Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_P11
(945 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein pr... 24 2.0
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 23 3.5
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 23 3.5
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 23 3.5
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 23 3.5
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 23 4.6
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 23 4.6
AY490815-1|AAR82970.1| 136|Tribolium castaneum glass protein pr... 23 4.6
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 22 6.0
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 22 6.0
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 22 6.0
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 22 6.0
>AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein
protein.
Length = 392
Score = 23.8 bits (49), Expect = 2.0
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +2
Query: 113 ICLR*SNRPPTSKQHLSTHGFPNQNQTRHCYQSY 214
IC + RP T K HL TH + C +S+
Sbjct: 254 ICGKSYARPSTLKTHLRTHSGEKPYRCIDCNKSF 287
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 23.0 bits (47), Expect = 3.5
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -1
Query: 72 RKWQPTTIXNLKDSL 28
R+W P+TI N+ D L
Sbjct: 878 RRWVPSTIANIMDLL 892
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 23.0 bits (47), Expect = 3.5
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -1
Query: 72 RKWQPTTIXNLKDSL 28
R+W P+TI N+ D L
Sbjct: 878 RRWVPSTIANIMDLL 892
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 23.0 bits (47), Expect = 3.5
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -1
Query: 72 RKWQPTTIXNLKDSL 28
R+W P+TI N+ D L
Sbjct: 878 RRWVPSTIANIMDLL 892
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 23.0 bits (47), Expect = 3.5
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -1
Query: 72 RKWQPTTIXNLKDSL 28
R+W P+TI N+ D L
Sbjct: 878 RRWVPSTIANIMDLL 892
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 22.6 bits (46), Expect = 4.6
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = -1
Query: 114 IAYYYLAVSWIYFNRKWQPTTIXNLKD 34
I +L++ W +N KW + +KD
Sbjct: 51 ITNIWLSLEWNDYNLKWNESEYGGVKD 77
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 22.6 bits (46), Expect = 4.6
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = -1
Query: 114 IAYYYLAVSWIYFNRKWQPTTIXNLKD 34
I +L++ W +N KW + +KD
Sbjct: 51 ITNIWLSLEWNDYNLKWNESEYGGVKD 77
>AY490815-1|AAR82970.1| 136|Tribolium castaneum glass protein
protein.
Length = 136
Score = 22.6 bits (46), Expect = 4.6
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = +2
Query: 134 RPPTSKQHLSTHGFPNQNQTRHCYQSY 214
RP T K HL TH + C +S+
Sbjct: 5 RPSTLKTHLRTHSGEKPYRCIDCNKSF 31
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 22.2 bits (45), Expect = 6.0
Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Frame = +3
Query: 198 TATKVTWTSTVARK-FAAKNTNHATISRECTGLSAPMSGSTSGTTSAPKA 344
T T WT+T R+ + T +T +R T + T GTT P A
Sbjct: 1046 TTTSPWWTTTTTRRTTTTRPTTTSTTTRPTT-----TNWPTQGTTIPPPA 1090
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 22.2 bits (45), Expect = 6.0
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -1
Query: 72 RKWQPTTIXNLKDSL 28
R+W P+T+ N+ D L
Sbjct: 618 RRWMPSTMANILDLL 632
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 22.2 bits (45), Expect = 6.0
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -1
Query: 72 RKWQPTTIXNLKDSL 28
R+W P+T+ N+ D L
Sbjct: 851 RRWMPSTMANILDLL 865
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 22.2 bits (45), Expect = 6.0
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -1
Query: 72 RKWQPTTIXNLKDSL 28
R+W P+T+ N+ D L
Sbjct: 851 RRWMPSTMANILDLL 865
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,719
Number of Sequences: 336
Number of extensions: 2278
Number of successful extensions: 17
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 26582281
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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