Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_P18
(931 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transpo... 72 1e-13
SPAPB24D3.09c |pdr1||ABC transporter Pdr1|Schizosaccharomyces po... 60 6e-10
SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase Abc4|... 42 9e-05
SPCC737.09c |hmt1|SPCC74.08c|ATP-binding cassette-type vacuolar ... 40 7e-04
SPCC663.03 |pmd1||leptomycin efflux transporter Pmd1|Schizosacch... 39 0.001
SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces pombe... 38 0.002
SPAC20G4.01 ||SPAC22F8.13|CCR4-Not complex subunit Caf16|Schizos... 38 0.002
SPCC417.08 |tef3||translation elongation factor eEF3|Schizosacch... 37 0.005
SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces po... 36 0.008
SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1 |Schizo... 36 0.011
SPBC16H5.08c |||ribosome biogenesis ATPase, Arb family |Schizosa... 35 0.014
SPAC222.05c |mss1||COX RNA-associated protein|Schizosaccharomyce... 35 0.014
SPAC15A10.01 |atm1|SPAC8C9.18|ABC family iron transporter Atm1|S... 34 0.033
SPAC323.04 |||mitochondrial ATPase |Schizosaccharomyces pombe|ch... 33 0.076
SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase Abc... 32 0.10
SPAC821.06 |spn2||septin Spn2|Schizosaccharomyces pombe|chr 1|||... 32 0.13
SPBC29A3.09c |||AAA family ATPase Gcn20 |Schizosaccharomyces pom... 31 0.18
SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein Bms1|Schizosacc... 31 0.18
SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces ... 31 0.31
SPBC9B6.09c |mdl1||mitochondrial peptide-transporting ATPase|Sch... 31 0.31
SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1 |Sc... 29 0.93
SPAC222.14c |||GTP binding protein Sey1 |Schizosaccharomyces pom... 29 0.93
SPCC825.01 |||ribosome biogenesis ATPase, Arb family |Schizosacc... 28 1.6
SPAC222.08c |||imidazoleglycerol-phosphate synthase |Schizosacch... 28 2.2
SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting pro... 27 2.8
SPAC14C4.13 |rad17||RFC related checkpoint protein Rad17|Schizos... 27 2.8
SPBC1539.03c |||argininosuccinate lyase|Schizosaccharomyces pomb... 27 3.8
SPAC1A6.05c |||triacylglycerol lipase|Schizosaccharomyces pombe|... 27 5.0
SPAC22H10.05c |||mRNA cleavage and polyadenylation specificity f... 27 5.0
SPAP8A3.11c |||mitochondrial GTPase Mtg2|Schizosaccharomyces pom... 27 5.0
SPBC1198.05 |||guanylate kinase |Schizosaccharomyces pombe|chr 2... 27 5.0
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 26 6.6
SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr 1||... 26 6.6
SPCC895.09c |ucp12||ATP-dependent RNA helicase Ucp1 |Schizosacch... 26 6.6
SPCC553.03 |pex1||AAA family ATPase Pex1 |Schizosaccharomyces po... 26 6.6
SPCC1906.02c |||CUE domain protein Cue3 |Schizosaccharomyces pom... 26 8.7
SPAC6F12.07 |tom20||mitochondrial TOM complex subunit Tom20|Schi... 26 8.7
SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomy... 26 8.7
SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78 |Schizosacch... 26 8.7
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 26 8.7
SPAC20H4.07 |rhp57||RecA family ATPase Rhp57|Schizosaccharomyces... 26 8.7
