Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_P20
(892 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024792-2|AAF60680.2| 813|Caenorhabditis elegans Hypothetical ... 126 2e-29
AF078790-14|AAC26930.1| 335|Caenorhabditis elegans Hypothetical... 34 0.16
Z46996-1|CAA87099.1| 472|Caenorhabditis elegans Hypothetical pr... 32 0.48
AF016683-7|AAM97999.1| 609|Caenorhabditis elegans Hypothetical ... 32 0.63
AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical... 31 1.1
U41534-7|AAB47599.3| 1743|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z72512-6|CAD44143.2| 657|Caenorhabditis elegans Hypothetical pr... 30 1.9
U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical p... 30 2.6
U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly glu... 30 2.6
U23139-6|AAK31489.2| 520|Caenorhabditis elegans Hypothetical pr... 30 2.6
Z81114-4|CAB03288.2| 688|Caenorhabditis elegans Hypothetical pr... 29 3.4
AY652944-1|AAT73711.1| 688|Caenorhabditis elegans guanylate cyc... 29 3.4
AC024843-1|AAR12983.3| 193|Caenorhabditis elegans Hypothetical ... 29 3.4
Z83241-3|CAB05818.1| 422|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z81120-9|CAB03349.1| 422|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z27081-3|CAH19085.1| 869|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z27081-2|CAA81607.2| 937|Caenorhabditis elegans Hypothetical pr... 29 4.5
AL032657-9|CAA21736.1| 829|Caenorhabditis elegans Hypothetical ... 29 4.5
Z93385-8|CAN86626.1| 560|Caenorhabditis elegans Hypothetical pr... 29 5.9
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 29 5.9
U88172-8|AAB42258.1| 312|Caenorhabditis elegans Hypothetical pr... 29 5.9
U50193-8|AAL11478.2| 394|Caenorhabditis elegans Hypothetical pr... 29 5.9
AF016427-8|AAB65355.1| 513|Caenorhabditis elegans Hypothetical ... 29 5.9
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 29 5.9
AF000198-2|AAB53055.2| 748|Caenorhabditis elegans Hypothetical ... 26 6.5
Z68213-1|CAA92435.2| 487|Caenorhabditis elegans Hypothetical pr... 28 7.8
U39850-5|AAM45368.1| 670|Caenorhabditis elegans Polyq (poly glu... 28 7.8
U28991-2|AAK68307.1| 679|Caenorhabditis elegans Kinesin-associa... 28 7.8
U28991-1|AAM22059.1| 696|Caenorhabditis elegans Kinesin-associa... 28 7.8
AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical... 28 7.8
AF149287-1|AAF99086.1| 696|Caenorhabditis elegans KAP protein. 28 7.8
AF000299-1|AAC47980.1| 210|Caenorhabditis elegans Hypothetical ... 28 7.8
AB017107-1|BAA88838.1| 679|Caenorhabditis elegans Kinesin assoc... 28 7.8
>AC024792-2|AAF60680.2| 813|Caenorhabditis elegans Hypothetical
protein Y48G1A.4 protein.
Length = 813
Score = 126 bits (304), Expect = 2e-29
Identities = 72/204 (35%), Positives = 110/204 (53%), Gaps = 5/204 (2%)
Frame = +2
Query: 206 KKKINPFEVHVNREKIKVLGKKSKHDKGLPGVSRAKAVQKRKETLGTEMKLMNKTNTFID 385
++K NPFE+ N+ K +LG+K G P SR +A ++R++TLG E NK + +D
Sbjct: 9 QRKTNPFELKFNKSKHDILGRKKGAQVGAPTASRKRAHEQREQTLGVEYDRKNKISKIVD 68
Query: 386 RRIGEKNNQLSAEDKMIARFAAERVKQHNKKSIYNLADD-----EILTHRGQTLEQIEKF 550
+R+GEK+ + S E+K RF ERVK + + S +NL DD E+LTH+G+ L IEK+
Sbjct: 69 KRLGEKDGK-SEEEKGAMRFTEERVKNYKRASKFNLTDDGDEEEEVLTHKGKALSDIEKY 127
Query: 551 DDPRSDDEDEEGKAYGGLDYDFVAEGHFGGGMLSKTDSKDGAKSHKDLIEQLIAXXXXXX 730
D D D++ + G L + V HFGGG + + S +D+I LIA
Sbjct: 128 DKSMISDSDDDEEP-GNLGSNMVKVAHFGGGEKTAEEHVREKISREDMISNLIAKTKLAR 186
Query: 731 XXXXXXXXQTLDLTEKLXSEWKDL 802
+ +TE L S+++ L
Sbjct: 187 HEKQQQKDELELMTESLDSKYQAL 210
>AF078790-14|AAC26930.1| 335|Caenorhabditis elegans Hypothetical
protein F36H12.3 protein.
Length = 335
Score = 33.9 bits (74), Expect = 0.16
Identities = 39/158 (24%), Positives = 65/158 (41%), Gaps = 3/158 (1%)
Frame = +2
Query: 119 K*NKMAKVKNKRNSGLADKVHSKRKAEINK---KKINPFEVHVNREKIKVLGKKSKHDKG 289
K K VK+ A K SK KA K KK E E+ K KKS+ K
Sbjct: 24 KKKKAGAVKSSTAPAPAPKADSKMKAPEEKEKSKKSEKKEEPKKEEEKKEKSKKSEGKKS 83
Query: 290 LPGVSRAKAVQKRKETLGTEMKLMNKTNTFIDRRIGEKNNQLSAEDKMIARFAAERVKQH 469
+ + ++ KE E K K + D + EK ++ + K + E+ K
Sbjct: 84 DKKEEKKEEKKEEKEDKKEEKKEEKKEDDKKDEKKDEKKDEKEEDKKSEDKKEDEKEKDD 143
Query: 470 NKKSIYNLADDEILTHRGQTLEQIEKFDDPRSDDEDEE 583
+KK + DD+ ++ + EK ++ + D E+++
Sbjct: 144 DKKE--DKKDDKKSDNKDD--KDDEKKEEKKDDKEEKK 177
Score = 31.1 bits (67), Expect = 1.1
Identities = 30/137 (21%), Positives = 58/137 (42%), Gaps = 2/137 (1%)
Frame = +2
Query: 185 KRKAEINKKKINPFEVHVNREKIKVLGKKSKHDKGLPGVSRAKAVQKRKETLGTEMKLMN 364
K K++ ++KK P + +EK K K K + + + +KE E K +
Sbjct: 53 KEKSKKSEKKEEPKKEEEKKEKSKKSEGKKSDKKEEKKEEKKEEKEDKKEEKKEEKKEDD 112
Query: 365 KTNTFIDRRIGEKNNQLSAEDKMIARFAAERVKQHNKK--SIYNLADDEILTHRGQTLEQ 538
K + D + EK +EDK + K+ +KK + DD+ + + +
Sbjct: 113 KKDEKKDEKKDEKEEDKKSEDKKEDEKEKDDDKKEDKKDDKKSDNKDDKDDEKKEEKKDD 172
Query: 539 IEKFDDPRSDDEDEEGK 589
E+ + + +++ EE K
Sbjct: 173 KEEKKEEKKEEKKEEKK 189
>Z46996-1|CAA87099.1| 472|Caenorhabditis elegans Hypothetical
protein C34C12.1 protein.
Length = 472
Score = 32.3 bits (70), Expect = 0.48
Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 1/94 (1%)
Frame = +2
Query: 149 KRNSGLADKVHSKRKAEINKKKINPFEVHVNREKIKVLGKKSKH-DKGLPGVSRAKAVQK 325
K ++D K AEI KKI + EK+ L K K + L + ++ +++
Sbjct: 28 KLTRDVSDAKLLKEDAEIKLKKIRNKLNGEHSEKLGKLNDKYKAVQEELKTMKQSSQLKR 87
Query: 326 RKETLGTEMKLMNKTNTFIDRRIGEKNNQLSAED 427
K L TE + + + +DR++ KN++L D
Sbjct: 88 EKGVLETENRRLETAKSELDRQLLGKNDELRMAD 121
>AF016683-7|AAM97999.1| 609|Caenorhabditis elegans Hypothetical
protein K09F6.9 protein.
Length = 609
Score = 31.9 bits (69), Expect = 0.63
Identities = 31/140 (22%), Positives = 65/140 (46%), Gaps = 6/140 (4%)
Frame = +2
Query: 182 SKRKAEINKKKINPFEVHVNREKIKVLGKKSKH--DKGLPGVSRAKAVQKRKETLGTEMK 355
++ +AE +K+ E +E ++ + K+ + ++ +RAKA++K K L + K
Sbjct: 279 AEARAEALEKEKREQEEKQKKENLERVEKERREHIERHRQAEARAKALEKEKRELEEKQK 338
Query: 356 LMNKTNTFIDRRIG-EKNNQLSAEDKMIARFAAERVKQHNKKSIYNLADDE---ILTHRG 523
N +RR E++ Q A K + + E ++ K+++ E I HR
Sbjct: 339 KENLERVEKERREHIERHRQAEARAKALEKEKRELEEKQKKENLERATQKEREHIERHR- 397
Query: 524 QTLEQIEKFDDPRSDDEDEE 583
+ E+ E+ + D+++E
Sbjct: 398 EAQERHERLQALEAKDKEDE 417
>AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical
protein Y26D4A.9 protein.
Length = 1435
Score = 31.1 bits (67), Expect = 1.1
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Frame = +2
Query: 137 KVKNKRNSGLADKVHSKRKAEINKKKINPFEVHVNREKIKVLGK-KSKHDKGLPGVSRAK 313
+VKN S D ++ RKAE KI + E++K GK K K +K V +AK
Sbjct: 683 EVKNVIRSDYTDCLNKVRKAEDTLAKIEN-KYKKESEEVKKTGKNKDKVEKTKEEVEKAK 741
Query: 314 -AVQKRKETLGTEMKLMNKTNTFIDR 388
QK KE E++ + K +++
Sbjct: 742 EEFQKVKEEFQKEVEKVKKVEKELEK 767
>U41534-7|AAB47599.3| 1743|Caenorhabditis elegans Hypothetical protein
C16A3.3 protein.
Length = 1743
Score = 30.7 bits (66), Expect = 1.5
Identities = 22/106 (20%), Positives = 47/106 (44%)
Frame = +2
Query: 266 KKSKHDKGLPGVSRAKAVQKRKETLGTEMKLMNKTNTFIDRRIGEKNNQLSAEDKMIARF 445
+ S +G+P ++ KET+ E + +N G +N L+A K+ +
Sbjct: 1367 RTSSKSEGVPSKVALLEEERSKETVEAEDPGFDWSNK------GFRNEDLAAVGKLTLKD 1420
Query: 446 AAERVKQHNKKSIYNLADDEILTHRGQTLEQIEKFDDPRSDDEDEE 583
A E ++ ++ + D+E+ E+++ +D D+E+ E
Sbjct: 1421 AEEESEEEEEEDEEEVEDEEVDEDASDEEEEVDGEEDESDDEENIE 1466
>Z72512-6|CAD44143.2| 657|Caenorhabditis elegans Hypothetical
protein R07B5.9 protein.
Length = 657
Score = 30.3 bits (65), Expect = 1.9
Identities = 31/156 (19%), Positives = 66/156 (42%), Gaps = 3/156 (1%)
Frame = +2
Query: 137 KVKNKRNSGLADKVHSKRKAE---INKKKINPFEVHVNREKIKVLGKKSKHDKGLPGVSR 307
K +N+R G ++ + + PFE VN+EK +KS+ K + R
Sbjct: 77 KYRNRRTDGTEEEEEDDDPTDSEPLTTDDEKPFETSVNKEK----NEKSRRGKKVSKKRR 132
Query: 308 AKAVQKRKETLGTEMKLMNKTNTFIDRRIGEKNNQLSAEDKMIARFAAERVKQHNKKSIY 487
+ A +K G + K + G ++ + + ++ E+V++ K
Sbjct: 133 SVAGKKFPPNFGVRDRDEPKKAENSEDGEGLESKPGPSTEMILV----EKVEEEEAKVTV 188
Query: 488 NLADDEILTHRGQTLEQIEKFDDPRSDDEDEEGKAY 595
+ + + + + +EQ + D P+SD++ + +AY
Sbjct: 189 SDINMQASESKIEGIEQTSEVDIPKSDEDHQSTEAY 224
>U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical
protein C33G8.2 protein.
Length = 390
Score = 29.9 bits (64), Expect = 2.6
Identities = 34/158 (21%), Positives = 62/158 (39%), Gaps = 4/158 (2%)
Frame = +2
Query: 128 KMAKVKNKRNSGLADKVHSKRKAEINKKKINPF----EVHVNREKIKVLGKKSKHDKGLP 295
K K K+K+ D+ + +K + KKK + E ++K K K K D
Sbjct: 197 KDKKKKDKKKDDDDDEDENDKKKDKKKKKDDKDDDENEDDKKKDKKKKKDDKEKDDDDEE 256
Query: 296 GVSRAKAVQKRKETLGTEMKLMNKTNTFIDRRIGEKNNQLSAEDKMIARFAAERVKQHNK 475
+ K +K+ + + K K D E N + + K + + K+ +K
Sbjct: 257 EKDKKKKDKKKNDDDEEDKKKDKKKKKDDDDDEDEDNKKKDKKKKKDDKDDEDEEKEKDK 316
Query: 476 KSIYNLADDEILTHRGQTLEQIEKFDDPRSDDEDEEGK 589
K DD+ + ++ +K D +DED++ K
Sbjct: 317 KKKDKKKDDDDDDDEKEKKDKKKKDDKDDDEDEDKDDK 354
>U39850-3|AAM45367.2| 1647|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform b
protein.
Length = 1647
Score = 29.9 bits (64), Expect = 2.6
Identities = 15/58 (25%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +2
Query: 143 KNKRNSGLADKVHSKRKAE-INKKKINPFEVHVNREKIKVLGKKSKHDKGLPGVSRAK 313
K K+ + + +K K + +NK+ + V N + + + K+ H +PG SR+K
Sbjct: 1070 KTKKKDAKSSENRAKEKQKPMNKRPTSSASVDSNDDGVHIPAKRMAHASSVPGPSRSK 1127
>U23139-6|AAK31489.2| 520|Caenorhabditis elegans Hypothetical
protein F13H8.8 protein.
Length = 520
Score = 29.9 bits (64), Expect = 2.6
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +2
Query: 176 VHSKRKAEINKKKINPFEVHVN-REKIKVLGKKSKHDKGLPGVSRAKAVQKRKETLGT 346
VH+ R++E+ KKK++ FE+ ++ E+ K+ + K L S V RKE T
Sbjct: 417 VHAYRRSEVGKKKVDDFEMKISTAEEKKLSCEAPKVSFQLADKSLQLNVYNRKERPNT 474
>Z81114-4|CAB03288.2| 688|Caenorhabditis elegans Hypothetical
protein T04D3.4 protein.
Length = 688
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +2
Query: 140 VKNKRNS-GLADKVHSKRKAEINKKKINPFEVHVNREKIKVLGK 268
V NK S G+ K+H ++N K NP V ++R ++ GK
Sbjct: 547 VANKMESNGIQCKIHVSETGKLNGLKANPSYVFIDRGNTEIRGK 590
>AY652944-1|AAT73711.1| 688|Caenorhabditis elegans guanylate
cyclase-like protein protein.
Length = 688
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +2
Query: 140 VKNKRNS-GLADKVHSKRKAEINKKKINPFEVHVNREKIKVLGK 268
V NK S G+ K+H ++N K NP V ++R ++ GK
Sbjct: 547 VANKMESNGIQCKIHVSETGKLNGLKANPSYVFIDRGNTEIRGK 590
>AC024843-1|AAR12983.3| 193|Caenorhabditis elegans Hypothetical
protein Y61A9LA.12 protein.
Length = 193
Score = 29.5 bits (63), Expect = 3.4
Identities = 34/135 (25%), Positives = 58/135 (42%), Gaps = 2/135 (1%)
Frame = +2
Query: 149 KRNSGLADKVHSKRKAEINKKKINPFEVHVNREKIKVLGKKSKH-DKGLPGVSRAKAVQK 325
K ++D K AEI KKI + EK+ L K K + L + ++ K
Sbjct: 28 KLTRDVSDAKLLKEDAEIKLKKIRNKLNGEHSEKLGKLNDKYKAVQEELKTMKQSWTQLK 87
Query: 326 R-KETLGTEMKLMNKTNTFIDRRIGEKNNQLSAEDKMIARFAAERVKQHNKKSIYNLADD 502
R K L TE + + + +DR++ KN++L D + R + K+ + +
Sbjct: 88 REKGVLETENRRLETAKSGLDRQLLGKNDELRMADVEVEDVKMIRDLKAGKRPPFT-TEF 146
Query: 503 EILTHRGQTLEQIEK 547
+ L R + +IEK
Sbjct: 147 KNLISRSEKFRRIEK 161
>Z83241-3|CAB05818.1| 422|Caenorhabditis elegans Hypothetical
protein T12D8.8 protein.
Length = 422
Score = 29.1 bits (62), Expect = 4.5
Identities = 19/66 (28%), Positives = 35/66 (53%)
Frame = +2
Query: 449 AERVKQHNKKSIYNLADDEILTHRGQTLEQIEKFDDPRSDDEDEEGKAYGGLDYDFVAEG 628
A +++++N+ AD E+ R + E + ++ +E+ + +A G D+DF EG
Sbjct: 229 AHKIQEYNRAVERQKADIELAERRERVRRAQEA--NKKAAEEEAKRQAEQGDDFDF--EG 284
Query: 629 HFGGGM 646
F GGM
Sbjct: 285 GFPGGM 290
>Z81120-9|CAB03349.1| 422|Caenorhabditis elegans Hypothetical
protein T12D8.8 protein.
Length = 422
Score = 29.1 bits (62), Expect = 4.5
Identities = 19/66 (28%), Positives = 35/66 (53%)
Frame = +2
Query: 449 AERVKQHNKKSIYNLADDEILTHRGQTLEQIEKFDDPRSDDEDEEGKAYGGLDYDFVAEG 628
A +++++N+ AD E+ R + E + ++ +E+ + +A G D+DF EG
Sbjct: 229 AHKIQEYNRAVERQKADIELAERRERVRRAQEA--NKKAAEEEAKRQAEQGDDFDF--EG 284
Query: 629 HFGGGM 646
F GGM
Sbjct: 285 GFPGGM 290
>Z27081-3|CAH19085.1| 869|Caenorhabditis elegans Hypothetical
protein M01A8.2b protein.
Length = 869
Score = 29.1 bits (62), Expect = 4.5
Identities = 26/114 (22%), Positives = 47/114 (41%), Gaps = 2/114 (1%)
Frame = +2
Query: 173 KVHSKRKAEINKKKINPFEVHVNREKIKVLGKKSKHDKGLPGV-SRAKAVQKRKETLGTE 349
K H + AE NK+ FE R + +V ++H K + + + +K+ E L +
Sbjct: 559 KTHETQIAEKNKEFERNFEEERARREAEVCAMNNRHQKVVACLDEKISEAEKQCEQLNVD 618
Query: 350 MKLMNKT-NTFIDRRIGEKNNQLSAEDKMIARFAAERVKQHNKKSIYNLADDEI 508
K++ D R ++S+ + +AE + K +L DEI
Sbjct: 619 KKVLQAALANDCDHRNQMLTKEISSLQTALEMKSAEMKELRQKNQNLSLQVDEI 672
>Z27081-2|CAA81607.2| 937|Caenorhabditis elegans Hypothetical
protein M01A8.2a protein.
Length = 937
Score = 29.1 bits (62), Expect = 4.5
Identities = 26/114 (22%), Positives = 47/114 (41%), Gaps = 2/114 (1%)
Frame = +2
Query: 173 KVHSKRKAEINKKKINPFEVHVNREKIKVLGKKSKHDKGLPGV-SRAKAVQKRKETLGTE 349
K H + AE NK+ FE R + +V ++H K + + + +K+ E L +
Sbjct: 627 KTHETQIAEKNKEFERNFEEERARREAEVCAMNNRHQKVVACLDEKISEAEKQCEQLNVD 686
Query: 350 MKLMNKT-NTFIDRRIGEKNNQLSAEDKMIARFAAERVKQHNKKSIYNLADDEI 508
K++ D R ++S+ + +AE + K +L DEI
Sbjct: 687 KKVLQAALANDCDHRNQMLTKEISSLQTALEMKSAEMKELRQKNQNLSLQVDEI 740
>AL032657-9|CAA21736.1| 829|Caenorhabditis elegans Hypothetical
protein Y47H9C.9 protein.
Length = 829
Score = 29.1 bits (62), Expect = 4.5
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 2/95 (2%)
Frame = +2
Query: 149 KRNSGLADKVHSKRKAEINKKKINPFEVHVNREKIKVLGKKSKH-DKGLPGVSRAKAVQK 325
K ++D K AEI KKI + EK+ L K K + L + ++ K
Sbjct: 22 KLTRDVSDAKLLKEDAEIKLKKIRDKLNGEHSEKLGKLNDKYKAVQEELKTMKQSWTQLK 81
Query: 326 R-KETLGTEMKLMNKTNTFIDRRIGEKNNQLSAED 427
R K L TE + + +DR++ KN++L D
Sbjct: 82 REKGVLETENRRLETAKRELDRQLSGKNDELRMAD 116
>Z93385-8|CAN86626.1| 560|Caenorhabditis elegans Hypothetical
protein M01E5.3c protein.
Length = 560
Score = 28.7 bits (61), Expect = 5.9
Identities = 18/81 (22%), Positives = 38/81 (46%)
Frame = +2
Query: 386 RRIGEKNNQLSAEDKMIARFAAERVKQHNKKSIYNLADDEILTHRGQTLEQIEKFDDPRS 565
+R G+ +N + +++ + AE+ +Q + + ++D E + Q D
Sbjct: 478 QRNGDDSNDSTDREEI---YDAEQQRQEALRDLVAVSDPEAQPNFAPVEAQAVDLDMLEE 534
Query: 566 DDEDEEGKAYGGLDYDFVAEG 628
+ ED+E GG+D F+ +G
Sbjct: 535 EGEDDEVMEVGGVDGQFMMDG 555
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 28.7 bits (61), Expect = 5.9
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +2
Query: 170 DKVHSKRKAEINKKKINPFEVHVNREKIKVLGKKSK-HDKGLPGVSRAKAVQKRKETLG 343
DKV + R+ E++ KKI+P R + K++ K K GL S + +++ ET G
Sbjct: 100 DKVLNNREHELDGKKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYG 158
>U88172-8|AAB42258.1| 312|Caenorhabditis elegans Hypothetical
protein ZK354.3 protein.
Length = 312
Score = 28.7 bits (61), Expect = 5.9
Identities = 18/97 (18%), Positives = 42/97 (43%)
Frame = +2
Query: 293 PGVSRAKAVQKRKETLGTEMKLMNKTNTFIDRRIGEKNNQLSAEDKMIARFAAERVKQHN 472
P K +K++E E K + + + +K+ + +DK+ + E +
Sbjct: 64 PKGEEKKEEEKKEEEKKEEEKKADDEKKKTEEKDDKKSKKTEEKDKLSVKKTQETKSERK 123
Query: 473 KKSIYNLADDEILTHRGQTLEQIEKFDDPRSDDEDEE 583
K DD+ ++ ++ ++ +K D+ + EDE+
Sbjct: 124 DKKDERKEDDKKEENKEKSKDEEKKKDEVKDKKEDEK 160
>U50193-8|AAL11478.2| 394|Caenorhabditis elegans Hypothetical
protein ZK328.6 protein.
Length = 394
Score = 28.7 bits (61), Expect = 5.9
Identities = 14/64 (21%), Positives = 34/64 (53%), Gaps = 1/64 (1%)
Frame = +2
Query: 245 EKIKVLGKKSKHDKGLPGVSRAKAVQKRKET-LGTEMKLMNKTNTFIDRRIGEKNNQLSA 421
+ I++ + H G+P + K ++K+KET + TE ++ K + +++ +K ++
Sbjct: 287 KSIQMTASQGTHVDGVPPTKKKKVIRKKKETEVVTEEGVLPKPKKKVVKKVVKKKKPIAF 346
Query: 422 EDKM 433
K+
Sbjct: 347 IKKL 350
>AF016427-8|AAB65355.1| 513|Caenorhabditis elegans Hypothetical
protein F32D1.9 protein.
Length = 513
Score = 28.7 bits (61), Expect = 5.9
Identities = 12/40 (30%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
Frame = +2
Query: 470 NKKSIYNLADDE--ILTHRGQTLEQIEKFDDPRSDDEDEE 583
N +++ N+ DD I + G+ +++E+ D+P +DD+D +
Sbjct: 54 NLENLENVLDDSEIIAENSGEADQEVEEEDNPFADDDDSD 93
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 28.7 bits (61), Expect = 5.9
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +2
Query: 170 DKVHSKRKAEINKKKINPFEVHVNREKIKVLGKKSK-HDKGLPGVSRAKAVQKRKETLG 343
DKV + R+ E++ KKI+P R + K++ K K GL S + +++ ET G
Sbjct: 100 DKVLNNREHELDGKKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQYFETYG 158
>AF000198-2|AAB53055.2| 748|Caenorhabditis elegans Hypothetical
protein T28F2.4a protein.
Length = 748
Score = 25.8 bits (54), Expect(2) = 6.5
Identities = 30/146 (20%), Positives = 55/146 (37%), Gaps = 1/146 (0%)
Frame = +2
Query: 128 KMAKVKNKRNSGLADKVHSKRKAEINKKKINPFEVHVNREKIKVLGKKSKHDKGLPGVSR 307
K+ KVK + D+V S V V +K++ K + K
Sbjct: 53 KLEKVKRIHDGLNIDRVLSHGPVPKQNGGTKRKHVEVTTQKLENKKPKVEVKKEDEKSKN 112
Query: 308 AKAVQKRKETLGTEMKLMNKTNTFIDRRIGEKNNQLSAEDKMIARFAAERVKQHNKKSIY 487
K + K T + + ++ F++ E L + + IA F V + + + +
Sbjct: 113 KKMKNQNKHTALVQNETSTRSTYFVEEPDNENKVTLISNGREIA-FKKTEVVESDDEQMI 171
Query: 488 NLADDEILTHRGQT-LEQIEKFDDPR 562
L DE L +T +++ E DP+
Sbjct: 172 GLDSDEELEDEDETDIDEDEMMIDPK 197
Score = 21.0 bits (42), Expect(2) = 6.5
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = +2
Query: 542 EKFDDPRSDDEDEE 583
E+F+D +DE+EE
Sbjct: 222 EEFEDEEFEDEEEE 235
>Z68213-1|CAA92435.2| 487|Caenorhabditis elegans Hypothetical
protein C01F6.2 protein.
Length = 487
Score = 28.3 bits (60), Expect = 7.8
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Frame = +2
Query: 383 DRRIGEKNNQLSA---EDKMIARFAAERVKQHNKKSIYNLADDEI 508
D IGEK +++ +DK + E++K+ KKS + DE+
Sbjct: 179 DHCIGEKGKKINGSLEKDKKVKESGKEKIKKETKKSPQTMTLDEV 223
>U39850-5|AAM45368.1| 670|Caenorhabditis elegans Polyq (poly
glutamine tract) toxicityenhancer protein 1, isoform c
protein.
Length = 670
Score = 28.3 bits (60), Expect = 7.8
Identities = 12/55 (21%), Positives = 29/55 (52%)
Frame = +2
Query: 149 KRNSGLADKVHSKRKAEINKKKINPFEVHVNREKIKVLGKKSKHDKGLPGVSRAK 313
K+++ ++ +++ +NK+ + V N + + + K+ H +PG SR+K
Sbjct: 96 KKDAKSSENRAKEKQKPMNKRPTSSASVDSNDDGVHIPAKRMAHASSVPGPSRSK 150
>U28991-2|AAK68307.1| 679|Caenorhabditis elegans Kinesin-associated
protein protein1, isoform b protein.
Length = 679
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +2
Query: 464 QHNKKSIYNLADDEILTHRGQTLEQIEKFDDPRSDDEDEEGKAYGGLDYDFVAEG 628
+H+K+ +A + H Q LE +E+ D D +DE+ A L +D +G
Sbjct: 619 EHSKEWAKRIAGERFKWHNAQWLEMVERDDSEFVDYDDEDFGA--DLKFDHYDDG 671
>U28991-1|AAM22059.1| 696|Caenorhabditis elegans Kinesin-associated
protein protein1, isoform a protein.
Length = 696
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +2
Query: 464 QHNKKSIYNLADDEILTHRGQTLEQIEKFDDPRSDDEDEEGKAYGGLDYDFVAEG 628
+H+K+ +A + H Q LE +E+ D D +DE+ A L +D +G
Sbjct: 636 EHSKEWAKRIAGERFKWHNAQWLEMVERDDSEFVDYDDEDFGA--DLKFDHYDDG 688
>AL132948-22|CAD31825.2| 1408|Caenorhabditis elegans Hypothetical
protein Y39B6A.30 protein.
Length = 1408
Score = 28.3 bits (60), Expect = 7.8
Identities = 26/111 (23%), Positives = 48/111 (43%), Gaps = 1/111 (0%)
Frame = +2
Query: 137 KVKNKRNSGLADKVHSKRKAEINKKKINPFEVHVNREKIKVLGKKSKHDKGLPGVSRAKA 316
KV+ +RN + KAE K KI +V +KIK ++ + ++ AK
Sbjct: 952 KVEKERNKEKVKAEEERLKAEEEKVKIEKEKVKAEEQKIKAAEEERRKER----AEDAKK 1007
Query: 317 VQKRKETLG-TEMKLMNKTNTFIDRRIGEKNNQLSAEDKMIARFAAERVKQ 466
V++ +E + K+ K + RR K ++ E + + E+ K+
Sbjct: 1008 VKEGQEKIAILNAKVQEKEDKSEARR---KQKEMDNEAEKLLNVEKEKEKR 1055
>AF149287-1|AAF99086.1| 696|Caenorhabditis elegans KAP protein.
Length = 696
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +2
Query: 464 QHNKKSIYNLADDEILTHRGQTLEQIEKFDDPRSDDEDEEGKAYGGLDYDFVAEG 628
+H+K+ +A + H Q LE +E+ D D +DE+ A L +D +G
Sbjct: 636 EHSKEWAKRIAGERFKWHNAQWLEMVERDDSEFVDYDDEDFGA--DLKFDHYDDG 688
>AF000299-1|AAC47980.1| 210|Caenorhabditis elegans Hypothetical
protein E03H12.5 protein.
Length = 210
Score = 28.3 bits (60), Expect = 7.8
Identities = 22/90 (24%), Positives = 40/90 (44%)
Frame = +2
Query: 314 AVQKRKETLGTEMKLMNKTNTFIDRRIGEKNNQLSAEDKMIARFAAERVKQHNKKSIYNL 493
A +K+ E + K K +++ K ++ S++ K + E+ K +KK
Sbjct: 122 ADEKKDEEKKDDKKDEKKDEKKDEKKEKSKKSKKSSKSKKSKKSKREK-KDEDKKEDDKK 180
Query: 494 ADDEILTHRGQTLEQIEKFDDPRSDDEDEE 583
DD+ + + EK DD + DDE +E
Sbjct: 181 EDDKKDDKKEDDKKDDEKKDDDKKDDEKKE 210
>AB017107-1|BAA88838.1| 679|Caenorhabditis elegans Kinesin
associated protein kap-1 protein.
Length = 679
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = +2
Query: 464 QHNKKSIYNLADDEILTHRGQTLEQIEKFDDPRSDDEDEEGKAYGGLDYDFVAEG 628
+H+K+ +A + H Q LE +E+ D D +DE+ A L +D +G
Sbjct: 619 EHSKEWAKRIAGERFKWHNAQWLEMVERDDSEFVDYDDEDFGA--DLKFDHYDDG 671
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,845,368
Number of Sequences: 27780
Number of extensions: 305055
Number of successful extensions: 1181
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1109
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1172
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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