Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_P13
(1075 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 36 0.050
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 36 0.050
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 36 0.050
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 36 0.066
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 36 0.066
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 36 0.066
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 36 0.066
Z46791-3|CAA86757.1| 323|Caenorhabditis elegans Hypothetical pr... 34 0.15
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 34 0.20
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 33 0.26
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 33 0.26
U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protei... 33 0.26
U13644-9|AAB52680.3| 492|Caenorhabditis elegans Cell death abno... 33 0.26
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 33 0.26
AF061513-1|AAC24362.1| 492|Caenorhabditis elegans candidate ada... 33 0.26
U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protei... 33 0.35
M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein. 33 0.35
Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical pr... 33 0.46
U80451-9|AAB37843.1| 285|Caenorhabditis elegans Collagen protei... 33 0.46
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 32 0.81
U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protei... 32 0.81
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 0.81
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 0.81
AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular col... 32 0.81
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 0.81
Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical pr... 31 1.1
AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen prot... 31 1.1
U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protei... 31 1.4
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 31 1.4
AC084197-24|AAM44390.1| 297|Caenorhabditis elegans Collagen pro... 31 1.4
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 1.9
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 31 1.9
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 1.9
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 30 3.3
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 30 3.3
Z49938-2|CAA90187.1| 306|Caenorhabditis elegans Hypothetical pr... 30 3.3
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 30 3.3
M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen ... 30 3.3
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 30 3.3
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 30 3.3
Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical p... 29 4.3
Z68753-3|CAA92988.3| 984|Caenorhabditis elegans Hypothetical pr... 29 5.7
Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical pr... 29 5.7
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 29 5.7
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 29 5.7
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 29 5.7
Z70207-1|CAA94128.1| 291|Caenorhabditis elegans Hypothetical pr... 29 7.5
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 29 7.5
Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical pr... 29 7.5
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 29 7.5
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 29 7.5
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 29 7.5
Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical pr... 28 10.0
Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical pr... 28 10.0
Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical pr... 28 10.0
Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical pr... 28 10.0
Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical pr... 28 10.0
L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen... 28 10.0
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 35.9 bits (79), Expect = 0.050
Identities = 34/143 (23%), Positives = 36/143 (25%), Gaps = 2/143 (1%)
Frame = +1
Query: 445 PPGPXP--XXPXAAXSGXPXQRXRPXRGXLATXXPPSPTEXGXHPXXPPGXRASTGPHRT 618
PP P P P A SG P P P G P P G S P R
Sbjct: 237 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAG--GSPPPPRA 294
Query: 619 AXPXXHPXARXPPXTXGXAXXXXXXXXXXXXXGXPXRPRAXTTPXXXRTPXTAXHREPXP 798
P P R P T G P P R+P T P
Sbjct: 295 GSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSP 354
Query: 799 GRXGPXRPXPAXXXRPQXSXHQG 867
P R P +G
Sbjct: 355 PTGRPPRGGPGKSSEESSESREG 377
Score = 29.9 bits (64), Expect = 3.3
Identities = 27/105 (25%), Positives = 30/105 (28%), Gaps = 9/105 (8%)
Frame = +1
Query: 370 TPPTRGHA----PTAHXKPXPSXXXXDRXPPGPXPXXPXAAXSGXPXQRXR-----PXRG 522
+PP G P A P P PP P P A S P + P RG
Sbjct: 246 SPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRG 305
Query: 523 XLATXXPPSPTEXGXHPXXPPGXRASTGPHRTAXPXXHPXARXPP 657
T P P G P G + P P PP
Sbjct: 306 SPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPP 350
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 35.9 bits (79), Expect = 0.050
Identities = 34/143 (23%), Positives = 36/143 (25%), Gaps = 2/143 (1%)
Frame = +1
Query: 445 PPGPXP--XXPXAAXSGXPXQRXRPXRGXLATXXPPSPTEXGXHPXXPPGXRASTGPHRT 618
PP P P P A SG P P P G P P G S P R
Sbjct: 258 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAG--GSPPPPRA 315
Query: 619 AXPXXHPXARXPPXTXGXAXXXXXXXXXXXXXGXPXRPRAXTTPXXXRTPXTAXHREPXP 798
P P R P T G P P R+P T P
Sbjct: 316 GSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSP 375
Query: 799 GRXGPXRPXPAXXXRPQXSXHQG 867
P R P +G
Sbjct: 376 PTGRPPRGGPGKSSEESSESREG 398
Score = 29.9 bits (64), Expect = 3.3
Identities = 27/105 (25%), Positives = 30/105 (28%), Gaps = 9/105 (8%)
Frame = +1
Query: 370 TPPTRGHA----PTAHXKPXPSXXXXDRXPPGPXPXXPXAAXSGXPXQRXR-----PXRG 522
+PP G P A P P PP P P A S P + P RG
Sbjct: 267 SPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRG 326
Query: 523 XLATXXPPSPTEXGXHPXXPPGXRASTGPHRTAXPXXHPXARXPP 657
T P P G P G + P P PP
Sbjct: 327 SPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPP 371
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 35.9 bits (79), Expect = 0.050
Identities = 34/143 (23%), Positives = 36/143 (25%), Gaps = 2/143 (1%)
Frame = +1
Query: 445 PPGPXP--XXPXAAXSGXPXQRXRPXRGXLATXXPPSPTEXGXHPXXPPGXRASTGPHRT 618
PP P P P A SG P P P G P P G S P R
Sbjct: 243 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAG--GSPPPPRA 300
Query: 619 AXPXXHPXARXPPXTXGXAXXXXXXXXXXXXXGXPXRPRAXTTPXXXRTPXTAXHREPXP 798
P P R P T G P P R+P T P
Sbjct: 301 GSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPPTGSP 360
Query: 799 GRXGPXRPXPAXXXRPQXSXHQG 867
P R P +G
Sbjct: 361 PTGRPPRGGPGKSSEESSESREG 383
Score = 29.9 bits (64), Expect = 3.3
Identities = 27/105 (25%), Positives = 30/105 (28%), Gaps = 9/105 (8%)
Frame = +1
Query: 370 TPPTRGHA----PTAHXKPXPSXXXXDRXPPGPXPXXPXAAXSGXPXQRXR-----PXRG 522
+PP G P A P P PP P P A S P + P RG
Sbjct: 252 SPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRG 311
Query: 523 XLATXXPPSPTEXGXHPXXPPGXRASTGPHRTAXPXXHPXARXPP 657
T P P G P G + P P PP
Sbjct: 312 SPPTGSLPPPQAGGSPPPAGTGSPPPPPRQKRQAPERSPPTGSPP 356
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 35.5 bits (78), Expect = 0.066
Identities = 39/152 (25%), Positives = 45/152 (29%), Gaps = 4/152 (2%)
Frame = +1
Query: 445 PPGPX--PXXPXAAXS-GXPXQRXRPXRGXLATXXPPSPTEXGXHPXXPPGXRASTGPHR 615
PPGP P P G P P +G A P + P PPG GP
Sbjct: 106 PPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPAGPPG 165
Query: 616 TAXPXXHPXARXPPXTXGXAXXXXXXXXXXXXXGXPXRPRAXTTPXXXRTPXTAXHREP- 792
P +P + P G A G A P P + P
Sbjct: 166 PPGPDGNPGSPAGPSGPGPA-------GPPGPAGPAGNDGAPGAPGGPGEPGASEQGGPG 218
Query: 793 XPGRXGPXRPXPAXXXRPQXSXHQGRXXPAXP 888
PG GP P PA + G PA P
Sbjct: 219 EPGPAGP--PGPAGPAGNDGAPGTGGPGPAGP 248
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 35.5 bits (78), Expect = 0.066
Identities = 39/152 (25%), Positives = 45/152 (29%), Gaps = 4/152 (2%)
Frame = +1
Query: 445 PPGPX--PXXPXAAXS-GXPXQRXRPXRGXLATXXPPSPTEXGXHPXXPPGXRASTGPHR 615
PPGP P P G P P +G A P + P PPG GP
Sbjct: 106 PPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPAGPPG 165
Query: 616 TAXPXXHPXARXPPXTXGXAXXXXXXXXXXXXXGXPXRPRAXTTPXXXRTPXTAXHREP- 792
P +P + P G A G A P P + P
Sbjct: 166 PPGPDGNPGSPAGPSGPGPA-------GPPGPAGPAGNDGAPGAPGGPGEPGASEQGGPG 218
Query: 793 XPGRXGPXRPXPAXXXRPQXSXHQGRXXPAXP 888
PG GP P PA + G PA P
Sbjct: 219 EPGPAGP--PGPAGPAGNDGAPGTGGPGPAGP 248
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 35.5 bits (78), Expect = 0.066
Identities = 39/152 (25%), Positives = 45/152 (29%), Gaps = 4/152 (2%)
Frame = +1
Query: 445 PPGPX--PXXPXAAXS-GXPXQRXRPXRGXLATXXPPSPTEXGXHPXXPPGXRASTGPHR 615
PPGP P P G P P +G A P + P PPG GP
Sbjct: 106 PPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPAGPPG 165
Query: 616 TAXPXXHPXARXPPXTXGXAXXXXXXXXXXXXXGXPXRPRAXTTPXXXRTPXTAXHREP- 792
P +P + P G A G A P P + P
Sbjct: 166 PPGPDGNPGSPAGPSGPGPA-------GPPGPAGPAGNDGAPGAPGGPGEPGASEQGGPG 218
Query: 793 XPGRXGPXRPXPAXXXRPQXSXHQGRXXPAXP 888
PG GP P PA + G PA P
Sbjct: 219 EPGPAGP--PGPAGPAGNDGAPGTGGPGPAGP 248
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 35.5 bits (78), Expect = 0.066
Identities = 39/152 (25%), Positives = 45/152 (29%), Gaps = 4/152 (2%)
Frame = +1
Query: 445 PPGPX--PXXPXAAXS-GXPXQRXRPXRGXLATXXPPSPTEXGXHPXXPPGXRASTGPHR 615
PPGP P P G P P +G A P + P PPG GP
Sbjct: 106 PPGPGGSPGKPGKPGKPGAPGAPGNPGKGASAPCEPVTQPPCQPCPGGPPGPAGPAGPPG 165
Query: 616 TAXPXXHPXARXPPXTXGXAXXXXXXXXXXXXXGXPXRPRAXTTPXXXRTPXTAXHREP- 792
P +P + P G A G A P P + P
Sbjct: 166 PPGPDGNPGSPAGPSGPGPA-------GPPGPAGPAGNDGAPGAPGGPGEPGASEQGGPG 218
Query: 793 XPGRXGPXRPXPAXXXRPQXSXHQGRXXPAXP 888
PG GP P PA + G PA P
Sbjct: 219 EPGPAGP--PGPAGPAGNDGAPGTGGPGPAGP 248
>Z46791-3|CAA86757.1| 323|Caenorhabditis elegans Hypothetical
protein C09G5.4 protein.
Length = 323
Score = 34.3 bits (75), Expect = 0.15
Identities = 41/178 (23%), Positives = 50/178 (28%), Gaps = 1/178 (0%)
Frame = +1
Query: 358 RXXRTPPTRGHAPTAHXKPXPSXXXXDRXPPGPXPXXPXAAXSGXPXQRXRPXRGXLATX 537
R R+ R H + P PPGP G P P + +A
Sbjct: 65 RVARSVFVRRHKKHSQCNCGPQASNCPAGPPGPPGAPGDRGLDGQPGGAGNPGQPGVAGP 124
Query: 538 XPPSPTEXGXHPXXPPGXRASTGPHRTAXPXXHPXARXPPXTXGXAXXXXXXXXXXXXXG 717
E P PG + G P P + G A G
Sbjct: 125 KSHEQQECIKCPAGSPGPAGAPGAPGPQGPNGQPGHPGQGGSQGPA----GPRGPAGDAG 180
Query: 718 XPXRPRAXTTPXXXRTPXTAXHREPXP-GRXGPXRPXPAXXXRPQXSXHQGRXXPAXP 888
P + A P H P P G GP P A +P S QG+ PA P
Sbjct: 181 APGQVGAPGNPGQAGRGGQRSHGLPGPSGAPGPQGPSGA-PGQPGQSGGQGQQGPAGP 237
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 33.9 bits (74), Expect = 0.20
Identities = 26/99 (26%), Positives = 31/99 (31%), Gaps = 2/99 (2%)
Frame = +1
Query: 373 PPTRGHAPTAHXKPXPSXXXXDRXPPGPXPXXPXAAXSGXPXQRXRPXRGXLATXXPPSP 552
PP G P P PS + P GP P P +G PP P
Sbjct: 381 PPQSG--PPGAFAPPPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPP 438
Query: 553 TEXGXHPXXPPGXR--ASTGPHRTAXPXXHPXARXPPXT 663
G + P G + P P +P AR P T
Sbjct: 439 GGPGAYGPPPTGFPPVGAPPPGAAGAPGGNPFARGPSAT 477
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 33.5 bits (73), Expect = 0.26
Identities = 25/91 (27%), Positives = 30/91 (32%), Gaps = 7/91 (7%)
Frame = +1
Query: 418 PSXXXXDRXPPGPXPXXPX--AAXSGXPXQRXRPXRGXLATXXPP-SPTEXGXH----PX 576
P D P P P P A +G P P ++ P +P E G P
Sbjct: 173 PGRPGTDAAPGSPGPRGPPGPAGEAGAPGPAGEPGTPAISEPLTPGAPGEPGDSGPPGPP 232
Query: 577 XPPGXRASTGPHRTAXPXXHPXARXPPXTXG 669
PPG + GP P P PP G
Sbjct: 233 GPPGAPGNDGPPGPPGPKGAPGPDGPPGVDG 263
Score = 32.3 bits (70), Expect = 0.61
Identities = 35/111 (31%), Positives = 39/111 (35%), Gaps = 11/111 (9%)
Frame = +1
Query: 370 TPPTRGHAPTAHXKPX--PSXXXXDRXPPGPXPXXPXAAXSGXPXQRXRPXR-------G 522
TP T G P A +P P + PPGP P P A G P + P R G
Sbjct: 127 TPGTPGKPPVAPCEPTTPPPCKPCPQGPPGP-PGPPGAP--GDPGEAGTPGRPGTDAAPG 183
Query: 523 XLATXXPPSPT-EXGXH-PXXPPGXRASTGPHRTAXPXXHPXARXPPXTXG 669
PP P E G P PG A + P P P PP G
Sbjct: 184 SPGPRGPPGPAGEAGAPGPAGEPGTPAISEPLTPGAP-GEPGDSGPPGPPG 233
Score = 30.7 bits (66), Expect = 1.9
Identities = 19/58 (32%), Positives = 20/58 (34%)
Frame = +2
Query: 731 PGXAXPPXXXEPPXRXXTASPXXADXAPXAPXPXXXXARKXAXTKGAXGPRXPXGTXA 904
PG PP P T D AP +P P A GA GP GT A
Sbjct: 155 PGPPGPPGAPGDPGEAGTPGRPGTDAAPGSPGPRGPPG--PAGEAGAPGPAGEPGTPA 210
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 33.5 bits (73), Expect = 0.26
Identities = 25/91 (27%), Positives = 30/91 (32%), Gaps = 7/91 (7%)
Frame = +1
Query: 418 PSXXXXDRXPPGPXPXXPX--AAXSGXPXQRXRPXRGXLATXXPP-SPTEXGXH----PX 576
P D P P P P A +G P P ++ P +P E G P
Sbjct: 168 PGRPGTDAAPGSPGPRGPPGPAGEAGAPGPAGEPGTPAISEPLTPGAPGEPGDSGPPGPP 227
Query: 577 XPPGXRASTGPHRTAXPXXHPXARXPPXTXG 669
PPG + GP P P PP G
Sbjct: 228 GPPGAPGNDGPPGPPGPKGAPGPDGPPGADG 258
Score = 32.3 bits (70), Expect = 0.61
Identities = 35/111 (31%), Positives = 39/111 (35%), Gaps = 11/111 (9%)
Frame = +1
Query: 370 TPPTRGHAPTAHXKPX--PSXXXXDRXPPGPXPXXPXAAXSGXPXQRXRPXR-------G 522
TP T G P A +P P + PPGP P P A G P + P R G
Sbjct: 122 TPGTPGKPPVAPCEPTTPPPCKPCPQGPPGP-PGPPGAP--GDPGEAGTPGRPGTDAAPG 178
Query: 523 XLATXXPPSPT-EXGXH-PXXPPGXRASTGPHRTAXPXXHPXARXPPXTXG 669
PP P E G P PG A + P P P PP G
Sbjct: 179 SPGPRGPPGPAGEAGAPGPAGEPGTPAISEPLTPGAP-GEPGDSGPPGPPG 228
Score = 30.7 bits (66), Expect = 1.9
Identities = 19/58 (32%), Positives = 20/58 (34%)
Frame = +2
Query: 731 PGXAXPPXXXEPPXRXXTASPXXADXAPXAPXPXXXXARKXAXTKGAXGPRXPXGTXA 904
PG PP P T D AP +P P A GA GP GT A
Sbjct: 150 PGPPGPPGAPGDPGEAGTPGRPGTDAAPGSPGPRGPPG--PAGEAGAPGPAGEPGTPA 205
>U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protein
20 protein.
Length = 288
Score = 33.5 bits (73), Expect = 0.26
Identities = 25/94 (26%), Positives = 29/94 (30%), Gaps = 2/94 (2%)
Frame = +1
Query: 394 PTAHXKPXPSXXXXDRXPPGPXPXXPXAAXSGXPXQRXRPXRGXLATXXPPSPTEXGXHP 573
P H +P P+ R PPGP A G P + P P + G P
Sbjct: 164 PGGHGEPGPAGRGGPRGPPGPGGPQGEAGEDGGAGNPGTPGQVRSLPSPPGEPGQPG-EP 222
Query: 574 XXP--PGXRASTGPHRTAXPXXHPXARXPPXTXG 669
P PG G A P P P G
Sbjct: 223 GGPGEPGADGRPGHPGRAGPPGPPGDNGPNGEPG 256
>U13644-9|AAB52680.3| 492|Caenorhabditis elegans Cell death
abnormality protein 6 protein.
Length = 492
Score = 33.5 bits (73), Expect = 0.26
Identities = 18/71 (25%), Positives = 24/71 (33%)
Frame = +1
Query: 445 PPGPXPXXPXAAXSGXPXQRXRPXRGXLATXXPPSPTEXGXHPXXPPGXRASTGPHRTAX 624
P GP P P ++ P P T S + G P P + +GP +
Sbjct: 260 PQGPPPNIPPSSIYSMPRANDLPPTEMAPTLPQISTSSNGASPSVSPASTSPSGPAPSIP 319
Query: 625 PXXHPXARXPP 657
P P PP
Sbjct: 320 PPRPPALAPPP 330
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 33.5 bits (73), Expect = 0.26
Identities = 25/91 (27%), Positives = 30/91 (32%), Gaps = 7/91 (7%)
Frame = +1
Query: 418 PSXXXXDRXPPGPXPXXPX--AAXSGXPXQRXRPXRGXLATXXPP-SPTEXGXH----PX 576
P D P P P P A +G P P ++ P +P E G P
Sbjct: 168 PGRPGTDAAPGSPGPRGPPGPAGEAGAPGPAGEPGTPAISEPLTPGAPGEPGDSGPPGPP 227
Query: 577 XPPGXRASTGPHRTAXPXXHPXARXPPXTXG 669
PPG + GP P P PP G
Sbjct: 228 GPPGAPGNDGPPGPPGPKGAPGPDGPPGADG 258
Score = 32.3 bits (70), Expect = 0.61
Identities = 35/111 (31%), Positives = 39/111 (35%), Gaps = 11/111 (9%)
Frame = +1
Query: 370 TPPTRGHAPTAHXKPX--PSXXXXDRXPPGPXPXXPXAAXSGXPXQRXRPXR-------G 522
TP T G P A +P P + PPGP P P A G P + P R G
Sbjct: 122 TPGTPGKPPVAPCEPTTPPPCKPCPQGPPGP-PGPPGAP--GDPGEAGTPGRPGTDAAPG 178
Query: 523 XLATXXPPSPT-EXGXH-PXXPPGXRASTGPHRTAXPXXHPXARXPPXTXG 669
PP P E G P PG A + P P P PP G
Sbjct: 179 SPGPRGPPGPAGEAGAPGPAGEPGTPAISEPLTPGAP-GEPGDSGPPGPPG 228
Score = 30.7 bits (66), Expect = 1.9
Identities = 19/58 (32%), Positives = 20/58 (34%)
Frame = +2
Query: 731 PGXAXPPXXXEPPXRXXTASPXXADXAPXAPXPXXXXARKXAXTKGAXGPRXPXGTXA 904
PG PP P T D AP +P P A GA GP GT A
Sbjct: 150 PGPPGPPGAPGDPGEAGTPGRPGTDAAPGSPGPRGPPG--PAGEAGAPGPAGEPGTPA 205
>AF061513-1|AAC24362.1| 492|Caenorhabditis elegans candidate
adaptor protein CED-6 protein.
Length = 492
Score = 33.5 bits (73), Expect = 0.26
Identities = 18/71 (25%), Positives = 24/71 (33%)
Frame = +1
Query: 445 PPGPXPXXPXAAXSGXPXQRXRPXRGXLATXXPPSPTEXGXHPXXPPGXRASTGPHRTAX 624
P GP P P ++ P P T S + G P P + +GP +
Sbjct: 260 PQGPPPNIPPSSIYSMPRANDLPPTEMAPTLPQISTSSNGASPSVSPASTSPSGPAPSIP 319
Query: 625 PXXHPXARXPP 657
P P PP
Sbjct: 320 PPRPPALAPPP 330
>U61948-2|AAB03143.2| 345|Caenorhabditis elegans Collagen protein
14 protein.
Length = 345
Score = 33.1 bits (72), Expect = 0.35
Identities = 36/140 (25%), Positives = 40/140 (28%), Gaps = 9/140 (6%)
Frame = +1
Query: 439 RXPPGPXPXXPXAAXSGXPXQRXRPXRGXLATXXPPSPTEXGXHPXXPPGXRASTGPHRT 618
R PPGP G P G + PP+P H PP P
Sbjct: 155 RGPPGPAGD---GGRDGADGVDGTP--GEIGPPGPPAPPGPDPHSLFPPQCPCEAPPG-D 208
Query: 619 AXPXXHPXARXPPXTXGXAXXXXXXXXXXXXX--------GXPXRPRAXTTPXXXRTPXT 774
P P PP G A G P RP P +T
Sbjct: 209 GGPPGQPGPDGPPGAPGNAGEDGKPGDQGPRGPPGIPGAPGQPGRPGPPGEPGTYKTEVG 268
Query: 775 AXHREPXPGRXG-PXRPXPA 831
R PGR G P +P PA
Sbjct: 269 PAGRAGAPGRPGPPGQPGPA 288
>M25480-1|AAA27986.1| 326|Caenorhabditis elegans collagen protein.
Length = 326
Score = 33.1 bits (72), Expect = 0.35
Identities = 36/140 (25%), Positives = 40/140 (28%), Gaps = 9/140 (6%)
Frame = +1
Query: 439 RXPPGPXPXXPXAAXSGXPXQRXRPXRGXLATXXPPSPTEXGXHPXXPPGXRASTGPHRT 618
R PPGP G P G + PP+P H PP P
Sbjct: 136 RGPPGPAGD---GGRDGADGVDGTP--GEIGPPGPPAPPGPDPHSLFPPQCPCEAPPG-D 189
Query: 619 AXPXXHPXARXPPXTXGXAXXXXXXXXXXXXX--------GXPXRPRAXTTPXXXRTPXT 774
P P PP G A G P RP P +T
Sbjct: 190 GGPPGQPGPDGPPGAPGNAGEDGKPGDQGPRGPPGIPGAPGQPGRPGPPGEPGTYKTEVG 249
Query: 775 AXHREPXPGRXG-PXRPXPA 831
R PGR G P +P PA
Sbjct: 250 PAGRAGAPGRPGPPGQPGPA 269
>Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical
protein T05A1.2 protein.
Length = 300
Score = 32.7 bits (71), Expect = 0.46
Identities = 37/150 (24%), Positives = 44/150 (29%), Gaps = 1/150 (0%)
Frame = +1
Query: 376 PTRGHAPTAHXKPX-PSXXXXDRXPPGPXPXXPXAAXSGXPXQRXRPXRGXLATXXPPSP 552
P R AP A P P + P P P P G P P G + PP P
Sbjct: 118 PGRPGAPGAPGHPGKPPQSPCEPLTPPPCPACPP----GPPGAPGAP--GKPGSEGPPGP 171
Query: 553 TEXGXHPXXPPGXRASTGPHRTAXPXXHPXARXPPXTXGXAXXXXXXXXXXXXXGXPXRP 732
P PG GPH P ++ PP G + P P
Sbjct: 172 PGHDG-PNGGPGQPGQPGPHGPNGHPGKPGSQGPPGPPGHSDEPKPGQPGQPGRAGPRGP 230
Query: 733 RAXTTPXXXRTPXTAXHREPXPGRXGPXRP 822
R + +P P R GP P
Sbjct: 231 RG-VAGIKGKDGAPGSPGQPGP-RGGPGEP 258
>U80451-9|AAB37843.1| 285|Caenorhabditis elegans Collagen protein
73 protein.