>SPCC18B5.01c |bfr1|hba2, SPCPJ732.04c|brefeldin A efflux transporter
Bfr1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1530
Score = 71.7 bits (168), Expect = 1e-13
Identities = 43/130 (33%), Positives = 75/130 (57%), Gaps = 1/130 (0%)
Frame = +2
Query: 329 AFTDLTYKVQEGRKSNVKTILKSVSGRLRSGELTAIMGPSGAGKSTLLNILTGYKTSG-M 505
++ +L Y +Q K + +L V G + G+LTA+MG SGAGK+TLLN+L +G +
Sbjct: 883 SWRNLNYDIQI--KGEHRRLLNGVQGFVVPGKLTALMGESGAGKTTLLNVLAQRVDTGVV 940
Query: 506 EGSITVNGMERNLSSFRKLSCYIMQDNQLHGNLTVEEAMGVATSLKLPSSTTRDEKEMLT 685
G + VNG + S+F++ + Y+ Q + G TV EA+ + +L+ P+S EK
Sbjct: 941 TGDMLVNGRGLD-STFQRRTGYVQQQDVHIGESTVREALRFSAALRQPASVPLSEKYEYV 999
Query: 686 ETILHTPQLD 715
E+++ +++
Sbjct: 1000 ESVIKLLEME 1009
Score = 34.3 bits (75), Expect = 0.025
Identities = 24/96 (25%), Positives = 44/96 (45%), Gaps = 4/96 (4%)
Frame = +2
Query: 380 KTILKSVSGRLRSGELTAIMGPSGAGKSTLLNILTG--YKTSGMEGSITVNGMER-NLSS 550
K IL +GEL ++G G+G ST L +T +EG+ +G+++ ++
Sbjct: 174 KAILSHCHALANAGELVMVLGQPGSGCSTFLRSVTSDTVHYKRVEGTTHYDGIDKADMKK 233
Query: 551 FRKLSCYIMQDNQLH-GNLTVEEAMGVATSLKLPSS 655
F +N +H +LT E + A + P++
Sbjct: 234 FFPGDLLYSGENDVHFPSLTTAETLDFAAKCRTPNN 269
>SPAPB24D3.09c |pdr1||ABC transporter Pdr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1396
Score = 59.7 bits (138), Expect = 6e-10
Identities = 39/125 (31%), Positives = 68/125 (54%), Gaps = 1/125 (0%)
Frame = +2
Query: 326 LAFTDLTYKVQEGRKSNVKTILKSVSGRLRSGELTAIMGPSGAGKSTLLNILTGYKTSG- 502
L + DL + V K++ K IL +VSG L+ LTA++G + +GKS LL IL+ +G
Sbjct: 758 LCWRDLNFTVVT--KTSKKQILTNVSGYLKKNTLTALLGENKSGKSVLLRILSQRGIAGS 815
Query: 503 MEGSITVNGMERNLSSFRKLSCYIMQDNQLHGNLTVEEAMGVATSLKLPSSTTRDEKEML 682
+EG IT++G+ +N + RK Y+ ++ TV E + + +L+ + E+
Sbjct: 816 VEGEITLSGL-KNPKNLRKRIGYVRKNPLFISEYTVRETLRLHAALRQSKQRSLSEQYAY 874
Query: 683 TETIL 697
E ++
Sbjct: 875 VEYVI 879
Score = 43.2 bits (97), Expect = 5e-05
Identities = 27/102 (26%), Positives = 49/102 (48%), Gaps = 4/102 (3%)
Frame = +2
Query: 362 GRKSNVKTILKSVSGRLRSGELTAIMGPSGAGKSTLLNILTGY--KTSGMEGSITVNGME 535
G K ++ ++K G L+ G ++G G+G STLL L G + + GS+ +G++
Sbjct: 83 GPKRDIIPLVKGFDGYLQPGSSLLVLGHEGSGGSTLLKALCGIVEENERLNGSLHYDGLD 142
Query: 536 RNL--SSFRKLSCYIMQDNQLHGNLTVEEAMGVATSLKLPSS 655
+ S F+ Y + + +TV + S +LP+S
Sbjct: 143 YKIAHSQFKADLSYCGEGHSKVATITVRRLLEFVCSCRLPAS 184
>SPAC30.04c |abc4||glutathione S-conjugate-exporting ATPase
Abc4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1469
Score = 42.3 bits (95), Expect = 9e-05
Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Frame = +2
Query: 383 TILKSVSGRLRSGELTAIMGPSGAGKSTLLNILTGYKTSGMEGSITVNGMER---NLSSF 553
TILK V+ + E A++G +G+GKSTL L + T + G I +NG E NL++
Sbjct: 1227 TILKDVNLHINPSEKVAVVGRTGSGKSTLGLTLLRF-THRISGEIYINGRETQSVNLNAL 1285
Query: 554 RKLSCYIMQD 583
R+ +I QD
Sbjct: 1286 RQRISFIPQD 1295
Score = 28.7 bits (61), Expect = 1.2
Identities = 10/22 (45%), Positives = 19/22 (86%)
Frame = +2
Query: 422 ELTAIMGPSGAGKSTLLNILTG 487
+L+ ++GP+G+GKS+L++ L G
Sbjct: 642 KLSIVIGPTGSGKSSLISALLG 663
>SPCC737.09c |hmt1|SPCC74.08c|ATP-binding cassette-type vacuolar
membrane transporter Hmt1|Schizosaccharomyces pombe|chr
3|||Manual
Length = 830
Score = 39.5 bits (88), Expect = 7e-04
Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Frame = +2
Query: 380 KTILKSVSGRLRSGELTAIMGPSGAGKSTLLNILTGYKTSGMEGSITVNGME-RN--LSS 550
K +L ++ + G++ A++G SG GKST++ IL + GSIT++ + RN LSS
Sbjct: 597 KPVLSDINFVAQPGKVIALVGESGGGKSTIMRILLRFFDVN-SGSITIDDQDIRNVTLSS 655
Query: 551 FRKLSCYIMQDNQL 592
R + QD+ L
Sbjct: 656 LRSSIGVVPQDSTL 669
Score = 27.1 bits (57), Expect = 3.8
Identities = 10/24 (41%), Positives = 19/24 (79%)
Frame = +3
Query: 744 LSGGQKKRLSIALELVNNPPIMXL 815
LSGG+K+R+++A ++ +P I+ L
Sbjct: 721 LSGGEKQRVAVARAILKDPSIILL 744
>SPCC663.03 |pmd1||leptomycin efflux transporter
Pmd1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1362
Score = 38.7 bits (86), Expect = 0.001
Identities = 25/111 (22%), Positives = 54/111 (48%), Gaps = 4/111 (3%)
Frame = +2
Query: 386 ILKSVSGRLRSGELTAIMGPSGAGKSTLLNILTGYKTSGMEGSITVNGM---ERNLSSFR 556
+L+ ++ ++ G+ A +G SG GKST + ++ + G++ V+G+ + N++ +R
Sbjct: 1136 VLRGLNLTVKPGQFVAFVGSSGCGKSTTIGLIERFYDCD-NGAVLVDGVNVRDYNINDYR 1194
Query: 557 KLSCYIMQDNQLH-GNLTVEEAMGVATSLKLPSSTTRDEKEMLTETILHTP 706
K + Q+ L+ G + +G + + +K + E IL P
Sbjct: 1195 KQIALVSQEPTLYQGTVRENIVLGASKDVSEEEMIEACKKANIHEFILGLP 1245
Score = 35.1 bits (77), Expect = 0.014
Identities = 15/26 (57%), Positives = 21/26 (80%)
Frame = +3
Query: 738 SNLSGGQKKRLSIALELVNNPPIMXL 815
S+LSGGQK+R++IA L+ NP I+ L
Sbjct: 1257 SSLSGGQKQRIAIARALIRNPKILLL 1282
Score = 34.3 bits (75), Expect = 0.025
Identities = 21/80 (26%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Frame = +2
Query: 416 SGELTAIMGPSGAGKSTLLNILTGYKTSGMEGSITVNGME---RNLSSFRKLSCYIMQDN 586
SG++TA++G SG+GKST++ ++ + + G + ++G + N++S R + Q+
Sbjct: 447 SGKITALVGASGSGKSTIIGLVERF-YDPIGGQVFLDGKDLRTLNVASLRNQISLVQQEP 505
Query: 587 QLHGNLTVEE-AMGVATSLK 643
L E G+ ++K
Sbjct: 506 VLFATTVFENITYGLPDTIK 525
Score = 29.5 bits (63), Expect = 0.71
Identities = 11/24 (45%), Positives = 20/24 (83%)
Frame = +3
Query: 744 LSGGQKKRLSIALELVNNPPIMXL 815
+SGGQK+R++IA ++++P I+ L
Sbjct: 568 MSGGQKQRIAIARAVISDPKILLL 591
>SPBC359.05 |abc3||ABC transporter Abc3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1465
Score = 38.3 bits (85), Expect = 0.002
Identities = 21/47 (44%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +2
Query: 368 KSNVKTILKSVSGRLRSGELTAIMGPSGAGKSTLLNILTG--YKTSG 502
K V L+ ++ ++GELT I G GAGKS+LL G YK SG
Sbjct: 590 KQQVTPTLRQINFVAKNGELTCIFGKVGAGKSSLLEACMGNMYKNSG 636
>SPAC20G4.01 ||SPAC22F8.13|CCR4-Not complex subunit
Caf16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 280
Score = 38.3 bits (85), Expect = 0.002
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Frame = +2
Query: 389 LKSVSGRLRSGELTAIMGPSGAGKSTLLNILTGYKTSGMEGSITVNGME---RNLSSFRK 559
L V+ L G T ++G +GAGKSTLL +L+G K+ G I+V G + + S+F
Sbjct: 20 LDHVTLDLPKGSRTLLVGANGAGKSTLLKLLSG-KSLAKAGHISVGGKDPFRESSSAFVY 78
Query: 560 LSCYIMQDNQLHGNLTV 610
L + + +H +++V
Sbjct: 79 LGTEWVNNPVIHRDMSV 95
>SPCC417.08 |tef3||translation elongation factor
eEF3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1047
Score = 36.7 bits (81), Expect = 0.005
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = +2
Query: 380 KTILKSVSGRLRSGELTAIMGPSGAGKSTLLNILTG 487
K L +S ++ A++GP+GAGKSTL+ +LTG
Sbjct: 687 KPQLNDISFQVSLSSRIAVIGPNGAGKSTLIKVLTG 722
Score = 31.9 bits (69), Expect = 0.13
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +2
Query: 380 KTILKSVSGRLRSGELTAIMGPSGAGKSTLLNILTGYKTSG 502
K +L RL+ G + GP+G+GKSTL+ + + G
Sbjct: 447 KILLNRTRLRLKRGRRYGLCGPNGSGKSTLMRAIVNGQVEG 487
>SPAC3C7.08c |elf1||AAA family ATPase ELf1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1057
Score = 35.9 bits (79), Expect = 0.008
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = +2
Query: 326 LAFTDLTYKVQEGRKSNVKTILKSVSGRLRSGELTAIMGPSGAGKSTLLNILTG 487
L T+ +Y +K ++ + +S R AI+GP+GAGKSTL+ +L G
Sbjct: 692 LKMTNASYTYPNAKKKSLDNVTVGLSLSSR----VAILGPNGAGKSTLIKVLIG 741
Score = 29.5 bits (63), Expect = 0.71
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +3
Query: 738 SNLSGGQKKRLSIALELVNNPPIMXL 815
S+LSGGQK ++ IA L NNP ++ L
Sbjct: 909 SSLSGGQKVKVVIAACLWNNPQLLVL 934
Score = 27.9 bits (59), Expect = 2.2
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +2
Query: 380 KTILKSVSGRLRSGELTAIMGPSGAGKSTLLNILTGYK 493
+ +L + L G ++G +G GKSTLL + YK
Sbjct: 457 RLLLSHTNLHLYRGHRYGVVGHNGCGKSTLLRAIGDYK 494
>SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1336
Score = 35.5 bits (78), Expect = 0.011
Identities = 18/42 (42%), Positives = 29/42 (69%)
Frame = +2
Query: 365 RKSNVKTILKSVSGRLRSGELTAIMGPSGAGKSTLLNILTGY 490
R N+ +++ +VS + GEL I+GPSG+GKST +++L Y
Sbjct: 445 RDENLFSLI-NVSVFIPFGELVHIIGPSGSGKSTFISLLLRY 485
Score = 33.1 bits (72), Expect = 0.057
Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 2/114 (1%)
Frame = +2
Query: 389 LKSVSGRLRSGELTAIMGPSGAGKSTLLNILTGYKTSGMEGSITVNGME-RNLSSFRKLS 565
L +VS + + E AI+G SG+GKSTL+ +L KT E I ++G N+ + L
Sbjct: 1118 LNNVSLSIEAREKVAIVGISGSGKSTLVELLR--KTYPSE-DIYIDGYPLTNIDTNWLLK 1174
Query: 566 CYIMQDNQLH-GNLTVEEAMGVATSLKLPSSTTRDEKEMLTETILHTPQLDGTP 724
+ D + H T+ E++ + S +K +TE I + P TP
Sbjct: 1175 KVAIVDQKPHLLGSTILESLLYGVDRDINSVMDALDKTYMTEVIQNLPNGLDTP 1228
Score = 28.3 bits (60), Expect = 1.6
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +3
Query: 735 TSNLSGGQKKRLSIALELVNNPPIMXL 815
+ N SGGQ +RL+ A L+ NP ++ L
Sbjct: 1233 SKNFSGGQIQRLAFARALLRNPRLLIL 1259
>SPBC16H5.08c |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 618
Score = 35.1 bits (77), Expect = 0.014
Identities = 28/111 (25%), Positives = 52/111 (46%), Gaps = 4/111 (3%)
Frame = +2
Query: 200 SNLAGPVDSKPILFDRKGSVKVTITPTQHKTLS----HLPXRQPVDLAFTDLTYKVQEGR 367
+NL SK + D+ + + P + S + P +AF D+ + +G
Sbjct: 342 ANLVRQAKSKQKIIDKMEAAGLVEKPEPPRQFSFEFDEVRKLPPPIIAFNDVAFSY-DGN 400
Query: 368 KSNVKTILKSVSGRLRSGELTAIMGPSGAGKSTLLNILTGYKTSGMEGSIT 520
+ + + +S + AI+G +G GKSTLLN++TG +EG+++
Sbjct: 401 LDHA--LYRDLSFGIDMDSRVAIVGKNGTGKSTLLNLITGLLIP-IEGNVS 448
>SPAC222.05c |mss1||COX RNA-associated protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 496
Score = 35.1 bits (77), Expect = 0.014
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +2
Query: 410 LRSGELTAIMGPSGAGKSTLLNILTGYKTS 499
LR G AI+GPS AGKS+L+N+L + S
Sbjct: 236 LRKGINVAILGPSNAGKSSLINLLANRRIS 265
>SPAC15A10.01 |atm1|SPAC8C9.18|ABC family iron transporter
Atm1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 693
Score = 33.9 bits (74), Expect = 0.033
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Frame = +2
Query: 380 KTILKSVSGRLRSGELTAIMGPSGAGKSTLLNILTGYKTSGMEGSITVNGM---ERNLSS 550
+ IL S + +G A +G SG GKST+L +L + + G I ++ + L+S
Sbjct: 456 RPILNGCSFNIPAGAKVAFVGASGCGKSTILRLLFRFYDTD-SGKILIDNQRLDQITLNS 514
Query: 551 FRKLSCYIMQDNQL 592
RK + QD L
Sbjct: 515 LRKAIGVVPQDTPL 528
Score = 27.5 bits (58), Expect = 2.8
Identities = 10/22 (45%), Positives = 18/22 (81%)
Frame = +3
Query: 744 LSGGQKKRLSIALELVNNPPIM 809
+SGG+K+RL+++ L+ NP I+
Sbjct: 580 ISGGEKQRLAVSRLLLKNPEIL 601
>SPAC323.04 |||mitochondrial ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 487
Score = 32.7 bits (71), Expect = 0.076
Identities = 19/72 (26%), Positives = 37/72 (51%)
Frame = +2
Query: 380 KTILKSVSGRLRSGELTAIMGPSGAGKSTLLNILTGYKTSGMEGSITVNGMERNLSSFRK 559
+ +L ++ +R GE A+ G +G+GK+TLL + G +I G +++
Sbjct: 277 RKVLSDINWTIREGERWALTGSNGSGKTTLLAYVVGDHPKLFASNIKFFG--KSIGPGTG 334
Query: 560 LSCYIMQDNQLH 595
+S + +Q+N H
Sbjct: 335 ISIFDIQENIGH 346
>SPAC3F10.11c |abc2||glutathione S-conjugate-exporting ATPase
Abc2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1463
Score = 32.3 bits (70), Expect = 0.10
Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Frame = +2
Query: 368 KSNVKTILKSVSGRLRSGELTAIMGPSGAGKSTLLNILTGY--KTSGMEGSITVNGMERN 541
+ N+ +L +S ++ E I+G +GAGKSTL L TSG +N
Sbjct: 1234 RENLPLVLNDISVNIKPQEKIGIVGRTGAGKSTLTLALFRLIEPTSGDIQLDDINITSIG 1293
Query: 542 LSSFRKLSCYIMQDNQ 589
L R I Q+NQ
Sbjct: 1294 LHDLRSRLAIIPQENQ 1309
Score = 28.3 bits (60), Expect = 1.6
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +2
Query: 389 LKSVSGRLRSGELTAIMGPSGAGKSTLLNILTG 487
L+ + R GEL I+G G GKS+LL G
Sbjct: 599 LRDIDFVARRGELCCIVGKVGMGKSSLLEACLG 631
Score = 25.8 bits (54), Expect = 8.7
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +3
Query: 375 MSKRSSSLFRVGSVPASSRPSWV 443
M K S S+FR GS+ +++ W+
Sbjct: 633 MQKHSGSVFRCGSIAYAAQQPWI 655
>SPAC821.06 |spn2||septin Spn2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 331
Score = 31.9 bits (69), Expect = 0.13
Identities = 16/64 (25%), Positives = 33/64 (51%)
Frame = +2
Query: 434 IMGPSGAGKSTLLNILTGYKTSGMEGSITVNGMERNLSSFRKLSCYIMQDNQLHGNLTVE 613
++GPSG+GKSTL+N L +G + R + ++ ++++N++ L +
Sbjct: 37 VVGPSGSGKSTLINTLFSAHLMDSKGRLDYQAPYRQTTEIH-VTSQVVRENRVQLQLNLI 95
Query: 614 EAMG 625
+ G
Sbjct: 96 DTPG 99
>SPBC29A3.09c |||AAA family ATPase Gcn20 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 736
Score = 31.5 bits (68), Expect = 0.18
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Frame = +2
Query: 386 ILKSVSGRLRSGELTAIMGPSGAGKSTLLNILTG--YKTSGM 505
ILK V ++ ++GP+GAGKST+L +L + TSG+
Sbjct: 533 ILKHVDIDVQMDSRIGVVGPNGAGKSTMLKLLIEQLHPTSGI 574
Score = 25.8 bits (54), Expect = 8.7
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +2
Query: 386 ILKSVSGRLRSGELTAIMGPSGAGKSTLLNILT 484
IL S L G + G +G GKSTLL L+
Sbjct: 197 ILTGASLTLAQGRRYGLTGRNGIGKSTLLRALS 229
Score = 25.8 bits (54), Expect = 8.7
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 744 LSGGQKKRLSIALELVNNPPIMXL 815
LSGGQK R++ A + NP I+ L
Sbjct: 637 LSGGQKSRVAFACLGLQNPHILIL 660
>SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein
Bms1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1121
Score = 31.5 bits (68), Expect = 0.18
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 5/46 (10%)
Frame = +2
Query: 425 LTAIMGPSGAGKSTLLNIL----TGYKTSGMEGSIT-VNGMERNLS 547
+ A+MGP G GKSTL+ L + Y S + G IT V G +R ++
Sbjct: 76 IVAVMGPPGTGKSTLIKSLVRRYSKYTISQITGPITVVAGKKRRIT 121
>SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1427
Score = 30.7 bits (66), Expect = 0.31
Identities = 17/52 (32%), Positives = 32/52 (61%)
Frame = +2
Query: 386 ILKSVSGRLRSGELTAIMGPSGAGKSTLLNILTGYKTSGMEGSITVNGMERN 541
+L+ ++ + E AI+G +G+GKST+ L + T M G++ V+G++ N
Sbjct: 1196 VLEDINLEILPKEKIAIVGRTGSGKSTMGLTLLRF-TMIMSGAVEVDGIDIN 1246
Score = 28.3 bits (60), Expect = 1.6
Identities = 14/53 (26%), Positives = 30/53 (56%)
Frame = +2
Query: 389 LKSVSGRLRSGELTAIMGPSGAGKSTLLNILTGYKTSGMEGSITVNGMERNLS 547
LK+++ + + T ++G +G+GKSTL L G + + G +T + + ++
Sbjct: 597 LKNLNFTIPRNQFTLVVGSTGSGKSTLAMALLG-ELHVISGKMTTPSISQRIA 648
Score = 28.3 bits (60), Expect = 1.6
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = +3
Query: 738 SNLSGGQKKRLSIALELVNNPPI 806
S+LSGGQK+R+S+A L +N +
Sbjct: 705 SSLSGGQKQRVSLARALYSNAEV 727
>SPBC9B6.09c |mdl1||mitochondrial peptide-transporting
ATPase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 726
Score = 30.7 bits (66), Expect = 0.31
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = +3
Query: 744 LSGGQKKRLSIALELVNNPPIMXL 815
LSGGQK+R++IA L+ NP + L
Sbjct: 620 LSGGQKQRIAIARALLRNPAFLIL 643
Score = 30.3 bits (65), Expect = 0.40
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +2
Query: 383 TILKSVSGRLRSGELTAIMGPSGAGKSTLLNILTGYKTSGMEGSITVNGME 535
+I ++S + G AI+ PSG GKST+ +L + G I +G++
Sbjct: 498 SIFDNLSFDIHPGTNVAIVAPSGGGKSTISQLLLRFYAPS-SGKILADGVD 547
>SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1233
Score = 29.1 bits (62), Expect = 0.93
Identities = 13/34 (38%), Positives = 24/34 (70%), Gaps = 3/34 (8%)
Frame = +2
Query: 422 ELTAIMGPSGAGKSTLLNILT---GYKTSGMEGS 514
+ T+I+GP+GAGKS L++ ++ G K+S + +
Sbjct: 26 DFTSIIGPNGAGKSNLMDAISFVLGVKSSHLRST 59
>SPAC222.14c |||GTP binding protein Sey1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 762
Score = 29.1 bits (62), Expect = 0.93
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +2
Query: 425 LTAIMGPSGAGKSTLLNILTGYKTSGMEGS 514
+ A++G GKSTLLN L G S M+ S
Sbjct: 41 VVAVLGSQSTGKSTLLNNLFGTSFSVMDAS 70
>SPCC825.01 |||ribosome biogenesis ATPase, Arb family
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 822
Score = 28.3 bits (60), Expect = 1.6
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +2
Query: 383 TILKSVSGRLRSGELTAIMGPSGAGKSTLLNIL 481
TI ++ L A++GP+GAGK+TL+ ++
Sbjct: 608 TIFSKLNFGLDLKSRVALVGPNGAGKTTLIKLI 640
Score = 27.9 bits (59), Expect = 2.2
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +2
Query: 380 KTILKSVSGRLRSGELTAIMGPSGAGKSTLLNIL 481
K ++K L +G ++ P+G+GKSTLL+ +
Sbjct: 288 KLLIKDSELNLINGRRYGLIAPNGSGKSTLLHAI 321
>SPAC222.08c |||imidazoleglycerol-phosphate synthase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 234
Score = 27.9 bits (59), Expect = 2.2
Identities = 15/57 (26%), Positives = 27/57 (47%)
Frame = -1
Query: 535 LHTVDRYTTLHTGSLVSCEYVEKRRLPGTRRTHDGRELAGTEPTRNRLEDRFDIALP 365
++++D + + CE ++ +PG T G+ + E R+RLE D LP
Sbjct: 40 MNSIDGVISFPVKTAKDCENIDGLIIPGGESTTIGKLINIDEKLRDRLEHLVDQGLP 96
>SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting
protein 3 homolog Bud6|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1385
Score = 27.5 bits (58), Expect = 2.8
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = +2
Query: 173 KNMELVDKDSNLAGPVDSKPIL---FDRKGSVKVTITPTQHKTL 295
K +V +DS+ + + +P + FDRK S K+T TP+ K+L
Sbjct: 300 KRPSIVRQDSHDSNKLSRRPTINTSFDRKFSPKLTRTPSLTKSL 343
>SPAC14C4.13 |rad17||RFC related checkpoint protein
Rad17|Schizosaccharomyces pombe|chr 1|||Manual
Length = 606
Score = 27.5 bits (58), Expect = 2.8
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +2
Query: 368 KSNVKTILKSVSGRLRSGELTAIMGPSGAGKSTLLNIL 481
KS + I + + L I GPSG GKST + +L
Sbjct: 88 KSKISAIKQWMLTDSLESRLLLICGPSGCGKSTAVQVL 125
>SPBC1539.03c |||argininosuccinate lyase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 460
Score = 27.1 bits (57), Expect = 3.8
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -2
Query: 159 YCLSLHYDTKDFNMDCDNDASYTR 88
Y S+HYD + FN D D +Y +
Sbjct: 23 YNESIHYDKRMFNADIDGSKAYAK 46
>SPAC1A6.05c |||triacylglycerol lipase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 483
Score = 26.6 bits (56), Expect = 5.0
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -2
Query: 291 VLCWVGVIVTFTLPFLSKRIGLESTGP 211
VL W V+ T ++PFL KR L P
Sbjct: 283 VLVWSAVVATCSVPFLFKRATLWERDP 309
>SPAC22H10.05c |||mRNA cleavage and polyadenylation specificity
factor complex subunit |Schizosaccharomyces pombe|chr
1|||Manual
Length = 456
Score = 26.6 bits (56), Expect = 5.0
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +2
Query: 419 GELTAIMGPSGAGKSTLLNILTGYKTSGMEGSITVN 526
G ++GP GK+++L IL Y I VN
Sbjct: 106 GPCVCLIGPRSCGKTSVLKILESYALKQSRHPICVN 141
>SPAP8A3.11c |||mitochondrial GTPase Mtg2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 419
Score = 26.6 bits (56), Expect = 5.0
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +2
Query: 434 IMGPSGAGKSTLLNILTGYKTSGMEGSIT 520
++G AGKSTLLN LT K+ E T
Sbjct: 241 LVGLPNAGKSTLLNCLTASKSKVGEYEFT 269
>SPBC1198.05 |||guanylate kinase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 202
Score = 26.6 bits (56), Expect = 5.0
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Frame = +2
Query: 395 SVSGRLRSGEL--TAIMGPSGAGKSTLLNIL 481
SV+ +L + +L + GPSG GKSTLL L
Sbjct: 8 SVASKLVTLKLKPVVVFGPSGVGKSTLLKRL 38
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 26.2 bits (55), Expect = 6.6
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 5/52 (9%)
Frame = +2
Query: 530 MERNLSSFRKLSCYIMQDNQLHGNLTVEEAMGVAT-----SLKLPSSTTRDE 670
ME N S + ++ DN +LT EE + + S +LPSST++DE
Sbjct: 1 MEENSSELDSNNFNVLVDNLAGLSLTDEEVRRILSPRKEGSRQLPSSTSKDE 52
>SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 469
Score = 26.2 bits (55), Expect = 6.6
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = +2
Query: 434 IMGPSGAGKSTLLNIL 481
++G SG+GKSTL+N L
Sbjct: 100 VLGESGSGKSTLVNTL 115
>SPCC895.09c |ucp12||ATP-dependent RNA helicase Ucp1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1327
Score = 26.2 bits (55), Expect = 6.6
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Frame = +2
Query: 350 KVQEGRKSNVKTILKSVSGRLRSGELTAIMGPSGAGKST--LLNILTGYKTSGMEGSITV 523
KV+E K + + ++ ++ I G +G+GKST + IL Y +SG + TV
Sbjct: 570 KVREREKLPAWESRRKIMDAIQHSQVVVISGETGSGKSTQVVQFILDHYLSSGEKDLQTV 629
>SPCC553.03 |pex1||AAA family ATPase Pex1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 937
Score = 26.2 bits (55), Expect = 6.6
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +2
Query: 434 IMGPSGAGKSTLLNILTG-YKTSGMEGSITVNGMERNLSSFRKLSCY 571
I GP G GKS L++ L Y + + + V+ E + SSF K +
Sbjct: 377 INGPKGCGKSNLVHSLFDYYSLNSIYFQMIVSCSEIDRSSFAKFQSF 423
>SPCC1906.02c |||CUE domain protein Cue3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 581
Score = 25.8 bits (54), Expect = 8.7
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +3
Query: 684 PKRSFTPLSLMEXRKTMTSNLSGGQKKRLSIALE 785
PK++ PLSL + SN + +K R ++A E
Sbjct: 339 PKKAIAPLSLSSSVTAVISNRTSDKKTRSTVAEE 372
>SPAC6F12.07 |tom20||mitochondrial TOM complex subunit
Tom20|Schizosaccharomyces pombe|chr 1|||Manual
Length = 152
Score = 25.8 bits (54), Expect = 8.7
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +2
Query: 599 NLTVEEAMGVATSLKLPSSTTRDEKEM 679
++TVEEA+ V S +PSS +EKE+
Sbjct: 59 DITVEEALQVVASTPVPSSA--EEKEL 83
>SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 4924
Score = 25.8 bits (54), Expect = 8.7
Identities = 12/39 (30%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -2
Query: 540 LRSIPLTVILPSIPEVLYPVSML-RSVDFPAPDGPMMAV 427
++ LT+ +P++L PVS L RS+D +G ++ +
Sbjct: 4346 IKKFRLTLSSAMVPDILVPVSYLPRSLDHSENEGKLLNI 4384
>SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 803
Score = 25.8 bits (54), Expect = 8.7
Identities = 10/37 (27%), Positives = 24/37 (64%)
Frame = +2
Query: 362 GRKSNVKTILKSVSGRLRSGELTAIMGPSGAGKSTLL 472
GR+ ++ ++ +S R ++ A++GP+G GK+ ++
Sbjct: 115 GREEEIQRTIQILSRRTKNNP--ALVGPAGVGKTAIM 149
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 25.8 bits (54), Expect = 8.7
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +2
Query: 434 IMGPSGAGKSTLLNILT-GYKTSGMEGSITVN 526
I+G AGK++LLN+ T GY E +I N
Sbjct: 18 ILGDGAAGKTSLLNVFTKGYFPQVYEPTIFEN 49
>SPAC20H4.07 |rhp57||RecA family ATPase Rhp57|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 354
Score = 25.8 bits (54), Expect = 8.7
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +2
Query: 392 KSVSGRLRSGELTAIMGPSGAGKS 463
+++ G + G+LT I G SG+GKS
Sbjct: 84 ETLHGGIPVGQLTEICGESGSGKS 107
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,568,301
Number of Sequences: 5004
Number of extensions: 70242
Number of successful extensions: 275
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 230
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 275
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 471335896
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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