BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP16_F_P11
(945 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF487534-1|AAL93295.1| 509|Anopheles gambiae cytochrome P450 CY... 25 4.4
AY536865-1|AAT07965.1| 650|Anopheles gambiae tryptophan transpo... 24 5.8
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p... 24 5.8
AJ626713-1|CAF25029.1| 650|Anopheles gambiae tryptophan transpo... 24 5.8
AJ439060-12|CAD27763.1| 450|Anopheles gambiae putative tachykin... 24 5.8
DQ230893-2|ABD94312.1| 525|Anopheles gambiae iduronate 2-sulfat... 24 7.7
>AF487534-1|AAL93295.1| 509|Anopheles gambiae cytochrome P450
CYP6P3 protein.
Length = 509
Score = 24.6 bits (51), Expect = 4.4
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2
Query: 182 QNQTRHCYQSYVDFHRCQKVRGEKY 256
Q QTRH + + +R K RGE+Y
Sbjct: 50 QAQTRHGADIHQELYRYFKQRGERY 74
>AY536865-1|AAT07965.1| 650|Anopheles gambiae tryptophan
transporter protein.
Length = 650
Score = 24.2 bits (50), Expect = 5.8
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -3
Query: 409 LKQIEIN*SIGNV*DLNPTG-EGAFGALVVPLVDPLIGAERPVHSLEIV 266
L I ++ +GNV T E GA V+P + L+ RP++ LE++
Sbjct: 86 LSCIALSVGLGNVWRFPFTALENGGGAFVIPYLIVLLLVGRPIYYLEML 134
>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/proton
exchanger 3 protein.
Length = 1221
Score = 24.2 bits (50), Expect = 5.8
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = -2
Query: 266 SMVRIFRRELSGNGG 222
S++ +FRRE SG+GG
Sbjct: 1002 SVIGLFRRESSGSGG 1016
>AJ626713-1|CAF25029.1| 650|Anopheles gambiae tryptophan
transporter protein.
Length = 650
Score = 24.2 bits (50), Expect = 5.8
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -3
Query: 409 LKQIEIN*SIGNV*DLNPTG-EGAFGALVVPLVDPLIGAERPVHSLEIV 266
L I ++ +GNV T E GA V+P + L+ RP++ LE++
Sbjct: 86 LSCIALSVGLGNVWRFPFTALENGGGAFVIPYLIVLLLVGRPIYYLEML 134
>AJ439060-12|CAD27763.1| 450|Anopheles gambiae putative tachykinin
receptor protein.
Length = 450
Score = 24.2 bits (50), Expect = 5.8
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +1
Query: 34 ILKIXDCCWLPFSIEINPRNG*IIISNMPEMIKSP 138
++ I CWLPF I I+ S PE+ K P
Sbjct: 302 VVIIFAVCWLPFQIYF------ILTSYYPELTKKP 330
>DQ230893-2|ABD94312.1| 525|Anopheles gambiae iduronate 2-sulfatase
precursor protein.
Length = 525
Score = 23.8 bits (49), Expect = 7.7
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +2
Query: 251 KYEPCYYFKRVYRSLCPNEWVDKWDNQRAEGTFAGRI*ILNVPDAL 388
K+ P Y FKR + ++ E D W + + R + V DAL
Sbjct: 472 KFNPDY-FKRDWSTIYGEELYDHWIDPQENMNLIDRAPLATVKDAL 516
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 478,892
Number of Sequences: 2352
Number of extensions: 9034
Number of successful extensions: 31
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 103362750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -