Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_P12
         (925 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    23   3.9  
DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate r...    23   5.2  
DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex det...    23   5.2  
DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex det...    23   5.2  
DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex det...    23   5.2  
DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex det...    23   5.2  
DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex det...    23   5.2  
DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex det...    23   5.2  
AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate r...    23   5.2  
AB006152-1|BAA24504.1|  178|Apis mellifera inositol 1,4,5-tripho...    23   5.2  

>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 3.9
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = -3

Query: 278 CLCHFCGSRRFCCF 237
           C C  C S+  CCF
Sbjct: 435 CECKTCNSKTKCCF 448


>DQ468657-1|ABE02558.1|  322|Apis mellifera 1,4,5-trisphosphate
           receptor protein.
          Length = 322

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +1

Query: 571 PVRAAKLHLLYIHYNFHYPFLQVDKYIILHV 663
           P+ +  LHLL+ H++     LQ  K + L V
Sbjct: 141 PLVSGALHLLFRHFSQRQEVLQAFKQVQLLV 171


>DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -2

Query: 741 NNNYTFIKLENNNEKQ 694
           +NNY +    NNN KQ
Sbjct: 86  SNNYNYSNYNNNNYKQ 101


>DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -2

Query: 741 NNNYTFIKLENNNEKQ 694
           +NNY +    NNN KQ
Sbjct: 86  SNNYNYSNYNNNNYKQ 101


>DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -2

Query: 741 NNNYTFIKLENNNEKQ 694
           +NNY +    NNN KQ
Sbjct: 86  SNNYNYSNYNNNNYKQ 101


>DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -2

Query: 741 NNNYTFIKLENNNEKQ 694
           +NNY +    NNN KQ
Sbjct: 86  SNNYNYSNYNNNNYKQ 101


>DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -2

Query: 741 NNNYTFIKLENNNEKQ 694
           +NNY +    NNN KQ
Sbjct: 86  SNNYNYSNYNNNNYKQ 101


>DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -2

Query: 741 NNNYTFIKLENNNEKQ 694
           +NNY +    NNN KQ
Sbjct: 86  SNNYNYSNYNNNNYKQ 101


>AY331183-1|AAP94623.1|  953|Apis mellifera NMDA-type glutamate
           receptor 1 protein.
          Length = 953

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = +3

Query: 807 VFXRELTFDXVC*XTXILTXHLNI 878
           V+ RE+ F   C    IL  H N+
Sbjct: 425 VYVREIAFSESCLPEEILCPHFNV 448


>AB006152-1|BAA24504.1|  178|Apis mellifera inositol
           1,4,5-triphosphate recepter protein.
          Length = 178

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +1

Query: 571 PVRAAKLHLLYIHYNFHYPFLQVDKYIILHV 663
           P+ +  LHLL+ H++     LQ  K + L V
Sbjct: 109 PLVSGALHLLFRHFSQRQEVLQAFKQVQLLV 139


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 210,017
Number of Sequences: 438
Number of extensions: 3952
Number of successful extensions: 17
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30113811
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)