562658,
16562731-16563400,16563860-16564034,16565103-16565659
Length = 2204
Score = 29.5 bits (63), Expect = 3.8
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +2
Query: 221 PFEVHVNREKIKVLGKKSKHDKGLPGVSRAKAVQKRKETLG 343
PF+V R +++ L S+ +G+PG + AKA E++G
Sbjct: 627 PFQVEKTRIQVQQLHNFSREQQGMPGPTTAKADLDIPESVG 667
>03_01_0452 - 3465140-3466404,3466481-3467056,3467150-3467495
Length = 728
Score = 29.5 bits (63), Expect = 3.8
Identities = 36/165 (21%), Positives = 64/165 (38%), Gaps = 1/165 (0%)
Frame = +2
Query: 170 DKVHSKRKAEINKKKINPFEVHVNREKIKVLGKKSKHDKGLPGVSRAKAVQKRKETLGTE 349
D S++ E N + PF+VH E + K G + + K E +
Sbjct: 423 DATGSRQFLETNYSNMEPFDVHATSEDEGDTSLEGLKQKVELGKKKMSILYKEFEAERSA 482
Query: 350 MKLMNKTNTFIDRRIGEKNNQLSAEDKMIARFAAERVKQHNKKSIYNLADDEILTHRGQT 529
+ + R+ E+ + E R E+ H++++I L D +LT R +
Sbjct: 483 SAVAASEAMAMINRLQEEKASMHMEALQYLRMMEEQA-DHDQEAIERLND--LLTEREKE 539
Query: 530 LEQIE-KFDDPRSDDEDEEGKAYGGLDYDFVAEGHFGGGMLSKTD 661
+ +E + D+ R E G +DF +G G+L +D
Sbjct: 540 MLDLEAELDNYRRLHEP------FGCKFDF-TDGDMASGVLDSSD 577
>08_01_0626 - 5445676-5446687,5447099-5447430
Length = 447
Score = 29.1 bits (62), Expect = 5.0
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +2
Query: 488 NLADDEILTHRGQTLEQIEKFDDPRSDDEDEEGKAYGGLDYD 613
N+ DDE G+ E+IE+ +D +DD+DEE + D D
Sbjct: 220 NVDDDE---DEGEEDEEIEEDEDENNDDDDEEEEMEEDEDLD 258
>01_06_1321 + 36280691-36281269
Length = 192
Score = 29.1 bits (62), Expect = 5.0
Identities = 16/32 (50%), Positives = 17/32 (53%)
Frame = +2
Query: 548 FDDPRSDDEDEEGKAYGGLDYDFVAEGHFGGG 643
F DDEDEEG+ GG D D A GGG
Sbjct: 42 FPVDEDDDEDEEGEGEGGND-DAPAAAAAGGG 72
>09_04_0694 -
19529084-19529201,19529464-19529544,19529637-19530136,
19530444-19530540,19530633-19530775,19531187-19531528,
19531810-19532031,19532292-19532330,19532386-19532601,
19533101-19533196,19533416-19533481,19533777-19533821,
19533903-19533965,19534274-19534344,19534599-19534699,
19534896-19534972,19535856-19535900
Length = 773
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/41 (31%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = +2
Query: 377 FIDRRIGEKN--NQLSAEDKMIARFAAERVKQHNKKSIYNL 493
FI + E++ +L+ +D ++A+ E V +NKK +Y+L
Sbjct: 537 FIHAKYAERDYVRKLNMDDSLVAQQMWENVSSNNKKGVYSL 577
>03_06_0415 -
33775143-33775305,33775438-33775565,33775654-33775761,
33775809-33775909,33776265-33776805,33777290-33777847
Length = 532
Score = 28.3 bits (60), Expect = 8.7
Identities = 17/71 (23%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Frame = +2
Query: 467 HNKKSIYNLADDE--ILTHRGQTLEQIEKFDDPRSDDEDEEGKAYGGLDYDFVAEGHFGG 640
H +K +Y + + HR +I++ D+ + D DE+ K+ D +EG
Sbjct: 61 HRRKELYLNGPEARGSVPHRSDASRKIKRDDNRAAGDHDEQNKSSKSKDGKHTSEGVLAL 120
Query: 641 GMLSKTDSKDG 673
+ S DG
Sbjct: 121 ACTRNSGSPDG 131
>03_06_0195 + 32256771-32258792
Length = 673
Score = 28.3 bits (60), Expect = 8.7
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +2
Query: 494 ADDEILTHRGQTLEQIEKFDDPRSDDEDEEGKAYGGLDYDFVAEGHFG 637
+DDE ++ + ++ E+ D DE+EE + +GG YD + FG
Sbjct: 277 SDDEEDSYSDEEIDDEEESDCDEEIDEEEE-EEHGGNKYDAIDNESFG 323
>03_06_0146 - 31976538-31978643,31978653-31978751
Length = 734
Score = 28.3 bits (60), Expect = 8.7
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = +2
Query: 494 ADDEILTHRGQTLEQIEKFDDPRSDDEDEEGKAYGGLDYDFVAEGHFG 637
+DDE ++ + ++ E+ D DE+EE + +GG YD + FG
Sbjct: 335 SDDEEDSYSDEEIDDEEESDCDEEIDEEEE-EEHGGNKYDAIDNESFG 381
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,287,890
Number of Sequences: 37544
Number of extensions: 311322
Number of successful extensions: 976
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 900
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 964
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -