Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_P15
         (904 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0833 - 25196091-25196372,25196464-25196565,25196640-251968...    31   0.95 
12_02_0082 - 13372997-13373863,13373928-13374386                       30   2.9  
01_01_1008 - 7987936-7988628,7988923-7989102                           30   2.9  
09_04_0741 - 19852339-19852497,19853185-19853246,19853352-198534...    29   6.7  

>06_03_0833 -
           25196091-25196372,25196464-25196565,25196640-25196838,
           25196978-25197278,25197471-25197645,25197842-25198012,
           25198207-25198239
          Length = 420

 Score = 31.5 bits (68), Expect = 0.95
 Identities = 21/61 (34%), Positives = 25/61 (40%), Gaps = 2/61 (3%)
 Frame = +3

Query: 522 CWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLXAPSCALLFRPL--PLTGYLSA 695
           CWR  +        T  D Q    +    +KD    P   PSC L+F PL  PL   L A
Sbjct: 283 CWRHFLNQDFAMFATAGDDQWNPEDHLPSFKDDSLIPYDVPSCHLIFIPLLQPLHYSLYA 342

Query: 696 F 698
           F
Sbjct: 343 F 343


>12_02_0082 - 13372997-13373863,13373928-13374386
          Length = 441

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 13/21 (61%), Positives = 14/21 (66%)
 Frame = +3

Query: 645 SCALLFRPLPLTGYLSAFLPS 707
           SCALLF P+PL G     LPS
Sbjct: 164 SCALLFSPMPLDGPTLGLLPS 184


>01_01_1008 - 7987936-7988628,7988923-7989102
          Length = 290

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -3

Query: 725 RKRHASRREKGGQVSGKRQGSEQESARGSXQGETPG 618
           R R   RR  GG+V+G+     +   RG+ +GE  G
Sbjct: 239 RVRRRGRRGGGGEVNGEEAARSRRRRRGAWEGEEEG 274


>09_04_0741 -
           19852339-19852497,19853185-19853246,19853352-19853415,
           19853561-19853614,19853744-19853890,19854460-19854564,
           19854651-19854794,19854987-19855093,19855613-19855712,
           19855804-19855833,19856492-19856608,19856705-19856828,
           19857143-19857189,19857272-19857400,19857777-19857852,
           19858446-19858543,19858630-19858671,19858811-19859044
          Length = 612

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +1

Query: 646 RALSCSDPCRLPDTCPPFSLREAWRFLIXHA 738
           R L+C   C  P  CPP+S    W+ ++  A
Sbjct: 466 RELNCKSICHSP-MCPPYSAMTEWQHMVLSA 495


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,223,275
Number of Sequences: 37544
Number of extensions: 407913
Number of successful extensions: 1202
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1168
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1202
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2553813320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)