Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP16_F_P11
         (945 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024859-18|AAK29974.1|  121|Caenorhabditis elegans Hypothetical...    77   1e-14
Z66495-4|CAA91271.1|  954|Caenorhabditis elegans Hypothetical pr...    32   0.52 
Z78418-3|CAB01697.1|  932|Caenorhabditis elegans Hypothetical pr...    31   0.91 
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr...    31   0.91 
AF000263-15|AAG00018.1|  416|Caenorhabditis elegans Hypothetical...    29   3.7  
AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical ...    29   3.7  
Z80344-2|CAB02487.3|  608|Caenorhabditis elegans Hypothetical pr...    28   8.5  
Z66494-12|CAE17686.1| 1007|Caenorhabditis elegans Hypothetical p...    28   8.5  
Z66494-11|CAA91265.2| 1048|Caenorhabditis elegans Hypothetical p...    28   8.5  
Z54284-8|CAE17775.1| 1007|Caenorhabditis elegans Hypothetical pr...    28   8.5  
Z54284-7|CAA91065.2| 1048|Caenorhabditis elegans Hypothetical pr...    28   8.5  

>AC024859-18|AAK29974.1|  121|Caenorhabditis elegans Hypothetical
           protein Y71H2AM.5 protein.
          Length = 121

 Score = 77.4 bits (182), Expect = 1e-14
 Identities = 26/62 (41%), Positives = 39/62 (62%)
 Frame = +2

Query: 173 FPNQNQTRHCYQSYVDFHRCQKVRGEKYEPCYYFKRVYRSLCPNEWVDKWDNQRAEGTFA 352
           FP   + R C+  YVDFHRC ++ G+ Y+PC +F+ VY+  CP  W ++WD   +EG F 
Sbjct: 57  FPQVRKQRQCFAYYVDFHRCNELMGQDYKPCKFFQNVYKDFCPGFWTERWDELLSEGRFP 116

Query: 353 GR 358
            +
Sbjct: 117 AK 118


>Z66495-4|CAA91271.1|  954|Caenorhabditis elegans Hypothetical
           protein C36A4.5 protein.
          Length = 954

 Score = 32.3 bits (70), Expect = 0.52
 Identities = 20/67 (29%), Positives = 30/67 (44%)
 Frame = +3

Query: 165 PTXSLTKIRRGTATKVTWTSTVARKFAAKNTNHATISRECTGLSAPMSGSTSGTTSAPKA 344
           P  S     RG   K      +A+K  A     A  S+  + +SAP + + + T+SAP A
Sbjct: 395 PAKSAPAPPRGAPAKAAKAEAIAQKKVAGKVQRAAPSKPASAVSAPKATAPASTSSAP-A 453

Query: 345 PSPVGFR 365
            +P   R
Sbjct: 454 TAPEASR 460


>Z78418-3|CAB01697.1|  932|Caenorhabditis elegans Hypothetical
           protein F25D7.4 protein.
          Length = 932

 Score = 31.5 bits (68), Expect = 0.91
 Identities = 20/67 (29%), Positives = 30/67 (44%)
 Frame = +3

Query: 165 PTXSLTKIRRGTATKVTWTSTVARKFAAKNTNHATISRECTGLSAPMSGSTSGTTSAPKA 344
           P  S     RG   K      +A+K  A     A  S+  + +SAP + + + T+SAP A
Sbjct: 373 PARSAPAPPRGAPAKAPKAEPIAQKKVAGKVQRAAPSKPASAVSAPKATAPASTSSAP-A 431

Query: 345 PSPVGFR 365
            +P   R
Sbjct: 432 TAPEASR 438


>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
            K06A9.1b protein.
          Length = 2232

 Score = 31.5 bits (68), Expect = 0.91
 Identities = 18/65 (27%), Positives = 31/65 (47%)
 Frame = +3

Query: 165  PTXSLTKIRRGTATKVTWTSTVARKFAAKNTNHATISRECTGLSAPMSGSTSGTTSAPKA 344
            P  S T       T  T +ST+     + +T H T+S+  +G ++P + S +G+T    +
Sbjct: 1413 PVPSQTSSTPTNPTGSTESSTLLSSTISGSTQHTTMSKASSGSTSPSTNSQTGSTVTMGS 1472

Query: 345  PSPVG 359
             S  G
Sbjct: 1473 SSTSG 1477


>AF000263-15|AAG00018.1|  416|Caenorhabditis elegans Hypothetical
           protein T08B2.11 protein.
          Length = 416

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 17/53 (32%), Positives = 26/53 (49%)
 Frame = +3

Query: 186 IRRGTATKVTWTSTVARKFAAKNTNHATISRECTGLSAPMSGSTSGTTSAPKA 344
           ++ G AT+    S   ++     T H    ++ + LSA + G TSG   APKA
Sbjct: 77  VKEGKATRRKEKSIEKKEHEQPKTTHR---KKKSSLSASLEGKTSGENEAPKA 126


>AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical
           protein Y51B11A.1 protein.
          Length = 1079

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 26/81 (32%), Positives = 35/81 (43%), Gaps = 4/81 (4%)
 Frame = +3

Query: 153 STFRPTXSLTKIRRGTATKVTWTSTVARKFAAKNTNHATISRECTGLSAPMSGSTS---- 320
           ST  P+ S T ++  T T    TST A   +       T +   T  + P S STS    
Sbjct: 85  STEPPSSSTTPVQTTTTTAPETTSTEAPSSSTTPVQTTTTTAPETTSTEPPSSSTSPVQT 144

Query: 321 GTTSAPKAPSPVGFRS*TFPM 383
            TT+AP+  S     S T P+
Sbjct: 145 TTTTAPETTSTEAPSSSTTPV 165


>Z80344-2|CAB02487.3|  608|Caenorhabditis elegans Hypothetical
           protein F15D4.4 protein.
          Length = 608

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 19/84 (22%), Positives = 33/84 (39%)
 Frame = +3

Query: 123 DDQIARRPQNSTFRPTXSLTKIRRGTATKVTWTSTVARKFAAKNTNHATISRECTGLSAP 302
           +D++    +  T   T S T     T T  T TST     +   +  +T +   T  SAP
Sbjct: 507 EDEVDEEDKEETSTTTSSTTSTEASTPTTSTSTSTSTSTPSTTTSTTSTSTTSSTSSSAP 566

Query: 303 MSGSTSGTTSAPKAPSPVGFRS*T 374
           +    + T +  +  +    R+ T
Sbjct: 567 IRAVRTSTPTTRRTTTTTPRRTTT 590


>Z66494-12|CAE17686.1| 1007|Caenorhabditis elegans Hypothetical
           protein D2085.5b protein.
          Length = 1007

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 15/50 (30%), Positives = 22/50 (44%)
 Frame = -2

Query: 446 HILFY*ITSFDLIKTNRNKLKHRERLGSKSYRRRCLRRAGCPTCRPTHWG 297
           H LF    + D++    +KL+    +     RR CLR      C PT +G
Sbjct: 136 HFLF----ALDIVMIESSKLRLHPSISEVEVRRACLRALSSVICWPTTFG 181


>Z66494-11|CAA91265.2| 1048|Caenorhabditis elegans Hypothetical
           protein D2085.5a protein.
          Length = 1048

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 15/50 (30%), Positives = 22/50 (44%)
 Frame = -2

Query: 446 HILFY*ITSFDLIKTNRNKLKHRERLGSKSYRRRCLRRAGCPTCRPTHWG 297
           H LF    + D++    +KL+    +     RR CLR      C PT +G
Sbjct: 177 HFLF----ALDIVMIESSKLRLHPSISEVEVRRACLRALSSVICWPTTFG 222


>Z54284-8|CAE17775.1| 1007|Caenorhabditis elegans Hypothetical
           protein D2085.5b protein.
          Length = 1007

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 15/50 (30%), Positives = 22/50 (44%)
 Frame = -2

Query: 446 HILFY*ITSFDLIKTNRNKLKHRERLGSKSYRRRCLRRAGCPTCRPTHWG 297
           H LF    + D++    +KL+    +     RR CLR      C PT +G
Sbjct: 136 HFLF----ALDIVMIESSKLRLHPSISEVEVRRACLRALSSVICWPTTFG 181


>Z54284-7|CAA91065.2| 1048|Caenorhabditis elegans Hypothetical
           protein D2085.5a protein.
          Length = 1048

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 15/50 (30%), Positives = 22/50 (44%)
 Frame = -2

Query: 446 HILFY*ITSFDLIKTNRNKLKHRERLGSKSYRRRCLRRAGCPTCRPTHWG 297
           H LF    + D++    +KL+    +     RR CLR      C PT +G
Sbjct: 177 HFLF----ALDIVMIESSKLRLHPSISEVEVRRACLRALSSVICWPTTFG 222


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,454,276
Number of Sequences: 27780
Number of extensions: 200722
Number of successful extensions: 719
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 670
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 714
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2444174194
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)