Length = 285
Score = 32.7 bits (71), Expect = 0.46
Identities = 36/145 (24%), Positives = 42/145 (28%), Gaps = 5/145 (3%)
Frame = +1
Query: 460 PXXPXAAXSGXPXQRXRPXRGXLATXXPPSPTEXGXHPXXP-----PGXRASTGPHRTAX 624
P P A P + +P PP P +P PG GP+
Sbjct: 115 PGAPGAPGPDAPNEHVQPTPADFCFECPPGPAGNAGNPGPKGPPGQPGAPGEQGPNGRPG 174
Query: 625 PXXHPXARXPPXTXGXAXXXXXXXXXXXXXGXPXRPRAXTTPXXXRTPXTAXHREPXPGR 804
P + PP T G G P +P A P RT PG
Sbjct: 175 APGAPGPQGPPGTAG-------------NDGTPGQPGA---PGQVRTVPAPPGNPGQPGE 218
Query: 805 XGPXRPXPAXXXRPQXSXHQGRXXP 879
G P P RP S QG P
Sbjct: 219 PGAQGP-PGEDGRPGNSGPQGPPGP 242
Score = 28.3 bits (60), Expect = 10.0
Identities = 22/96 (22%), Positives = 29/96 (30%), Gaps = 4/96 (4%)
Frame = +1
Query: 394 PTAHXKPXPSXXXXDRXPPGPXPXXPXAAXSGXPXQRXRPXRGXLATXXPPSPTEXG--- 564
P A + P+ PGP A G P Q P + P +P + G
Sbjct: 161 PGAPGEQGPNGRPGAPGAPGPQGPPGTAGNDGTPGQPGAPGQVRTVPAPPGNPGQPGEPG 220
Query: 565 -XHPXXPPGXRASTGPHRTAXPXXHPXARXPPXTXG 669
P G ++GP P P P G
Sbjct: 221 AQGPPGEDGRPGNSGPQGPPGPQGEPGQDGAPGNPG 256
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 31.9 bits (69), Expect = 0.81
Identities = 36/168 (21%), Positives = 50/168 (29%), Gaps = 6/168 (3%)
Frame = +1
Query: 379 TRGHAPTAHXKPXPSXXXXDRXPPGPXPXX-PXAAXSGXPXQRXRPXR---GXLATXXPP 546
+R +P A + PS + PP P P + S P + P R A+ PP
Sbjct: 366 SRSKSPPARRRRSPSA---SKSPPAPRRRRSPSKSRSPAPKREIPPARRRRSPSASKSPP 422
Query: 547 SPTEXGXHPXXPPGXRASTGPHRTAXPXXHPXARXPPXTXGXAXXXXXXXXXXXXXGXPX 726
+P PP R P ++ P P R P A
Sbjct: 423 APKRAKSRSKSPPAPRRRRSPSQSKSPA--PRRRRSPSKSPQAPRRRRSPSGSKSRSPRR 480
Query: 727 RPRAXTTPXXXRTP--XTAXHREPXPGRXGPXRPXPAXXXRPQXSXHQ 864
R P ++P + R P R P RP+ Q
Sbjct: 481 RRSPAAAPRRRQSPQRRRSPRRRRSPSSSSRSRSPPPPPRRPRQDSEQ 528
>U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protein
34 protein.
Length = 299
Score = 31.9 bits (69), Expect = 0.81
Identities = 38/155 (24%), Positives = 43/155 (27%), Gaps = 7/155 (4%)
Frame = +1
Query: 445 PPGPX--PXXPXAAXS-GXPXQRXRPXRGXLATXXPPSPTEXGXHPXXPPGXRASTGPHR 615
PPGP P P G P P R P +P P PPG GP
Sbjct: 104 PPGPAGTPGKPGRPGKPGAPGLPGNPGRPPQQPCEPITPPPCKPCPQGPPGPPGPPGPPG 163
Query: 616 TAXPXXHPXARXPPXTXGXAXXXXXXXXXXXXXGXPXRPRAXTTPXXXRTPXTAXHREP- 792
+ P G G P P A TP P + P
Sbjct: 164 DSGEPGSPGLPGQDAAPG-------EPGPKGPPGPPGAPGAPGTPGEPGVPAQSEPLIPG 216
Query: 793 ---XPGRXGPXRPXPAXXXRPQXSXHQGRXXPAXP 888
PG GP P P +P G+ P P
Sbjct: 217 EPGPPGEAGPQGP-PGSPGQPGADGSPGQPGPKGP 250
Score = 29.9 bits (64), Expect = 3.3
Identities = 26/91 (28%), Positives = 29/91 (31%), Gaps = 4/91 (4%)
Frame = +1
Query: 409 KPXPSXXXXDRXPPGPXPXXPXAAXSGXPXQRXRPXRGXLATXXPPSPTEXGXHPXXP-- 582
KP P PPGP G P Q P G PP P P P
Sbjct: 146 KPCPQGPPGPPGPPGPPGDSGEPGSPGLPGQDAAP--GEPGPKGPPGPPGAPGAPGTPGE 203
Query: 583 PGXRASTGPHRTAXPXXHPXA--RXPPXTXG 669
PG A + P P A + PP + G
Sbjct: 204 PGVPAQSEPLIPGEPGPPGEAGPQGPPGSPG 234
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.9 bits (69), Expect = 0.81
Identities = 25/85 (29%), Positives = 26/85 (30%), Gaps = 6/85 (7%)
Frame = +1
Query: 373 PPTRGHAPTAHXKPXP----SXXXXDRXPPGPXPXXPXAAXSGXPXQRXRPXRGXLATXX 540
PP G P P P PP P P SG P P G
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 773
Query: 541 PPSP--TEXGXHPXXPPGXRASTGP 609
PP P + G P PPG A P
Sbjct: 774 PPPPGGFKGGPPPPPPPGMFAPMAP 798
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.9 bits (69), Expect = 0.81
Identities = 25/85 (29%), Positives = 26/85 (30%), Gaps = 6/85 (7%)
Frame = +1
Query: 373 PPTRGHAPTAHXKPXP----SXXXXDRXPPGPXPXXPXAAXSGXPXQRXRPXRGXLATXX 540
PP G P P P PP P P SG P P G
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 773
Query: 541 PPSP--TEXGXHPXXPPGXRASTGP 609
PP P + G P PPG A P
Sbjct: 774 PPPPGGFKGGPPPPPPPGMFAPMAP 798
>AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular
collagen RAM-4 protein.
Length = 299
Score = 31.9 bits (69), Expect = 0.81
Identities = 38/155 (24%), Positives = 43/155 (27%), Gaps = 7/155 (4%)
Frame = +1
Query: 445 PPGPX--PXXPXAAXS-GXPXQRXRPXRGXLATXXPPSPTEXGXHPXXPPGXRASTGPHR 615
PPGP P P G P P R P +P P PPG GP
Sbjct: 104 PPGPAGTPGKPGRPGKPGAPGLPGNPGRPPQQPCEPITPPPCKPCPQGPPGPPGPPGPPG 163
Query: 616 TAXPXXHPXARXPPXTXGXAXXXXXXXXXXXXXGXPXRPRAXTTPXXXRTPXTAXHREP- 792
+ P G G P P A TP P + P
Sbjct: 164 DSGEPGSPGLPGQDAAPG-------EPGPKGPPGPPGAPGAPGTPGEPGVPAQSEPLIPG 216
Query: 793 ---XPGRXGPXRPXPAXXXRPQXSXHQGRXXPAXP 888
PG GP P P +P G+ P P
Sbjct: 217 EPGPPGEAGPQGP-PGSPGQPGADGSPGQPGPKGP 250
Score = 29.9 bits (64), Expect = 3.3
Identities = 26/91 (28%), Positives = 29/91 (31%), Gaps = 4/91 (4%)
Frame = +1
Query: 409 KPXPSXXXXDRXPPGPXPXXPXAAXSGXPXQRXRPXRGXLATXXPPSPTEXGXHPXXP-- 582
KP P PPGP G P Q P G PP P P P
Sbjct: 146 KPCPQGPPGPPGPPGPPGDSGEPGSPGLPGQDAAP--GEPGPKGPPGPPGAPGAPGTPGE 203
Query: 583 PGXRASTGPHRTAXPXXHPXA--RXPPXTXG 669
PG A + P P A + PP + G
Sbjct: 204 PGVPAQSEPLIPGEPGPPGEAGPQGPPGSPG 234
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.9 bits (69), Expect = 0.81
Identities = 25/85 (29%), Positives = 26/85 (30%), Gaps = 6/85 (7%)
Frame = +1
Query: 373 PPTRGHAPTAHXKPXP----SXXXXDRXPPGPXPXXPXAAXSGXPXQRXRPXRGXLATXX 540
PP G P P P PP P P SG P P G
Sbjct: 297 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPP 356
Query: 541 PPSP--TEXGXHPXXPPGXRASTGP 609
PP P + G P PPG A P
Sbjct: 357 PPPPGGFKGGPPPPPPPGMFAPMAP 381
>Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical
protein C53B4.5 protein.
Length = 289
Score = 31.5 bits (68), Expect = 1.1
Identities = 20/77 (25%), Positives = 21/77 (27%)
Frame = +1
Query: 445 PPGPXPXXPXAAXSGXPXQRXRPXRGXLATXXPPSPTEXGXHPXXPPGXRASTGPHRTAX 624
PPG G P P R P +P P PPG GP
Sbjct: 97 PPGTPGRAGRPGKPGAPGLNGNPGRPPKEPCEPITPPPCKPCPEGPPGPAGPPGPQGNKG 156
Query: 625 PXXHPXARXPPXTXGXA 675
P P P G A
Sbjct: 157 PLGPPGPPGPEGPNGTA 173
>AC024811-5|AAF60775.1| 285|Caenorhabditis elegans Collagen protein
48 protein.
Length = 285
Score = 31.5 bits (68), Expect = 1.1
Identities = 37/151 (24%), Positives = 44/151 (29%), Gaps = 5/151 (3%)
Frame = +1
Query: 385 GHAPTAHXKPXPSXXXXDRXPPGPXPXXPXAAXSGXPXQRXRPXRGXLATXXPPSPTEXG 564
G P P P DR P P P P A G P + + P +P G
Sbjct: 113 GQGPGEPGPPGPDAELHDRILPVP-PQCPCTAAPGLGGPPGPPGQDGI----PGNPGRNG 167
Query: 565 XHPXXPPGXRASTGPHRTAXPXXHPXARXPPXTXGXAXXXXXXXXXXXXXGXPXRPRAXT 744
PG + +GP P R PP G G P RP A
Sbjct: 168 ED--GAPGPQGPSGPPGPPGQPGQPGQRGPPGEPG--ALLPGGDAPPGPSGPPGRPGAPG 223
Query: 745 TPXXXRTPXTAXHR-----EPXPGRXGPXRP 822
P +P PG+ GP P
Sbjct: 224 QPGKAGSPGQDGSNGDAGVAGEPGQRGPPGP 254
>U53333-6|AAA96159.2| 304|Caenorhabditis elegans Collagen protein
33 protein.
Length = 304
Score = 31.1 bits (67), Expect = 1.4
Identities = 32/93 (34%), Positives = 34/93 (36%)
Frame = +1
Query: 391 APTAHXKPXPSXXXXDRXPPGPXPXXPXAAXSGXPXQRXRPXRGXLATXXPPSPTEXGXH 570
AP A P + PPGP P P G P + RP G A P P E G
Sbjct: 175 APGAPGGDAPPGEAGPKGPPGP-PGSP-----GAPGEPGRP--GDDAPSEPLIPGEPG-- 224
Query: 571 PXXPPGXRASTGPHRTAXPXXHPXARXPPXTXG 669
P PPG P A P P A P T G
Sbjct: 225 PQGPPG------PPGQAGPDGQPGAPGGPGTPG 251
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 31.1 bits (67), Expect = 1.4
Identities = 28/99 (28%), Positives = 33/99 (33%)
Frame = +1
Query: 373 PPTRGHAPTAHXKPXPSXXXXDRXPPGPXPXXPXAAXSGXPXQRXRPXRGXLATXXPPSP 552
PP R H P +P P+ P P AA G + +T PPS
Sbjct: 95 PPHRPH-PHPSRRPRPTRLPRPSRSPHSDAPEPSAATDGFELVFGKHH----STGAPPSG 149
Query: 553 TEXGXHPXXPPGXRASTGPHRTAXPXXHPXARXPPXTXG 669
G P P G S GP P P + PP G
Sbjct: 150 GPPG--PFDPSGAPPSGGPPGLFDPSGAPPSGGPPGPFG 186
>AC084197-24|AAM44390.1| 297|Caenorhabditis elegans Collagen
protein 112 protein.
Length = 297
Score = 31.1 bits (67), Expect = 1.4
Identities = 40/160 (25%), Positives = 46/160 (28%), Gaps = 1/160 (0%)
Frame = +1
Query: 412 PXPSXXXXDRXPPGPXPXXPXAAXSGXPXQRXRPXRGXLATXXPPSPTEXGXHPXXPPGX 591
P P+ PG P P A G P RP + A P +P P PPG
Sbjct: 100 PGPAGPVGTPGKPG-RPGKPGVA--GLPGNPGRPPQ---APCDPITPPPCKPCPQGPPGV 153
Query: 592 RASTGPHRTAXPXXHPXARXPPXTXGXAXXXXXXXXXXXXXGXPXRPRAXTTPXXXRTPX 771
+ GP A P P G G P P P
Sbjct: 154 QGPPGPAGDAGLDGQPGG---PGQDG-QPGQPGPKGPPGVNGQPGAPGQDGNPGQDAPSE 209
Query: 772 TAXHREP-XPGRXGPXRPXPAXXXRPQXSXHQGRXXPAXP 888
EP PG GP P P P + G+ P P
Sbjct: 210 PLVPGEPGAPGEAGPQGP-PGQPGTPGQNGQPGQPGPKGP 248
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 30.7 bits (66), Expect = 1.9
Identities = 29/107 (27%), Positives = 33/107 (30%), Gaps = 8/107 (7%)
Frame = +1
Query: 373 PPTRGHAPTAHXKPXPSXXXXDRXPPGPX--------PXXPXAAXSGXPXQRXRPXRGXL 528
PPT G P +P P PP P P P P + P G +
Sbjct: 278 PPTPGMTP----RPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGM 333
Query: 529 ATXXPPSPTEXGXHPXXPPGXRASTGPHRTAXPXXHPXARXPPXTXG 669
PP G P PP S GP P P +R P G
Sbjct: 334 PPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPP---PPSRPPAPPSG 377
Score = 29.9 bits (64), Expect = 3.3
Identities = 30/142 (21%), Positives = 36/142 (25%), Gaps = 2/142 (1%)
Frame = +1
Query: 409 KPXPSXXXXDRXPPGPXPXXPXAAXSGXPXQRXRPXRGXLATXXPPSPTEXGXHPXXPPG 588
+P P G P P S P P + PP P+ P PP
Sbjct: 244 QPPPLMGMAQSGYQGQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPP 303
Query: 589 XRASTG-PHRTAXPXXHPXAR-XPPXTXGXAXXXXXXXXXXXXXGXPXRPRAXTTPXXXR 762
+ G P P P +R PP G P PR +
Sbjct: 304 PGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMY 363
Query: 763 TPXTAXHREPXPGRXGPXRPXP 828
P P G P P
Sbjct: 364 PPPPPSRPPAPPSGHGMIPPPP 385
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 30.7 bits (66), Expect = 1.9
Identities = 27/93 (29%), Positives = 30/93 (32%)
Frame = +3
Query: 366 PDTXDPWARTHRPXXTRAQXXXARPPPTRPXPXXXRRXXERXPXPKXATXPXXTXHXXTA 545
P D A P R PP P P R R P P+ P T
Sbjct: 113 PQHGDHEASPPPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPR---RPPMTPPSPQR 169
Query: 546 KPHRXGXAPXXPTXPARKHRAXPDSXPXXPPPR 644
+P R +P P P R P S PPPR
Sbjct: 170 RPPRTPPSP-EPRNPPR----TPPSPIPPPPPR 197
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 30.7 bits (66), Expect = 1.9
Identities = 29/107 (27%), Positives = 33/107 (30%), Gaps = 8/107 (7%)
Frame = +1
Query: 373 PPTRGHAPTAHXKPXPSXXXXDRXPPGPX--------PXXPXAAXSGXPXQRXRPXRGXL 528
PPT G P +P P PP P P P P + P G +
Sbjct: 288 PPTPGMTP----RPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGM 343
Query: 529 ATXXPPSPTEXGXHPXXPPGXRASTGPHRTAXPXXHPXARXPPXTXG 669
PP G P PP S GP P P +R P G
Sbjct: 344 PPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPP---PPSRPPAPPSG 387
Score = 29.9 bits (64), Expect = 3.3
Identities = 30/142 (21%), Positives = 36/142 (25%), Gaps = 2/142 (1%)
Frame = +1
Query: 409 KPXPSXXXXDRXPPGPXPXXPXAAXSGXPXQRXRPXRGXLATXXPPSPTEXGXHPXXPPG 588
+P P G P P S P P + PP P+ P PP
Sbjct: 254 QPPPLMGMAQSGYQGQYPPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPP 313
Query: 589 XRASTG-PHRTAXPXXHPXAR-XPPXTXGXAXXXXXXXXXXXXXGXPXRPRAXTTPXXXR 762
+ G P P P +R PP G P PR +
Sbjct: 314 PGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMY 373
Query: 763 TPXTAXHREPXPGRXGPXRPXP 828
P P G P P
Sbjct: 374 PPPPPSRPPAPPSGHGMIPPPP 395
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 29.9 bits (64), Expect = 3.3
Identities = 25/103 (24%), Positives = 33/103 (32%)
Frame = +3
Query: 333 PXXXRRAXTXXPDTXDPWARTHRPXXTRAQXXXARPPPTRPXPXXXRRXXERXPXPKXAT 512
P R T P T P A T P TRA R PP P + R P +
Sbjct: 293 PQPPPRGSTAAPGTRAPPA-TRAPPATRAPPATTRAPPATTRPAPASQPPVREPETPDSG 351
Query: 513 XPXXTXHXXTAKPHRXGXAPXXPTXPARKHRAXPDSXPXXPPP 641
P +P + P+ P+ + + P P P
Sbjct: 352 YPSPAPQ----EPAHPSPSYPSPSYPSPSYPSPSYPSPSYPSP 390
Score = 29.5 bits (63), Expect = 4.3
Identities = 32/146 (21%), Positives = 38/146 (26%)
Frame = +1
Query: 394 PTAHXKPXPSXXXXDRXPPGPXPXXPXAAXSGXPXQRXRPXRGXLATXXPPSPTEXGXHP 573
P H +P + PG A G P Q +P P P
Sbjct: 225 PGQHGEPGKDGEEGPQGAPGTPGNAGHDAFPGTPGQAGKPGAPGKDANYCPCPQRQDDRT 284
Query: 574 XXPPGXRASTGPHRTAXPXXHPXARXPPXTXGXAXXXXXXXXXXXXXGXPXRPRAXTTPX 753
G A P R + P R PP T RP + P
Sbjct: 285 PPSSGTSAPQPPPRGSTAA--PGTRAPPATRAPPATRAPPATTRAPPA-TTRPAPASQP- 340
Query: 754 XXRTPXTAXHREPXPGRXGPXRPXPA 831
R P T P P P P P+
Sbjct: 341 PVREPETPDSGYPSPAPQEPAHPSPS 366
Score = 29.5 bits (63), Expect = 4.3
Identities = 22/80 (27%), Positives = 25/80 (31%), Gaps = 1/80 (1%)
Frame = +1
Query: 244 PXRDXTRHGXSXXRHQPTXXXRXXXXXPXSXXXXAARXRXX-RTPPTRGHAPTAHXKPXP 420
P R R S P R P + A R R PP AP A +P P
Sbjct: 277 PQRQDDRTPPSSGTSAPQPPPRGSTAAPGTRAPPATRAPPATRAPPATTRAPPATTRPAP 336
Query: 421 SXXXXDRXPPGPXPXXPXAA 480
+ R P P P A
Sbjct: 337 ASQPPVREPETPDSGYPSPA 356
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 29.9 bits (64), Expect = 3.3
Identities = 32/146 (21%), Positives = 40/146 (27%)
Frame = +1
Query: 376 PTRGHAPTAHXKPXPSXXXXDRXPPGPXPXXPXAAXSGXPXQRXRPXRGXLATXXPPSPT 555
P +G A K P PPGP A +G + P + PP P+
Sbjct: 135 PGKGAAVPCEAKTPPPCKPCPAGPPGPPGPDGPAGPAGPDGEAGSP--AAPSPPGPPGPS 192
Query: 556 EXGXHPXXPPGXRASTGPHRTAXPXXHPXARXPPXTXGXAXXXXXXXXXXXXXGXPXRPR 735
P G + GP A +P P G A P
Sbjct: 193 GPAG-PAGNDGAAGTPGPDGPAGESTYP----EPAAPGPAGPPGPAGPPGPDGASPTAAP 247
Query: 736 AXTTPXXXRTPXTAXHREPXPGRXGP 813
P P A + PG GP
Sbjct: 248 GAAGPPGPPGPAGAPGPDGNPGTAGP 273
Score = 29.1 bits (62), Expect = 5.7
Identities = 39/155 (25%), Positives = 45/155 (29%), Gaps = 7/155 (4%)
Frame = +1
Query: 445 PPGPX--PXXPXAAXS-GXPXQRXRPXRGXLATXXPPSPTEXGXHPXXPPGXRASTGPHR 615
PPG P P G P P +G +P P PPG GP
Sbjct: 110 PPGVAGNPGKPGKPGKPGAPGNPGAPGKGAAVPCEAKTPPPCKPCPAGPPGPPGPDGPAG 169
Query: 616 TAXPXXH---PXARXPPXTXGXAXXXXXXXXXXXXXGXPXRPRAXTTPXXXRTPXTAXHR 786
A P P A PP G + G A TP + +
Sbjct: 170 PAGPDGEAGSPAAPSPPGPPGPS----------GPAGPAGNDGAAGTPGPDGPAGESTYP 219
Query: 787 EP-XPGRXGPXRPXPAXXXRPQXSXHQGRXXPAXP 888
EP PG GP P PA P + A P
Sbjct: 220 EPAAPGPAGP--PGPAGPPGPDGASPTAAPGAAGP 252
>Z49938-2|CAA90187.1| 306|Caenorhabditis elegans Hypothetical
protein F38A3.1 protein.
Length = 306
Score = 29.9 bits (64), Expect = 3.3
Identities = 24/100 (24%), Positives = 31/100 (31%)
Frame = +1
Query: 376 PTRGHAPTAHXKPXPSXXXXDRXPPGPXPXXPXAAXSGXPXQRXRPXRGXLATXXPPSPT 555
P + AP +P S PPGP G P Q +P + + P +P
Sbjct: 173 PGQAGAPGNDGRPGQSGGAAIPGPPGPPGPSGQPGQDGHPGQDGQPGQPGESREVPGAP- 231
Query: 556 EXGXHPXXPPGXRASTGPHRTAXPXXHPXARXPPXTXGXA 675
P PG + GP P P G A
Sbjct: 232 ----GPAGQPGSQGEPGPSGPDGRPGQPGQAGQPGGPGDA 267
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 29.9 bits (64), Expect = 3.3
Identities = 17/61 (27%), Positives = 17/61 (27%)
Frame = +1
Query: 445 PPGPXPXXPXAAXSGXPXQRXRPXRGXLATXXPPSPTEXGXHPXXPPGXRASTGPHRTAX 624
PPGP G P P R PP P PPG GP
Sbjct: 115 PPGPPGRDGRPGAPGRPGNPGPPGRDGALLPGPPPKPPCQKCPPGPPGPAGPPGPKGLPG 174
Query: 625 P 627
P
Sbjct: 175 P 175
>M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen
protein.
Length = 298
Score = 29.9 bits (64), Expect = 3.3
Identities = 34/151 (22%), Positives = 39/151 (25%), Gaps = 3/151 (1%)
Frame = +1
Query: 445 PPGPX--PXXPXAAXS-GXPXQRXRPXRGXLATXXPPSPTEXGXHPXXPPGXRASTGPHR 615
PPGP P P G P P R P +P P PPG GP
Sbjct: 104 PPGPAGTPGKPGRPGKPGAPGLPGNPGRPPQQPCEPITPPPWKPCPQGPPGPPGPPGPPG 163
Query: 616 TAXPXXHPXARXPPXTXGXAXXXXXXXXXXXXXGXPXRPRAXTTPXXXRTPXTAXHREPX 795
+ P G G P P + R
Sbjct: 164 DSGEPGSPGLPGQDAAPG----EPGPKGPKGPPGAPGAPEHQESQECPRGEPLIPGEPGP 219
Query: 796 PGRXGPXRPXPAXXXRPQXSXHQGRXXPAXP 888
PG GP P P +P G+ P P
Sbjct: 220 PGEAGPQGP-PGSPGQPGADGSPGQPGPKGP 249
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 29.9 bits (64), Expect = 3.3
Identities = 19/75 (25%), Positives = 20/75 (26%)
Frame = +1
Query: 445 PPGPXPXXPXAAXSGXPXQRXRPXRGXLATXXPPSPTEXGXHPXXPPGXRASTGPHRTAX 624
PPG G P P R P +P P PPG GP
Sbjct: 99 PPGTPGSAGRPGKPGAPGLNGNPGRPPKEPCEPLTPPPCKPCPEGPPGPAGPPGPDGNKG 158
Query: 625 PXXHPXARXPPXTXG 669
P P P G
Sbjct: 159 PLGPPGPPGPEGPNG 173
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 29.9 bits (64), Expect = 3.3
Identities = 15/60 (25%), Positives = 23/60 (38%)
Frame = +1
Query: 448 PGPXPXXPXAAXSGXPXQRXRPXRGXLATXXPPSPTEXGXHPXXPPGXRASTGPHRTAXP 627
P P P P + +P + P P+ +P P +S+GP +TA P
Sbjct: 547 PAPQPSPSSPVYGPTPSEPAKPSMPSGESPAQPEPSIPAVNPEPSPSQPSSSGPIQTAPP 606
>Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical
protein Y49E10.29 protein.
