Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_P14
         (876 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    25   1.0  
Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    23   2.4  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   4.2  
AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    23   4.2  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    23   4.2  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    23   4.2  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    22   7.3  

>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 12/38 (31%), Positives = 16/38 (42%)
 Frame = +3

Query: 99  LDISAS*SKVKMSLSAIHPGIPTEPPSRSGLRTGAYSG 212
           LD  A  SK+ + L     G     P+ + L  G Y G
Sbjct: 248 LDEGAPPSKINLGLGTYGRGFALADPTNTSLYAGTYGG 285


>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -1

Query: 249 GHRWRDDGRQEIVRSKRQ 196
           GH W+ D  +E VR++ Q
Sbjct: 117 GHEWQADVSEEAVRARMQ 134



 Score = 23.0 bits (47), Expect = 3.1
 Identities = 11/34 (32%), Positives = 15/34 (44%)
 Frame = +1

Query: 592 PSLKPARSGRRLXSPLRKLRATKQNNDSRNAVXQ 693
           P+L PA  G  L    R  R+ + N D+     Q
Sbjct: 60  PNLNPAVQGSSLTEGKRSKRSKRPNGDTNGDTSQ 93


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -3

Query: 202 APVRSPDREGGSVGIPG*MADRDIFTLL 119
           AP++ P REG     PG +A  +I  +L
Sbjct: 436 APIKGPGREGFYTQNPGFLAYFEICDML 463


>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 11/38 (28%), Positives = 16/38 (42%)
 Frame = +3

Query: 99  LDISAS*SKVKMSLSAIHPGIPTEPPSRSGLRTGAYSG 212
           LD  A  SK+ + L +   G     P+ + L    Y G
Sbjct: 249 LDEGAPPSKINLGLGSYGRGFALADPTNTSLYAATYGG 286


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 11/38 (28%), Positives = 16/38 (42%)
 Frame = +3

Query: 99  LDISAS*SKVKMSLSAIHPGIPTEPPSRSGLRTGAYSG 212
           LD  A  SK+ + L +   G     P+ + L    Y G
Sbjct: 249 LDEGAPPSKINLGLGSYGRGFALADPTNTSLYAATYGG 286


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -2

Query: 569 GSRSPGSDHGQH 534
           G+RSPG DH ++
Sbjct: 14  GARSPGGDHSEN 25


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 13/52 (25%), Positives = 25/52 (48%)
 Frame = +1

Query: 322 KDKFQVNLDVQHFSPEEISVKTADGYVIVEGKHEERQDEHGYISRQFTRRYA 477
           KD ++   D++   P+   + +  G   V G+ EE+  ++  +    TRR A
Sbjct: 83  KDNYRKVTDLKKRFPKLKVLLSVGGNADVSGQDEEKNIKYRNLLETTTRRLA 134


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,693
Number of Sequences: 336
Number of extensions: 3198
Number of successful extensions: 15
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24203322
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)