Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_P17
(915 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 27 0.099
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 33 0.38
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 33 0.38
U58753-8|AAC24439.1| 633|Caenorhabditis elegans Hypothetical pr... 25 1.4
U58753-7|AAC24433.1| 581|Caenorhabditis elegans Hypothetical pr... 25 1.4
L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family ... 25 2.4
L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family ... 25 2.4
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 29 3.5
L25598-2|AAV58887.1| 780|Caenorhabditis elegans Calpain family ... 25 4.0
L25598-5|AAM15550.1| 113|Caenorhabditis elegans Calpain family ... 25 4.9
Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical pr... 28 8.1
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 28 8.1
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 28 8.1
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 28 8.1
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 28 8.1
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 28 8.1
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 23 8.4
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 27.1 bits (57), Expect(2) = 0.099
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -2
Query: 647 PPPPPPXPXXKKK 609
PPPPPP P +KK
Sbjct: 1390 PPPPPPLPSEEKK 1402
Score = 26.2 bits (55), Expect(2) = 0.099
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = -2
Query: 704 PXKKPPXPXGXGXFXXXXXPPPPPP 630
P PP P PPPPPP
Sbjct: 1339 PPPPPPPPPPSDDLTPVPPPPPPPP 1363
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 32.7 bits (71), Expect = 0.38
Identities = 15/48 (31%), Positives = 15/48 (31%)
Frame = -2
Query: 767 PXPXPXXXXXXXFXXXXXEXXPXKKPPXPXGXGXFXXXXXPPPPPPXP 624
P P P P PP P G PPPPPP P
Sbjct: 610 PPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPP 657
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 32.7 bits (71), Expect = 0.38
Identities = 15/48 (31%), Positives = 15/48 (31%)
Frame = -2
Query: 767 PXPXPXXXXXXXFXXXXXEXXPXKKPPXPXGXGXFXXXXXPPPPPPXP 624
P P P P PP P G PPPPPP P
Sbjct: 436 PPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPP 483
>U58753-8|AAC24439.1| 633|Caenorhabditis elegans Hypothetical
protein W03B1.9 protein.
Length = 633
Score = 25.4 bits (53), Expect(2) = 1.4
Identities = 9/28 (32%), Positives = 13/28 (46%)
Frame = -2
Query: 647 PPPPPPXPXXKKKKXXXXFKFFFXXXXG 564
PPPPPP P ++ + + F G
Sbjct: 445 PPPPPPPPPRRRSRSRDRPRLVFSNIGG 472
Score = 23.8 bits (49), Expect(2) = 1.4
Identities = 9/21 (42%), Positives = 9/21 (42%)
Frame = -2
Query: 692 PPXPXGXGXFXXXXXPPPPPP 630
P P G PPPPPP
Sbjct: 432 PAPPLQVGLVGRVPPPPPPPP 452
>U58753-7|AAC24433.1| 581|Caenorhabditis elegans Hypothetical
protein W03B1.5 protein.
Length = 581
Score = 25.4 bits (53), Expect(2) = 1.4
Identities = 9/28 (32%), Positives = 13/28 (46%)
Frame = -2
Query: 647 PPPPPPXPXXKKKKXXXXFKFFFXXXXG 564
PPPPPP P ++ + + F G
Sbjct: 393 PPPPPPPPPRRRSRSRDRPRLVFSNIGG 420
Score = 23.8 bits (49), Expect(2) = 1.4
Identities = 9/21 (42%), Positives = 9/21 (42%)
Frame = -2
Query: 692 PPXPXGXGXFXXXXXPPPPPP 630
P P G PPPPPP
Sbjct: 380 PAPPLQVGLVGRVPPPPPPPP 400
>L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family
protein 1, isoform d protein.
Length = 759
Score = 24.6 bits (51), Expect(2) = 2.4
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +1
Query: 613 FFXXGXGGGGGG 648
FF G GGGGGG
Sbjct: 50 FFGGGGGGGGGG 61
Score = 23.8 bits (49), Expect(2) = 2.4
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = +1
Query: 625 GXGGGGGGFXXXXKXPXPXGXGGF 696
G GGGGG + G GGF
Sbjct: 98 GGGGGGGNYGGGGGNQGGGGGGGF 121
>L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family
protein 1, isoform b protein.
Length = 737
Score = 24.6 bits (51), Expect(2) = 2.4
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +1
Query: 613 FFXXGXGGGGGG 648
FF G GGGGGG
Sbjct: 50 FFGGGGGGGGGG 61
Score = 23.8 bits (49), Expect(2) = 2.4
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = +1
Query: 625 GXGGGGGGFXXXXKXPXPXGXGGFFXG 705
G GGGGGG G GG + G
Sbjct: 57 GGGGGGGGGFGGGNGGFGGGGGGNYGG 83
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 29.5 bits (63), Expect = 3.5
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -2
Query: 704 PXKKPPXPXGXGXFXXXXXPPPPPPXPXXK 615
P PP P PPPPPP P K
Sbjct: 67 PPPPPPPPPLISILQQAPPPPPPPPPPTLK 96
>L25598-2|AAV58887.1| 780|Caenorhabditis elegans Calpain family
protein 1, isoform a protein.
Length = 780
Score = 24.6 bits (51), Expect(2) = 4.0
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +1
Query: 613 FFXXGXGGGGGG 648
FF G GGGGGG
Sbjct: 50 FFGGGGGGGGGG 61
Score = 23.0 bits (47), Expect(2) = 4.0
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +1
Query: 625 GXGGGGGGF 651
G GGGGGGF
Sbjct: 58 GGGGGGGGF 66
>L25598-5|AAM15550.1| 113|Caenorhabditis elegans Calpain family
protein 1, isoform c protein.
Length = 113
Score = 24.6 bits (51), Expect(2) = 4.9
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +1
Query: 613 FFXXGXGGGGGG 648
FF G GGGGGG
Sbjct: 50 FFGGGGGGGGGG 61
Score = 23.0 bits (47), Expect(2) = 4.9
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +1
Query: 625 GXGGGGGGF 651
G GGGGGGF
Sbjct: 58 GGGGGGGGF 66
>Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical
protein T16G1.1 protein.
Length = 695
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -2
Query: 695 KPPXPXGXGXFXXXXXPPPPPP 630
KPP G G PPPPPP
Sbjct: 519 KPPSSSGSGSNRRSGPPPPPPP 540
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -2
Query: 692 PPXPXGXGXFXXXXXPPPPPPXP 624
PP P G PPPPPP P
Sbjct: 743 PPPPPPGGLPPISGGPPPPPPPP 765
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -2
Query: 692 PPXPXGXGXFXXXXXPPPPPPXP 624
PP P G PPPPPP P
Sbjct: 743 PPPPPPGGLPPISGGPPPPPPPP 765
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 28.3 bits (60), Expect = 8.1
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -2
Query: 689 PXPXGXGXFXXXXXPPPPPPXP 624
P P G G F PPPPPP P
Sbjct: 664 PPPGGLGGFMPP--PPPPPPMP 683
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 28.3 bits (60), Expect = 8.1
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -2
Query: 689 PXPXGXGXFXXXXXPPPPPPXP 624
P P G G F PPPPPP P
Sbjct: 664 PPPGGLGGFMPP--PPPPPPMP 683
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -2
Query: 692 PPXPXGXGXFXXXXXPPPPPPXP 624
PP P G PPPPPP P
Sbjct: 326 PPPPPPGGLPPISGGPPPPPPPP 348
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 23.4 bits (48), Expect(2) = 8.4
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -2
Query: 647 PPPPPPXP 624
PPPPPP P
Sbjct: 578 PPPPPPPP 585
Score = 23.0 bits (47), Expect(2) = 8.4
Identities = 9/21 (42%), Positives = 9/21 (42%)
Frame = -2
Query: 692 PPXPXGXGXFXXXXXPPPPPP 630
PP P PPPPPP
Sbjct: 523 PPMPGMAPLSTGAPTPPPPPP 543
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,322,725
Number of Sequences: 27780
Number of extensions: 170988
Number of successful extensions: 1771
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 600
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1253
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2339274014
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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