Length = 559
Score = 29.5 bits (63), Expect = 4.3
Identities = 27/109 (24%), Positives = 37/109 (33%), Gaps = 10/109 (9%)
Frame = +1
Query: 367 RTPPTRGHAPTAHXKPXPSXXXXDRXPPGPXP--------XXPXAAXS-GXPXQRXRPXR 519
+ PP R + P + PS + PP P P P S P Q+ +P
Sbjct: 373 QAPPVRQNPPMPAVQQAPSSQQATQAPPKPAPQQAPPVQQNPPKPTPSPAPPAQKAQPVT 432
Query: 520 GXLATXXPPSPTEXGXHPXXPPGXRASTGP-HRTAXPXXHPXARXPPXT 663
A+ P SP+ P P +S P + P P P T
Sbjct: 433 QQQASAPPTSPSAPVQAPNTPTQKASSQDPIVQQDPPPKEPSISSEPTT 481
>Z68753-3|CAA92988.3| 984|Caenorhabditis elegans Hypothetical
protein ZC518.2 protein.
Length = 984
Score = 29.1 bits (62), Expect = 5.7
Identities = 18/67 (26%), Positives = 23/67 (34%)
Frame = +1
Query: 373 PPTRGHAPTAHXKPXPSXXXXDRXPPGPXPXXPXAAXSGXPXQRXRPXRGXLATXXPPSP 552
PP+ G A + P PS R P P P A Q+ R PP+
Sbjct: 138 PPSVGSAAPSIQPPIPSALASARPAPFPAAQPPPAPTPTPSYQQQMAPRPQAPAAYPPAS 197
Query: 553 TEXGXHP 573
+ G P
Sbjct: 198 QQQGYPP 204
>Z35719-1|CAA84800.1| 296|Caenorhabditis elegans Hypothetical
protein F17C8.2 protein.
Length = 296
Score = 29.1 bits (62), Expect = 5.7
Identities = 21/92 (22%), Positives = 27/92 (29%), Gaps = 1/92 (1%)
Frame = +1
Query: 541 PPSPTEXGXH-PXXPPGXRASTGPHRTAXPXXHPXARXPPXTXGXAXXXXXXXXXXXXXG 717
P +P + G P PPG +GP+ A P P A G G
Sbjct: 170 PGAPGDAGKDGPPGPPGPDGDSGPNGEAGPNGEPGAPGKDGEKGKGEPGPAGPPGPPGPG 229
Query: 718 XPXRPRAXTTPXXXRTPXTAXHREPXPGRXGP 813
P P ++ PG GP
Sbjct: 230 GPPGDAGGAGSDGAPGPQGPPGQDGTPGNAGP 261
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 29.1 bits (62), Expect = 5.7
Identities = 13/39 (33%), Positives = 16/39 (41%)
Frame = +1
Query: 541 PPSPTEXGXHPXXPPGXRASTGPHRTAXPXXHPXARXPP 657
PP P + P PPG + GP+ P A PP
Sbjct: 707 PPQPQQPPQGPPGPPGPQQHPGPYPGYPGYGPPGAMRPP 745
>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 29.1 bits (62), Expect = 5.7
Identities = 39/186 (20%), Positives = 51/186 (27%), Gaps = 7/186 (3%)
Frame = +1
Query: 376 PTRGHAPTAHXKPXPSXXXXDRXPPGPXPXXP----XAAXSGXPXQRXRPXRGXLATXXP 543
P + P+ KP PS P P P P + SG P P
Sbjct: 965 PNGPNGPSDPNKPGPSGPNGPSDPNKPSPNGPSDPVKPSPSGPSPNGPSPNGPSPNGPSP 1024
Query: 544 PSPTEXGXHPXXP-PGXRASTGPHRTAXPXXHPXARXPPXTXGXAXXXXXXXXXXXXXGX 720
P+ G P P P + GP+ + P P P
Sbjct: 1025 NGPSPNGPTPNWPSPNGPSPNGPNGPSDP-NKPGPNGPNGPSDPNKPGPNGPNEPSDPNK 1083
Query: 721 PXRPRAXTTPXXXRTPXTAXHREP-XPGRXGPXRP-XPAXXXRPQXSXHQGRXXPAXPXX 894
P P P P EP P + GP P P+ +P + P P
Sbjct: 1084 PG-PNGPNGPSDPNKPGPNGPNEPSDPNKPGPNGPNGPSDPNKPGPNGPNEPSDPNKPGP 1142
Query: 895 HXSXXP 912
+ P
Sbjct: 1143 NGPNGP 1148
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 29.1 bits (62), Expect = 5.7
Identities = 38/167 (22%), Positives = 43/167 (25%), Gaps = 3/167 (1%)
Frame = +1
Query: 397 TAHXKPXPSXXXXDRXPPGPXPXXPXAAXSGXPXQRXRPXRGXLATXXPPSPTEXGXHPX 576
TA +P P PP P + G +R P T PP PT
Sbjct: 28 TASRRPPPPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPPKGTGT-PPPPPTGEPQDLS 86
Query: 577 XPPG---XRASTGPHRTAXPXXHPXARXPPXTXGXAXXXXXXXXXXXXXGXPXRPRAXTT 747
G R P T P P P G G P P
Sbjct: 87 AEEGNASRRPPPPPKGTGTPPPPPTGE-PQDLSGEGNASRRPPPPPKGTGSPPPPPTG-E 144
Query: 748 PXXXRTPXTAXHREPXPGRXGPXRPXPAXXXRPQXSXHQGRXXPAXP 888
P A R P P + G P P PQ +G P
Sbjct: 145 PQDLSGEGNASRRPPPPPK-GTGSPPPPPTGEPQDLSTEGNASRRPP 190
>Z70207-1|CAA94128.1| 291|Caenorhabditis elegans Hypothetical
protein F15A2.1 protein.
Length = 291
Score = 28.7 bits (61), Expect = 7.5
Identities = 20/77 (25%), Positives = 24/77 (31%)
Frame = +1
Query: 388 HAPTAHXKPXPSXXXXDRXPPGPXPXXPXAAXSGXPXQRXRPXRGXLATXXPPSPTEXGX 567
HA A P P + PPGP +G P P + P+ E
Sbjct: 137 HAAEADCIPCPGG---EAGPPGPDGEPGVRGPNGPPGPNGHPGQPGRPGPAGPAGPEGKD 193
Query: 568 HPXXPPGXRASTGPHRT 618
P P G GP T
Sbjct: 194 GPVGPHGPAGPAGPRGT 210
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 28.7 bits (61), Expect = 7.5
Identities = 25/101 (24%), Positives = 30/101 (29%), Gaps = 2/101 (1%)
Frame = +1
Query: 373 PPTRGHAPTAHXKPXPSXXXXDRXPPGPXPXXPXAAXSGXPXQRXRPXRGXLATXXPPSP 552
PP P P P+ PGP A G Q +P G +
Sbjct: 172 PPGPDGTPGEPGGPGPAGSPAGPSGPGPAGPPGPAGPPGNDGQPGQPG-GPGQDGASSAG 230
Query: 553 TEXGXHPXXPPGXRASTGP--HRTAXPXXHPXARXPPXTXG 669
E G P PPG GP + P + PP G
Sbjct: 231 GEAGPGPAGPPGPAGPAGPDGQSGSGSAGGPGPKGPPGPAG 271
>Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical
protein C09G5.5 protein.
