Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_P17
(915 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1691 - 28726307-28726323,28726588-28726953,28727483-287275... 34 0.18
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542... 28 1.2
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 31 1.7
07_01_0080 + 587674-588510 31 1.7
09_02_0327 - 7284829-7284889,7284946-7286126 24 3.6
05_01_0004 - 34967-35149,35340-35501,36078-36225,36309-36385,365... 29 3.9
08_02_1329 - 26182762-26183007,26183149-26183249,26183533-261836... 29 5.2
07_01_0674 + 5047503-5047646,5047808-5047901,5048743-5048828,504... 29 5.2
05_04_0206 + 19034259-19035462,19036870-19037045,19037752-190379... 29 5.2
11_01_0133 + 1121392-1122731,1123417-1123858 25 5.9
05_01_0162 - 1095020-1095202,1096114-1096188,1096939-1097039,109... 24 7.7
10_06_0039 - 9966744-9967535,9968241-9968482,9969021-9969223,996... 28 9.0
05_07_0031 - 27183252-27183317,27183542-27184282 28 9.0
01_01_0446 + 3321832-3322232,3322398-3322455,3322810-3323748,332... 25 9.9
>07_03_1691 -
28726307-28726323,28726588-28726953,28727483-28727567,
28728255-28728387,28729793-28730328
Length = 378
Score = 33.9 bits (74), Expect = 0.18
Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = -2
Query: 704 PXKKPPXPX-GXGXFXXXXXPPPPPPXPXXKKKKXXXXFKF 585
P PP P G G PPPPPP P ++ + F+F
Sbjct: 24 PCPLPPIPSCGGGGGGAGPTPPPPPPPPHHRRARSEVAFRF 64
>03_02_0071 +
5425722-5427154,5427259-5427464,5428445-5428686,
5428788-5429570
Length = 887
Score = 28.3 bits (60), Expect = 9.0
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = -2
Query: 704 PXKKPPXPXGXGXFXXXXXPPPPPPXP 624
P PP P PPPPPP P
Sbjct: 354 PPPPPPPPPPPPKLNTAPKPPPPPPPP 380
Score = 25.0 bits (52), Expect(2) = 1.2
Identities = 10/27 (37%), Positives = 11/27 (40%)
Frame = -2
Query: 704 PXKKPPXPXGXGXFXXXXXPPPPPPXP 624
P +P P PPPPPP P
Sbjct: 338 PSPRPVQPSNAPPPPPPPPPPPPPPPP 364
Score = 24.6 bits (51), Expect(2) = 1.2
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -2
Query: 647 PPPPPPXPXXK 615
PPPPPP P K
Sbjct: 356 PPPPPPPPPPK 366
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 30.7 bits (66), Expect = 1.7
Identities = 14/48 (29%), Positives = 15/48 (31%)
Frame = -2
Query: 767 PXPXPXXXXXXXFXXXXXEXXPXKKPPXPXGXGXFXXXXXPPPPPPXP 624
P P P P PP P + PPPPPP P
Sbjct: 546 PPPPPPPPPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQPPPPPPPPP 593
Score = 30.3 bits (65), Expect = 2.2
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -2
Query: 704 PXKKPPXPXGXGXFXXXXXPPPPPPXP 624
P PP P G PPPPPP P
Sbjct: 545 PPPPPPPPPPSGNKPAFSPPPPPPPPP 571
Score = 28.7 bits (61), Expect = 6.8
Identities = 14/48 (29%), Positives = 14/48 (29%)
Frame = -2
Query: 767 PXPXPXXXXXXXFXXXXXEXXPXKKPPXPXGXGXFXXXXXPPPPPPXP 624
P P P P PP P PPPPPP P
Sbjct: 548 PPPPPPPSGNKPAFSPPPPPPPPPPPPLPQSNYASSQPPPPPPPPPLP 595
Score = 28.3 bits (60), Expect = 9.0
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = -2
Query: 704 PXKKPPXPXGXGXFXXXXXPPPPPPXP 624
P + P P G PPPPPP P
Sbjct: 646 PNRLVPPPPAPGIGNKFPAPPPPPPPP 672
Score = 24.6 bits (51), Expect(2) = 3.3
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -2
Query: 647 PPPPPPXPXXKK 612
PPPPPP P K
Sbjct: 547 PPPPPPPPSGNK 558
Score = 23.4 bits (48), Expect(2) = 3.3
Identities = 10/28 (35%), Positives = 11/28 (39%)
Frame = -2
Query: 713 EXXPXKKPPXPXGXGXFXXXXXPPPPPP 630
E +K P P PPPPPP
Sbjct: 527 ESPSDRKLPSPSPTAAAPPPPPPPPPPP 554
>07_01_0080 + 587674-588510
Length = 278
Score = 30.7 bits (66), Expect = 1.7
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -2
Query: 704 PXKKPPXPXGXGXFXXXXXPPPPPPXP 624
P PP P G PPPPPP P
Sbjct: 91 PPPPPPPPPSSGSPPPPPPPPPPPPPP 117
Score = 29.1 bits (62), Expect = 5.2
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -2
Query: 692 PPXPXGXGXFXXXXXPPPPPP 630
PP G G F PPPPPP
Sbjct: 79 PPRLGGDGMFRRPPPPPPPPP 99
Score = 28.3 bits (60), Expect = 9.0
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = -2
Query: 704 PXKKPPXPXGXGXFXXXXXPPPPPPXP 624
P PP P PPPPPP P
Sbjct: 92 PPPPPPPPSSGSPPPPPPPPPPPPPPP 118
>09_02_0327 - 7284829-7284889,7284946-7286126
Length = 413
Score = 24.2 bits (50), Expect(2) = 3.6
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -2
Query: 647 PPPPPPXPXXKKKK 606
PPPPPP P + ++
Sbjct: 58 PPPPPPPPPPRGRR 71
Score = 23.8 bits (49), Expect(2) = 3.6
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = -2
Query: 665 FXXXXXPPPPPPXP 624
F PPPPPP P
Sbjct: 49 FGAHPPPPPPPPPP 62
>05_01_0004 -
34967-35149,35340-35501,36078-36225,36309-36385,
36507-36577,36850-37263,37518-38268
Length = 601
Score = 29.5 bits (63), Expect = 3.9
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = -2
Query: 704 PXKKPPXPXGXGXFXXXXXPPPPPPXP 624
P PP P PPPPPP P
Sbjct: 60 PPASPPLPSATPPLAASPPPPPPPPPP 86
>08_02_1329 -
26182762-26183007,26183149-26183249,26183533-26183602,
26183692-26183895,26186435-26186941,26188672-26188677
Length = 377
Score = 29.1 bits (62), Expect = 5.2
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = -2
Query: 704 PXKKPPXPXGXGXFXXXXXPPPPPPXP 624
P + PP P PPPPPP P
Sbjct: 65 PSRAPPPPPSHHERAPSDAPPPPPPAP 91
>07_01_0674 +
5047503-5047646,5047808-5047901,5048743-5048828,
5049380-5049429,5049517-5049586,5049668-5049749,
5049867-5050267,5050414-5050941,5051823-5052044
Length = 558
Score = 29.1 bits (62), Expect = 5.2
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = -2
Query: 704 PXKKPPXPXGXGXFXXXXXPPPPPPXP 624
P PP P PPPPPP P
Sbjct: 232 PPPPPPKPANIAGAPGLPLPPPPPPPP 258
>05_04_0206 +
19034259-19035462,19036870-19037045,19037752-19037975,
19038133-19038914,19039337-19039494
Length = 847
Score = 29.1 bits (62), Expect = 5.2
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = -2
Query: 647 PPPPPPXPXXKKKKXXXXFKFFFXXXXG 564
PPPPPP P K + +FF G
Sbjct: 218 PPPPPPPPPPDSKPGVDTWDYFFSMDEG 245
>11_01_0133 + 1121392-1122731,1123417-1123858
Length = 593
Score = 25.4 bits (53), Expect(2) = 5.9
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = -2
Query: 647 PPPPPPXPXXKKKK 606
PPPPPP P ++++
Sbjct: 164 PPPPPPQPDKRRRE 177
Score = 21.8 bits (44), Expect(2) = 5.9
Identities = 8/21 (38%), Positives = 8/21 (38%)
Frame = -2
Query: 692 PPXPXGXGXFXXXXXPPPPPP 630
PP P PPPPP
Sbjct: 137 PPPPSHPALLPPDATAPPPPP 157
>05_01_0162 -
1095020-1095202,1096114-1096188,1096939-1097039,
1097467-1097577,1097704-1097807,1098260-1098493,
1098583-1099304
Length = 509
Score = 24.2 bits (50), Expect(2) = 7.7
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -2
Query: 647 PPPPPPXPXXKKKK 606
PPPPPP P + K
Sbjct: 146 PPPPPPQPQPQAAK 159
Score = 22.6 bits (46), Expect(2) = 7.7
Identities = 9/23 (39%), Positives = 9/23 (39%)
Frame = -2
Query: 692 PPXPXGXGXFXXXXXPPPPPPXP 624
PP P PP PPP P
Sbjct: 128 PPRPHPDIRILAHAPPPAPPPPP 150
>10_06_0039 -
9966744-9967535,9968241-9968482,9969021-9969223,
9969333-9970645
Length = 849
Score = 28.3 bits (60), Expect = 9.0
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = -2
Query: 704 PXKKPPXPXGXGXFXXXXXPPPPPPXP 624
P PP P F PPPPP P
Sbjct: 328 PPAPPPPPPPPSRFNNTTPKPPPPPPP 354
Score = 28.3 bits (60), Expect = 9.0
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = -2
Query: 704 PXKKPPXPXGXGXFXXXXXPPPPPPXP 624
P PP P PPPPPP P
Sbjct: 331 PPPPPPPPSRFNNTTPKPPPPPPPPEP 357
>05_07_0031 - 27183252-27183317,27183542-27184282
Length = 268
Score = 28.3 bits (60), Expect = 9.0
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = -2
Query: 704 PXKKPPXPXGXGXFXXXXXPPPPPPXP 624
P KPP PPPPPP P
Sbjct: 7 PRAKPPAATSTHHLEPWGQPPPPPPTP 33
>01_01_0446 +
3321832-3322232,3322398-3322455,3322810-3323748,
3324504-3324654,3324740-3324818,3325826-3325934
Length = 578
Score = 24.6 bits (51), Expect(2) = 9.9
Identities = 13/46 (28%), Positives = 16/46 (34%)
Frame = +1
Query: 631 GGGGGGFXXXXKXPXPXGXGGFFXGXXSXXXXXKXXXXXXXGXGXG 768
GGGGGG+ G GG+ G + G G G
Sbjct: 213 GGGGGGYNRGGGDFSSGGGGGYNRGGGDYNSGGRGGGTGGGGRGGG 258
Score = 21.8 bits (44), Expect(2) = 9.9
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +1
Query: 625 GXGGGGGGF 651
G GGGGGG+
Sbjct: 201 GGGGGGGGY 209
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,319,578
Number of Sequences: 37544
Number of extensions: 258403
Number of successful extensions: 6798
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2441
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5230
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2600672280
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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