Length = 317
Score = 28.7 bits (61), Expect = 7.5
Identities = 33/149 (22%), Positives = 40/149 (26%), Gaps = 1/149 (0%)
Frame = +1
Query: 445 PPGPXPXXPXAAXSGXPXQRXRPXRGXLATXXPPSPTEXGXHPXXPPGXRASTGPHRTAX 624
PPGP G P +P + +A E P PG + G
Sbjct: 93 PPGPPGASGDRGLDGQPGPAGKPGQPGVAGPAHHQQQECIKCPQGAPGPAGAPGNPGPQG 152
Query: 625 PXXHPXARXPPXTXGXAXXXXXXXXXXXXXGXPXRPRAXTTPXXXRTPXTAXHREPXP-G 801
P +P A G G P + A P P P G
Sbjct: 153 PNGNPGA----PAHGGGQGPPGPPGPAGDAGSPGQAGAPGNPGRPGQSGQRSRGLPGPSG 208
Query: 802 RXGPXRPXPAXXXRPQXSXHQGRXXPAXP 888
R GP P P +P G P P
Sbjct: 209 RPGPQGP-PGAPGQPGSGSTPGPAGPPGP 236
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 28.7 bits (61), Expect = 7.5
Identities = 20/71 (28%), Positives = 23/71 (32%)
Frame = +1
Query: 373 PPTRGHAPTAHXKPXPSXXXXDRXPPGPXPXXPXAAXSGXPXQRXRPXRGXLATXXPPSP 552
PP G P P P PP P P G P Q+ RP PP P
Sbjct: 673 PPGGGQGPP----PPPQGQQYYGGPP--PPGQPYGPPGGYPPQQQRPPYQAQPYPGPPPP 726
Query: 553 TEXGXHPXXPP 585
+ + PP
Sbjct: 727 QQQRGYGYPPP 737
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 28.7 bits (61), Expect = 7.5
Identities = 20/71 (28%), Positives = 23/71 (32%)
Frame = +1
Query: 373 PPTRGHAPTAHXKPXPSXXXXDRXPPGPXPXXPXAAXSGXPXQRXRPXRGXLATXXPPSP 552
PP G P P P PP P P G P Q+ RP PP P
Sbjct: 673 PPGGGQGPP----PPPQGQQYYGGPP--PPGQPYGPPGGYPPQQQRPPYQAQPYPGPPPP 726
Query: 553 TEXGXHPXXPP 585
+ + PP
Sbjct: 727 QQQRGYGYPPP 737
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 28.7 bits (61), Expect = 7.5
Identities = 34/149 (22%), Positives = 39/149 (26%), Gaps = 1/149 (0%)
Frame = +1
Query: 445 PPGPXPXXPXAAXSGXPXQRXRPXRGXLATXXPPSPTEXGXHPXXPPGXRASTGPHRTAX 624
PPGP A G P +P A S G P G GP A
Sbjct: 141 PPGPRGPPGQAGLDGLPGAPGQPGSNGGAGSNGASEGSAGGCKTCPAGPPGPPGPAGQAG 200
Query: 625 PXXHPXARXPPXTXGXAXXXXXXXXXXXXXGXPXRPRAXTTP-XXXRTPXTAXHREPXPG 801
+ P + G G P +P A P + R PG
Sbjct: 201 RPGNDGQPGAP-SFGGGVGAPGAPGPAGDAGSPGQPGAPGQPGRPGKNAQGGSSRPGPPG 259
Query: 802 RXGPXRPXPAXXXRPQXSXHQGRXXPAXP 888
GP P P P G P P
Sbjct: 260 PAGPPGP-PGNNGAPGGGYGVGPPGPPGP 287
Score = 28.7 bits (61), Expect = 7.5
Identities = 21/79 (26%), Positives = 22/79 (27%), Gaps = 5/79 (6%)
Frame = +1
Query: 448 PGPXPXXPXAAXSGXPXQRXRPXRGXLATXXPPSPTEXGXHPXXP-----PGXRASTGPH 612
PGP G P Q RP + P P P P PG GP
Sbjct: 223 PGPAGDAGSPGQPGAPGQPGRPGKNAQGGSSRPGPPGPAGPPGPPGNNGAPGGGYGVGPP 282
Query: 613 RTAXPXXHPXARXPPXTXG 669
P P A P G
Sbjct: 283 GPPGPSGRPGAPGQPGPDG 301
>Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical
protein Y41E3.2 protein.
Length = 289
Score = 28.3 bits (60), Expect = 10.0
Identities = 20/86 (23%), Positives = 25/86 (29%), Gaps = 2/86 (2%)
Frame = +1
Query: 418 PSXXXXDRXPPGPXPXXPXAAXSGXPXQRXRPXRGXLATXXPPSPT-EXGXH-PXXPPGX 591
P + P GP +G P + P + A PP P + G P PPG
Sbjct: 166 PDAAPGEPGPKGPIGPPGPPGQAGAPGEPGSPAKSEPAVPGPPGPPGQAGQQGPPGPPGS 225
Query: 592 RASTGPHRTAXPXXHPXARXPPXTXG 669
G P P G
Sbjct: 226 NGIDGAPGAPGAKGEPGTPGEPGKDG 251
>Z74042-8|CAA98525.1| 299|Caenorhabditis elegans Hypothetical
protein T11F9.9 protein.
Length = 299
Score = 28.3 bits (60), Expect = 10.0
Identities = 35/149 (23%), Positives = 39/149 (26%), Gaps = 2/149 (1%)
Frame = +1
Query: 448 PGPXPXXPXAAXS-GXPXQRXRPXRGXLATXXPPSPTEXGXHPXXPPGXRASTGPHRTAX 624
P P P G P P R P +P P PPG GP A
Sbjct: 107 PAGTPGKPGRPGKPGAPGLPGNPGRPPQQPCDPITPPPCQPCPQGPPGPPGPPGPSGDAG 166
Query: 625 PXXHPXARXPPXTXGXAXXXXXXXXXXXXXGXPXRPRAXTTPXXXRTPXTAXHREPXP-G 801
+P + P G G P P A P P P G
Sbjct: 167 SNGNPGS---PGQDG-QPGAPGNKGPSGQNGNPGAPGAPGQPGQDAPSEPITPGAPGPQG 222
Query: 802 RXGPXRPXPAXXXRPQXSXHQGRXXPAXP 888
GP P P +P G P P
Sbjct: 223 APGPQGP-PGQPGQPGHDGQPGAPGPKGP 250
>Z74036-2|CAA98487.1| 266|Caenorhabditis elegans Hypothetical
protein F55C10.3 protein.
Length = 266
Score = 28.3 bits (60), Expect = 10.0
Identities = 24/91 (26%), Positives = 28/91 (30%), Gaps = 4/91 (4%)
Frame = +1
Query: 409 KPXPSXXXXDRXPPGPXPXXPXAAXSGXPXQRXRPXRGXLATXXPPSPTEXGXHPXXP-- 582
+P P PPGP G P Q +P G P P P P
Sbjct: 113 QPCPQGPPGPPGPPGPSGDAGGNGNPGSPGQDGQP--GAPGNKGPSGPNGNPGAPGAPGQ 170
Query: 583 PGXRASTGPHRTAXPXXH--PXARXPPXTXG 669
PG A + P P P + PP G
Sbjct: 171 PGQDAPSEPITPGAPGPQGTPGPQGPPGQPG 201
>Z74036-1|CAA98486.1| 299|Caenorhabditis elegans Hypothetical
protein F55C10.2 protein.
Length = 299
Score = 28.3 bits (60), Expect = 10.0
Identities = 24/91 (26%), Positives = 28/91 (30%), Gaps = 4/91 (4%)
Frame = +1
Query: 409 KPXPSXXXXDRXPPGPXPXXPXAAXSGXPXQRXRPXRGXLATXXPPSPTEXGXHPXXP-- 582
+P P PPGP G P Q +P G P P P P
Sbjct: 146 QPCPQGPPGPPGPPGPSGDAGGNGNPGSPGQDGQP--GAPGNKGPSGPNGNPGAPGAPGQ 203
Query: 583 PGXRASTGPHRTAXPXXH--PXARXPPXTXG 669
PG A + P P P + PP G
Sbjct: 204 PGQDAPSEPITPGAPGPQGTPGPQGPPGQPG 234
>Z68335-1|CAA92729.1| 299|Caenorhabditis elegans Hypothetical
protein C29F4.1 protein.
Length = 299
Score = 28.3 bits (60), Expect = 10.0
Identities = 18/69 (26%), Positives = 20/69 (28%)
Frame = +2
Query: 731 PGXAXPPXXXEPPXRXXTASPXXADXAPXAPXPXXXXARKXAXTKGAXGPRXPXGTXARX 910
PG P + P AP AP A T GA GP P G +
Sbjct: 171 PGAPGQDGQPGAPGNKGPSGPNGNPGAPGAPGQPGQDAPSEPITPGAPGPAGPAGPQGQP 230
Query: 911 QXPXPAXXD 937
P D
Sbjct: 231 GAPGQPGHD 239
>L15419-1|AAA17726.1| 308|Caenorhabditis elegans col-40 collagen
protein.
Length = 308
Score = 28.3 bits (60), Expect = 10.0
Identities = 21/80 (26%), Positives = 24/80 (30%), Gaps = 3/80 (3%)
Frame = +1
Query: 445 PPGPXPXXPXAAXSGXPXQRXRPXRGXLATXXPPSPTEXGXHP--XXPPGXRASTGP-HR 615
P GP P P P RG + PP P +P PG + G
Sbjct: 170 PGGPGPPGPPGPEGAPGEDGNTPSRGGVGEAGPPGPPGTSGNPGTDGAPGNPGAPGQVTE 229
Query: 616 TAXPXXHPXARXPPXTXGXA 675
T A PP G A
Sbjct: 230 TPGTPGPAGAAGPPGPPGPA 249
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.313 0.134 0.446
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,324,510
Number of Sequences: 27780
Number of extensions: 171425
Number of successful extensions: 649
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 321
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 548
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2877115450
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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